RNA–Protein interactions for RNA: ENST00000319410.9

KARS-202, Transcript of lysyl-tRNA synthetase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KARS, Length 2,421 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-202ENST00000319410 NOS1P29475 1434 aa14.08□□□□□ -0.16
KARS-202ENST00000319410 ARHGAP23Q9P227 1491 aa14.07□□□□□ -0.16
KARS-202ENST00000319410 UNC13BO14795 1591 aa14.06□□□□□ -0.16
KARS-202ENST00000319410 SLIT1O75093 1534 aa14.06□□□□□ -0.16
KARS-202ENST00000319410 STRCP1A6NGW2 1772 aa14.06□□□□□ -0.16
KARS-202ENST00000319410 TMEM2Q9UHN6 1383 aa14.06□□□□□ -0.16
KARS-202ENST00000319410 EID1Q9Y6B2 187 aa14.05□□□□□ -0.16
KARS-202ENST00000319410 TET3O43151 1660 aa14.05□□□□□ -0.16
KARS-202ENST00000319410 PIP4K2BP78356 416 aa14.05□□□□□ -0.16
KARS-202ENST00000319410 CPS1P31327 1500 aa14.04□□□□□ -0.16
KARS-202ENST00000319410 NUP155O75694 1391 aa14.04□□□□□ -0.16
KARS-202ENST00000319410 E9PCH4 1651 aa14.03□□□□□ -0.16
KARS-202ENST00000319410 ADGRB3O60242 1522 aa14.02□□□□□ -0.16
KARS-202ENST00000319410 CHGAP10645 457 aaKnown RBP14.02□□□□□ -0.16
KARS-202ENST00000319410 SLC26A8Q96RN1 970 aa14.02□□□□□ -0.16
KARS-202ENST00000319410 RPRD2Q5VT52 1461 aaKnown RBP14.02□□□□□ -0.16
KARS-202ENST00000319410 SLC52A1Q9NWF4 448 aa14.02□□□□□ -0.17
KARS-202ENST00000319410 SETD5Q9C0A6 1442 aa14.01□□□□□ -0.17
KARS-202ENST00000319410 MYO5BQ9ULV0 1848 aa14.01□□□□□ -0.17
KARS-202ENST00000319410 PLEKHG5O94827 1062 aa14.01□□□□□ -0.17
KARS-202ENST00000319410 IQGAP3Q86VI3 1631 aa14.01□□□□□ -0.17
KARS-202ENST00000319410 NUTM2DQ5VT03 806 aaPredicted RBP14□□□□□ -0.17
KARS-202ENST00000319410 BCANQ96GW7 911 aa14□□□□□ -0.17
KARS-202ENST00000319410 PKNOX2Q96KN3 472 aa14□□□□□ -0.17
KARS-202ENST00000319410 PODXL2Q9NZ53 605 aa14□□□□□ -0.17
KARS-202ENST00000319410 LRRC7Q96NW7 1537 aa14□□□□□ -0.17
KARS-202ENST00000319410 KDM5AP29375 1690 aaKnown RBP13.99□□□□□ -0.17
KARS-202ENST00000319410 RBM33Q96EV2 1170 aaKnown RBP13.99□□□□□ -0.17
KARS-202ENST00000319410 TOM1O60784 492 aa13.98□□□□□ -0.17
KARS-202ENST00000319410 TMEM131LA2VDJ0 1609 aa13.97□□□□□ -0.17
KARS-202ENST00000319410 DISP3Q9P2K9 1392 aa13.97□□□□□ -0.17
KARS-202ENST00000319410 ALKQ9UM73 1620 aa13.96□□□□□ -0.17
KARS-202ENST00000319410 PPP1R15AO75807 674 aaPredicted RBP13.96□□□□□ -0.17
KARS-202ENST00000319410 HSPA1LP34931 641 aa13.96□□□□□ -0.17
KARS-202ENST00000319410 RIMS2Q9UQ26 1411 aa13.95□□□□□ -0.18
KARS-202ENST00000319410 SALL2Q9Y467 1007 aaPredicted RBP13.95□□□□□ -0.18
KARS-202ENST00000319410 ZFYVE9O95405 1425 aa13.95□□□□□ -0.18
KARS-202ENST00000319410 RAB3GAP2Q9H2M9 1393 aa13.93□□□□□ -0.18
KARS-202ENST00000319410 TRIM52Q96A61 297 aa13.93□□□□□ -0.18
KARS-202ENST00000319410 XIRP1Q702N8 1843 aaKnown RBP13.93□□□□□ -0.18
KARS-202ENST00000319410 TMEM94Q12767 1356 aa13.91□□□□□ -0.18
KARS-202ENST00000319410 KCNA6P17658 529 aa13.91□□□□□ -0.18
KARS-202ENST00000319410 SUPT16HQ9Y5B9 1047 aaKnown RBP13.91□□□□□ -0.18
KARS-202ENST00000319410 SPHKAPQ2M3C7 1700 aa13.9□□□□□ -0.18
KARS-202ENST00000319410 PLEKHG1Q9ULL1 1385 aa13.9□□□□□ -0.18
KARS-202ENST00000319410 PROSER2Q86WR7 435 aaPredicted RBP13.9□□□□□ -0.18
KARS-202ENST00000319410 ILDR2Q71H61 639 aa13.9□□□□□ -0.18
KARS-202ENST00000319410 HDGFP51858 240 aaKnown RBP13.88□□□□□ -0.19
KARS-202ENST00000319410 ZNF326Q5BKZ1 582 aaKnown RBP13.88□□□□□ -0.19
KARS-202ENST00000319410 SLC4A1APQ9BWU0 796 aaKnown RBP13.88□□□□□ -0.19
KARS-202ENST00000319410 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.87□□□□□ -0.19
KARS-202ENST00000319410 CLTCL1P53675 1640 aa13.87□□□□□ -0.19
KARS-202ENST00000319410 FOXD1Q16676 465 aa13.86□□□□□ -0.19
KARS-202ENST00000319410 MPHOSPH9Q99550 1183 aa13.86□□□□□ -0.19
KARS-202ENST00000319410 ADAMTS13Q76LX8 1427 aa13.86□□□□□ -0.19
KARS-202ENST00000319410 NWD1Q149M9 1564 aa13.85□□□□□ -0.19
KARS-202ENST00000319410 YTHDC1Q96MU7 727 aaKnown RBP13.85□□□□□ -0.19
KARS-202ENST00000319410 TBX22Q9Y458 520 aa13.84□□□□□ -0.19
KARS-202ENST00000319410 CHD2O14647 1828 aaKnown RBP13.84□□□□□ -0.19
KARS-202ENST00000319410 NKTRP30414 1462 aaKnown RBP13.83□□□□□ -0.19
KARS-202ENST00000319410 TRPM2O94759 1503 aa13.83□□□□□ -0.19
KARS-202ENST00000319410 CCDC136Q96JN2 1154 aa13.82□□□□□ -0.2
KARS-202ENST00000319410 C14orf37Q86TY3 774 aa13.81□□□□□ -0.2
KARS-202ENST00000319410 PTPRUQ92729 1446 aa13.81□□□□□ -0.2
KARS-202ENST00000319410 NRXN3Q9Y4C0 1643 aa13.8□□□□□ -0.2
KARS-202ENST00000319410 MSH6P52701 1360 aa13.8□□□□□ -0.2
KARS-202ENST00000319410 MED1Q15648 1581 aaPredicted RBP13.8□□□□□ -0.2
KARS-202ENST00000319410 DEKP35659 375 aaKnown RBP13.8□□□□□ -0.2
KARS-202ENST00000319410 AMOTL2Q9Y2J4 779 aa13.8□□□□□ -0.2
KARS-202ENST00000319410 NEXMIFQ5QGS0 1516 aa13.79□□□□□ -0.2
KARS-202ENST00000319410 KIF1BO60333 1816 aa13.79□□□□□ -0.2
KARS-202ENST00000319410 DIP2AQ14689 1571 aa13.79□□□□□ -0.2
KARS-202ENST00000319410 ROBO1Q9Y6N7 1651 aa13.78□□□□□ -0.2
KARS-202ENST00000319410 METP08581 1390 aa13.78□□□□□ -0.2
KARS-202ENST00000319410 SLAIN2Q9P270 581 aa13.77□□□□□ -0.21
KARS-202ENST00000319410 FAM135BQ49AJ0 1406 aa13.76□□□□□ -0.21
KARS-202ENST00000319410 SETBP1Q9Y6X0 1596 aa13.76□□□□□ -0.21
KARS-202ENST00000319410 PIK3R4Q99570 1358 aa13.75□□□□□ -0.21
KARS-202ENST00000319410 RGL3Q3MIN7 710 aa13.74□□□□□ -0.21
KARS-202ENST00000319410 ANKRD30BQ9BXX2 1392 aa13.74□□□□□ -0.21
KARS-202ENST00000319410 CCDC144AA2RUR9 1427 aa13.74□□□□□ -0.21
KARS-202ENST00000319410 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.73□□□□□ -0.21
KARS-202ENST00000319410 PHF23Q9BUL5 403 aaPredicted RBP13.73□□□□□ -0.21
KARS-202ENST00000319410 XRN1Q8IZH2 1706 aaKnown RBP13.73□□□□□ -0.21
KARS-202ENST00000319410 NEFLP07196 543 aa13.72□□□□□ -0.21
KARS-202ENST00000319410 ATF3P18847 181 aa13.72□□□□□ -0.21
KARS-202ENST00000319410 C19orf44Q9H6X5 657 aa13.72□□□□□ -0.21
KARS-202ENST00000319410 RBM19Q9Y4C8 960 aaKnown RBP13.72□□□□□ -0.21
KARS-202ENST00000319410 RPGRIP1LQ68CZ1 1315 aa13.72□□□□□ -0.21
KARS-202ENST00000319410 VGFO15240 615 aaPredicted RBP13.71□□□□□ -0.21
KARS-202ENST00000319410 CADPS2Q86UW7 1296 aa13.7□□□□□ -0.22
KARS-202ENST00000319410 SOCS7O14512 581 aa13.7□□□□□ -0.22
KARS-202ENST00000319410 PHLPP1O60346 1717 aa13.69□□□□□ -0.22
KARS-202ENST00000319410 PPLO60437 1756 aa13.69□□□□□ -0.22
KARS-202ENST00000319410 NCOA3Q9Y6Q9 1424 aa13.69□□□□□ -0.22
KARS-202ENST00000319410 ADGRF5Q8IZF2 1346 aa13.69□□□□□ -0.22
KARS-202ENST00000319410 DHX57Q6P158 1386 aaKnown RBP13.69□□□□□ -0.22
KARS-202ENST00000319410 SPATA31E1Q6ZUB1 1445 aa13.68□□□□□ -0.22
KARS-202ENST00000319410 SETD1AO15047 1707 aaKnown RBP13.68□□□□□ -0.22
KARS-202ENST00000319410 ROBO2Q9HCK4 1378 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms