RNA–Protein interactions for RNA: ENST00000318524.6

NFX1-201, Transcript of nuclear transcription factor, X-box binding 1, humanhuman

TSL 1 (best) BASIC

Gene NFX1, Length 3,513 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFX1-201ENST00000318524 MLH3Q9UHC1 1453 aa8.78□□□□□ -1
NFX1-201ENST00000318524 TIMELESSQ9UNS1 1208 aa8.77□□□□□ -1
NFX1-201ENST00000318524 CCDC7Q96M83 1385 aa8.77□□□□□ -1.01
NFX1-201ENST00000318524 E9PCH4 1651 aa8.77□□□□□ -1.01
NFX1-201ENST00000318524 TMF1P82094 1093 aa8.77□□□□□ -1.01
NFX1-201ENST00000318524 MAP3K4Q9Y6R4 1608 aa8.77□□□□□ -1.01
NFX1-201ENST00000318524 INO80Q9ULG1 1556 aaPredicted RBP8.76□□□□□ -1.01
NFX1-201ENST00000318524 GOLGB1Q14789 3259 aaKnown RBP8.76□□□□□ -1.01
NFX1-201ENST00000318524 PAK3O75914 559 aaPredicted RBP8.76□□□□□ -1.01
NFX1-201ENST00000318524 SIGLEC1Q9BZZ2 1709 aa8.76□□□□□ -1.01
NFX1-201ENST00000318524 GGNBP2Q9H3C7 697 aa8.75□□□□□ -1.01
NFX1-201ENST00000318524 PPRC1Q5VV67 1664 aaKnown RBP8.75□□□□□ -1.01
NFX1-201ENST00000318524 GTF3C3Q9Y5Q9 886 aa8.75□□□□□ -1.01
NFX1-201ENST00000318524 EID1Q9Y6B2 187 aa8.75□□□□□ -1.01
NFX1-201ENST00000318524 PRAG1Q86YV5 1406 aa8.75□□□□□ -1.01
NFX1-201ENST00000318524 CLTCL1P53675 1640 aa8.75□□□□□ -1.01
NFX1-201ENST00000318524 ADRA2BP18089 450 aa8.74□□□□□ -1.01
NFX1-201ENST00000318524 CCDC146Q8IYE0 955 aa8.74□□□□□ -1.01
NFX1-201ENST00000318524 SLC52A1Q9NWF4 448 aa8.74□□□□□ -1.01
NFX1-201ENST00000318524 ZRANB1Q9UGI0 708 aa8.74□□□□□ -1.01
NFX1-201ENST00000318524 KNSTRNQ9Y448 316 aa8.74□□□□□ -1.01
NFX1-201ENST00000318524 PLEKHH1Q9ULM0 1364 aa8.74□□□□□ -1.01
NFX1-201ENST00000318524 CENPJQ9HC77 1338 aaPredicted RBP8.74□□□□□ -1.01
NFX1-201ENST00000318524 ABCC3O15438 1527 aa8.74□□□□□ -1.01
NFX1-201ENST00000318524 DDX17Q92841 729 aaKnown RBP8.74□□□□□ -1.01
NFX1-201ENST00000318524 RICTORQ6R327 1708 aa8.74□□□□□ -1.01
NFX1-201ENST00000318524 PLXNC1O60486 1568 aa8.73□□□□□ -1.01
NFX1-201ENST00000318524 TNRQ92752 1358 aa8.73□□□□□ -1.01
NFX1-201ENST00000318524 TESK2Q96S53 571 aa8.73□□□□□ -1.01
NFX1-201ENST00000318524 CABP1Q9NZU7 370 aa8.73□□□□□ -1.01
NFX1-201ENST00000318524 CLTCQ00610 1675 aaKnown RBP8.73□□□□□ -1.01
NFX1-201ENST00000318524 CENPBP07199 599 aaPredicted RBP8.72□□□□□ -1.01
NFX1-201ENST00000318524 PRKRIP1Q9H875 184 aaPredicted RBP8.72□□□□□ -1.01
NFX1-201ENST00000318524 SPATA31E1Q6ZUB1 1445 aa8.72□□□□□ -1.01
NFX1-201ENST00000318524 KDM5CP41229 1560 aa8.71□□□□□ -1.01
NFX1-201ENST00000318524 BCL11AQ9H165 835 aa8.71□□□□□ -1.01
NFX1-201ENST00000318524 UHRF1BP1Q6BDS2 1440 aa8.71□□□□□ -1.01
NFX1-201ENST00000318524 SLC24A1O60721 1099 aa8.71□□□□□ -1.02
NFX1-201ENST00000318524 AMOTL2Q9Y2J4 779 aa8.71□□□□□ -1.02
NFX1-201ENST00000318524 MROH1Q8NDA8 1641 aa8.71□□□□□ -1.02
NFX1-201ENST00000318524 KCNA6P17658 529 aa8.71□□□□□ -1.02
NFX1-201ENST00000318524 CDK19Q9BWU1 502 aa8.71□□□□□ -1.02
NFX1-201ENST00000318524 RRP7AQ9Y3A4 280 aaKnown RBP8.71□□□□□ -1.02
NFX1-201ENST00000318524 METP08581 1390 aa8.7□□□□□ -1.02
NFX1-201ENST00000318524 ARAP3Q8WWN8 1544 aa8.7□□□□□ -1.02
NFX1-201ENST00000318524 LTV1Q96GA3 475 aaPredicted RBP8.7□□□□□ -1.02
NFX1-201ENST00000318524 C14orf93Q9H972 538 aaKnown RBP8.7□□□□□ -1.02
NFX1-201ENST00000318524 IQGAP3Q86VI3 1631 aa8.7□□□□□ -1.02
NFX1-201ENST00000318524 EFCAB6Q5THR3 1501 aa8.69□□□□□ -1.02
NFX1-201ENST00000318524 UNC13BO14795 1591 aa8.69□□□□□ -1.02
NFX1-201ENST00000318524 RIMS2Q9UQ26 1411 aa8.69□□□□□ -1.02
NFX1-201ENST00000318524 U2SURPO15042 1029 aaKnown RBP8.69□□□□□ -1.02
NFX1-201ENST00000318524 CFAP74Q9C0B2 1584 aa8.68□□□□□ -1.02
NFX1-201ENST00000318524 THEMISQ8N1K5 641 aaPredicted RBP8.68□□□□□ -1.02
NFX1-201ENST00000318524 KDM5DQ9BY66 1539 aa8.68□□□□□ -1.02
NFX1-201ENST00000318524 CARD14Q9BXL6 1004 aa8.67□□□□□ -1.02
NFX1-201ENST00000318524 RNF17Q9BXT8 1623 aaKnown RBP8.67□□□□□ -1.02
NFX1-201ENST00000318524 GLI2P10070 1586 aa8.67□□□□□ -1.02
NFX1-201ENST00000318524 NGDNQ8NEJ9 315 aaKnown RBP8.67□□□□□ -1.02
NFX1-201ENST00000318524 ACIN1Q9UKV3 1341 aaKnown RBP8.67□□□□□ -1.02
NFX1-201ENST00000318524 MYO5BQ9ULV0 1848 aa8.67□□□□□ -1.02
NFX1-201ENST00000318524 BCORL1Q5H9F3 1711 aa8.67□□□□□ -1.02
NFX1-201ENST00000318524 KDM4FA0A1W2PPD8 638 aa8.67□□□□□ -1.02
NFX1-201ENST00000318524 MORC1Q86VD1 984 aa8.67□□□□□ -1.02
NFX1-201ENST00000318524 SPHKAPQ2M3C7 1700 aa8.66□□□□□ -1.02
NFX1-201ENST00000318524 ERVK-7P63135 1459 aa8.66□□□□□ -1.02
NFX1-201ENST00000318524 RRS1Q15050 365 aaKnown RBP8.66□□□□□ -1.02
NFX1-201ENST00000318524 MROH2AA6NES4 1674 aa8.66□□□□□ -1.02
NFX1-201ENST00000318524 FOXO3O43524 673 aa8.66□□□□□ -1.02
NFX1-201ENST00000318524 ANKLE2Q86XL3 938 aa8.66□□□□□ -1.02
NFX1-201ENST00000318524 ESCO1Q5FWF5 840 aa8.66□□□□□ -1.02
NFX1-201ENST00000318524 PROSER2Q86WR7 435 aaPredicted RBP8.66□□□□□ -1.02
NFX1-201ENST00000318524 PTPRTO14522 1441 aa8.65□□□□□ -1.02
NFX1-201ENST00000318524 TET3O43151 1660 aa8.65□□□□□ -1.02
NFX1-201ENST00000318524 SYNMO15061 1565 aa8.65□□□□□ -1.02
NFX1-201ENST00000318524 NME9Q86XW9 330 aa8.65□□□□□ -1.02
NFX1-201ENST00000318524 TRPM2O94759 1503 aa8.65□□□□□ -1.02
NFX1-201ENST00000318524 CAMSAP1Q5T5Y3 1602 aa8.64□□□□□ -1.03
NFX1-201ENST00000318524 CNTLNQ9NXG0 1405 aa8.64□□□□□ -1.03
NFX1-201ENST00000318524 RALGAPBQ86X10 1494 aa8.64□□□□□ -1.03
NFX1-201ENST00000318524 EVC2Q86UK5 1308 aa8.64□□□□□ -1.03
NFX1-201ENST00000318524 MAGI2Q86UL8 1455 aa8.63□□□□□ -1.03
NFX1-201ENST00000318524 A0A0G2JS52 829 aa8.63□□□□□ -1.03
NFX1-201ENST00000318524 HMOX1P09601 288 aa8.63□□□□□ -1.03
NFX1-201ENST00000318524 ORAI2Q96SN7 254 aa8.63□□□□□ -1.03
NFX1-201ENST00000318524 HDGFP51858 240 aaKnown RBP8.63□□□□□ -1.03
NFX1-201ENST00000318524 PIP4K2BP78356 416 aa8.63□□□□□ -1.03
NFX1-201ENST00000318524 NUDT16Q96DE0 195 aaKnown RBP8.63□□□□□ -1.03
NFX1-201ENST00000318524 ARHGEF40Q8TER5 1519 aa8.62□□□□□ -1.03
NFX1-201ENST00000318524 TMEM2Q9UHN6 1383 aa8.62□□□□□ -1.03
NFX1-201ENST00000318524 CABLES1Q8TDN4 633 aa8.62□□□□□ -1.03
NFX1-201ENST00000318524 KIF1BO60333 1816 aa8.62□□□□□ -1.03
NFX1-201ENST00000318524 WDR43Q15061 677 aaKnown RBP eCLIP8.62□□□□□ -1.03
NFX1-201ENST00000318524 SUPT16HQ9Y5B9 1047 aaKnown RBP8.62□□□□□ -1.03
NFX1-201ENST00000318524 UTRNP46939 3433 aa8.62□□□□□ -1.03
NFX1-201ENST00000318524 MADDQ8WXG6 1647 aa8.62□□□□□ -1.03
NFX1-201ENST00000318524 RIMS1Q86UR5 1692 aaKnown RBP8.61□□□□□ -1.03
NFX1-201ENST00000318524 A2ML1A8K2U0 1454 aa8.61□□□□□ -1.03
NFX1-201ENST00000318524 EIF3AQ14152 1382 aaKnown RBP8.61□□□□□ -1.03
NFX1-201ENST00000318524 ROBO2Q9HCK4 1378 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms