RNA–Protein interactions for RNA: ENST00000317555.6

PGAM5-201, Transcript of PGAM family member 5, mitochondrial serine/threonine protein phosphatase, humanhuman

TSL 1 (best) BASIC

Gene PGAM5, Length 1,182 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGAM5-201ENST00000317555 PPP1R15AO75807 674 aaPredicted RBP40.26■■■■■ 4.04
PGAM5-201ENST00000317555 BCANQ96GW7 911 aa40.26■■■■■ 4.04
PGAM5-201ENST00000317555 SLC26A8Q96RN1 970 aa40.26■■■■■ 4.04
PGAM5-201ENST00000317555 TRIM52Q96A61 297 aa40.25■■■■■ 4.03
PGAM5-201ENST00000317555 PLEKHG1Q9ULL1 1385 aa40.23■■■■■ 4.03
PGAM5-201ENST00000317555 ABCF1Q8NE71 845 aaKnown RBP eCLIP40.23■■■■■ 4.03
PGAM5-201ENST00000317555 SCAF1Q9H7N4 1312 aaKnown RBP40.17■■■■■ 4.02
PGAM5-201ENST00000317555 KCNA6P17658 529 aa40.16■■■■■ 4.02
PGAM5-201ENST00000317555 PIP4K2BP78356 416 aa40.16■■■■■ 4.02
PGAM5-201ENST00000317555 SENP3Q9H4L4 574 aaPredicted RBP40.16■■■■■ 4.02
PGAM5-201ENST00000317555 TRPM2O94759 1503 aa40.16■■■■■ 4.02
PGAM5-201ENST00000317555 XIRP1Q702N8 1843 aaKnown RBP40.15■■■■■ 4.02
PGAM5-201ENST00000317555 CLTCL1P53675 1640 aa40.13■■■■■ 4.01
PGAM5-201ENST00000317555 NUTM2DQ5VT03 806 aaPredicted RBP40.11■■■■■ 4.01
PGAM5-201ENST00000317555 SLC4A1APQ9BWU0 796 aaKnown RBP40.11■■■■■ 4.01
PGAM5-201ENST00000317555 ALKQ9UM73 1620 aa40.11■■■■■ 4.01
PGAM5-201ENST00000317555 NWD1Q149M9 1564 aa40.1■■■■■ 4.01
PGAM5-201ENST00000317555 KIF1BO60333 1816 aa40.07■■■■■ 4
PGAM5-201ENST00000317555 NKTRP30414 1462 aaKnown RBP40.07■■■■■ 4
PGAM5-201ENST00000317555 CHD2O14647 1828 aaKnown RBP40.05■■■■■ 4
PGAM5-201ENST00000317555 ZNF326Q5BKZ1 582 aaKnown RBP40.05■■■■■ 4
PGAM5-201ENST00000317555 TBX22Q9Y458 520 aa40.04■■■■■ 4
PGAM5-201ENST00000317555 DIP2AQ14689 1571 aa40.04■■■■■ 4
PGAM5-201ENST00000317555 TMEM94Q12767 1356 aa40.03■■■■■ 4
PGAM5-201ENST00000317555 ADAMTS13Q76LX8 1427 aa40.02■■■■■ 4
PGAM5-201ENST00000317555 PROSER2Q86WR7 435 aaPredicted RBP40.02■■■■■ 4
PGAM5-201ENST00000317555 HSPA1LP34931 641 aa39.95■■■■□ 3.99
PGAM5-201ENST00000317555 PIK3R4Q99570 1358 aa39.93■■■■□ 3.98
PGAM5-201ENST00000317555 NEXMIFQ5QGS0 1516 aa39.92■■■■□ 3.98
PGAM5-201ENST00000317555 RBM33Q96EV2 1170 aaKnown RBP39.92■■■■□ 3.98
PGAM5-201ENST00000317555 SETBP1Q9Y6X0 1596 aa39.9■■■■□ 3.98
PGAM5-201ENST00000317555 NRXN3Q9Y4C0 1643 aa39.9■■■■□ 3.98
PGAM5-201ENST00000317555 SETD5Q9C0A6 1442 aa39.9■■■■□ 3.98
PGAM5-201ENST00000317555 ACIN1Q9UKV3 1341 aaKnown RBP39.9■■■■□ 3.98
PGAM5-201ENST00000317555 FOXD1Q16676 465 aa39.87■■■■□ 3.97
PGAM5-201ENST00000317555 MPHOSPH9Q99550 1183 aa39.87■■■■□ 3.97
PGAM5-201ENST00000317555 DISP3Q9P2K9 1392 aa39.85■■■■□ 3.97
PGAM5-201ENST00000317555 MSH6P52701 1360 aa39.84■■■■□ 3.97
PGAM5-201ENST00000317555 NCOA3Q9Y6Q9 1424 aa39.78■■■■□ 3.96
PGAM5-201ENST00000317555 CCDC144AA2RUR9 1427 aa39.77■■■■□ 3.96
PGAM5-201ENST00000317555 PTPRUQ92729 1446 aa39.77■■■■□ 3.96
PGAM5-201ENST00000317555 AMOTL2Q9Y2J4 779 aa39.77■■■■□ 3.96
PGAM5-201ENST00000317555 RPGRIP1LQ68CZ1 1315 aa39.76■■■■□ 3.96
PGAM5-201ENST00000317555 RAB3GAP2Q9H2M9 1393 aa39.75■■■■□ 3.95
PGAM5-201ENST00000317555 FAM135BQ49AJ0 1406 aa39.74■■■■□ 3.95
PGAM5-201ENST00000317555 VGFO15240 615 aaPredicted RBP39.74■■■■□ 3.95
PGAM5-201ENST00000317555 PPLO60437 1756 aa39.74■■■■□ 3.95
PGAM5-201ENST00000317555 XRN1Q8IZH2 1706 aaKnown RBP39.73■■■■□ 3.95
PGAM5-201ENST00000317555 C14orf37Q86TY3 774 aa39.72■■■■□ 3.95
PGAM5-201ENST00000317555 METP08581 1390 aa39.71■■■■□ 3.95
PGAM5-201ENST00000317555 ROBO1Q9Y6N7 1651 aa39.69■■■■□ 3.94
PGAM5-201ENST00000317555 SIPA1L2Q9P2F8 1722 aaPredicted RBP39.64■■■■□ 3.94
PGAM5-201ENST00000317555 SLAIN2Q9P270 581 aa39.63■■■■□ 3.93
PGAM5-201ENST00000317555 SPATA31E1Q6ZUB1 1445 aa39.62■■■■□ 3.93
PGAM5-201ENST00000317555 SETD1AO15047 1707 aaKnown RBP39.62■■■■□ 3.93
PGAM5-201ENST00000317555 C19orf44Q9H6X5 657 aa39.61■■■■□ 3.93
PGAM5-201ENST00000317555 MED1Q15648 1581 aaPredicted RBP39.6■■■■□ 3.93
PGAM5-201ENST00000317555 RGL3Q3MIN7 710 aa39.59■■■■□ 3.93
PGAM5-201ENST00000317555 CADPS2Q86UW7 1296 aa39.58■■■■□ 3.93
PGAM5-201ENST00000317555 IFT172Q9UG01 1749 aa39.57■■■■□ 3.92
PGAM5-201ENST00000317555 ATF3P18847 181 aa39.56■■■■□ 3.92
PGAM5-201ENST00000317555 ANKRD30BQ9BXX2 1392 aa39.52■■■■□ 3.92
PGAM5-201ENST00000317555 DCCP43146 1447 aa39.5■■■■□ 3.91
PGAM5-201ENST00000317555 HRCP23327 699 aa39.49■■■■□ 3.91
PGAM5-201ENST00000317555 ADGRF5Q8IZF2 1346 aa39.48■■■■□ 3.91
PGAM5-201ENST00000317555 ILDR2Q71H61 639 aa39.48■■■■□ 3.91
PGAM5-201ENST00000317555 PHLPP1O60346 1717 aa39.46■■■■□ 3.91
PGAM5-201ENST00000317555 PTCH1Q13635 1447 aa39.46■■■■□ 3.91
PGAM5-201ENST00000317555 ADGRL3Q9HAR2 1447 aa39.44■■■■□ 3.9
PGAM5-201ENST00000317555 NALCNQ8IZF0 1738 aa39.43■■■■□ 3.9
PGAM5-201ENST00000317555 PRAG1Q86YV5 1406 aa39.41■■■■□ 3.9
PGAM5-201ENST00000317555 ROBO2Q9HCK4 1378 aa39.39■■■■□ 3.9
PGAM5-201ENST00000317555 PIK3C2GO75747 1445 aa39.37■■■■□ 3.89
PGAM5-201ENST00000317555 PHF23Q9BUL5 403 aaPredicted RBP39.35■■■■□ 3.89
PGAM5-201ENST00000317555 MST1RQ04912 1400 aa39.34■■■■□ 3.89
PGAM5-201ENST00000317555 COL16A1Q07092 1604 aaPredicted RBP39.32■■■■□ 3.89
PGAM5-201ENST00000317555 AHDC1Q5TGY3 1603 aaPredicted RBP39.32■■■■□ 3.89
PGAM5-201ENST00000317555 BRINP3Q76B58 766 aa39.31■■■■□ 3.88
PGAM5-201ENST00000317555 MYOM2P54296 1465 aa39.3■■■■□ 3.88
PGAM5-201ENST00000317555 ASXL1Q8IXJ9 1541 aa39.27■■■■□ 3.88
PGAM5-201ENST00000317555 NRXN1Q9ULB1 1477 aa39.27■■■■□ 3.88
PGAM5-201ENST00000317555 JCADQ9P266 1359 aa39.26■■■■□ 3.88
PGAM5-201ENST00000317555 LRPPRCP42704 1394 aaKnown RBP39.24■■■■□ 3.87
PGAM5-201ENST00000317555 STK26Q9P289 416 aa39.24■■■■□ 3.87
PGAM5-201ENST00000317555 TECPR2O15040 1411 aa39.23■■■■□ 3.87
PGAM5-201ENST00000317555 KNDC1Q76NI1 1749 aa39.23■■■■□ 3.87
PGAM5-201ENST00000317555 LAMC1P11047 1609 aa39.23■■■■□ 3.87
PGAM5-201ENST00000317555 TMEM132EQ6IEE7 984 aa39.23■■■■□ 3.87
PGAM5-201ENST00000317555 C14orf93Q9H972 538 aaKnown RBP39.2■■■■□ 3.87
PGAM5-201ENST00000317555 ABCC11Q96J66 1382 aa39.2■■■■□ 3.87
PGAM5-201ENST00000317555 NHSL1Q5SYE7 1610 aa39.18■■■■□ 3.86
PGAM5-201ENST00000317555 C1orf167Q5SNV9 1468 aa39.17■■■■□ 3.86
PGAM5-201ENST00000317555 YTHDC2Q9H6S0 1430 aaKnown RBP39.17■■■■□ 3.86
PGAM5-201ENST00000317555 SOCS7O14512 581 aa39.14■■■■□ 3.86
PGAM5-201ENST00000317555 CFAP70Q5T0N1 1121 aa39.14■■■■□ 3.86
PGAM5-201ENST00000317555 SHPRHQ149N8 1683 aa39.13■■■■□ 3.86
PGAM5-201ENST00000317555 CDC42BPGQ6DT37 1551 aa39.13■■■■□ 3.85
PGAM5-201ENST00000317555 WAPLQ7Z5K2 1190 aa39.12■■■■□ 3.85
PGAM5-201ENST00000317555 DHX57Q6P158 1386 aaKnown RBP39.1■■■■□ 3.85
PGAM5-201ENST00000317555 DCAF11Q8TEB1 546 aa39.1■■■■□ 3.85
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms