RNA–Protein interactions for RNA: ENST00000314567.7

CDPF1-201, Transcript of cysteine rich DPF motif domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CDPF1, Length 1,875 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDPF1-201ENST00000314567 MYO3AQ8NEV4 1616 aa35.11■■■■□ 3.21
CDPF1-201ENST00000314567 UBR1Q8IWV7 1749 aa35.11■■■■□ 3.21
CDPF1-201ENST00000314567 NLRP1Q9C000 1473 aa35.1■■■■□ 3.21
CDPF1-201ENST00000314567 MYOM2P54296 1465 aa35.07■■■■□ 3.2
CDPF1-201ENST00000314567 RPGRIP1LQ68CZ1 1315 aa35.07■■■■□ 3.2
CDPF1-201ENST00000314567 MIER1Q8N108 512 aa35.06■■■■□ 3.2
CDPF1-201ENST00000314567 TRPM1Q7Z4N2 1603 aa35.06■■■■□ 3.2
CDPF1-201ENST00000314567 EIF4G2P78344 907 aaKnown RBP eCLIP35.05■■■■□ 3.2
CDPF1-201ENST00000314567 NBPF1Q3BBV0 1214 aa35.04■■■■□ 3.2
CDPF1-201ENST00000314567 RALGAPBQ86X10 1494 aa35.03■■■■□ 3.2
CDPF1-201ENST00000314567 HIRIP3Q9BW71 556 aaPredicted RBP35.03■■■■□ 3.2
CDPF1-201ENST00000314567 NRXN1Q9ULB1 1477 aa35■■■■□ 3.19
CDPF1-201ENST00000314567 RIMS2Q9UQ26 1411 aa35■■■■□ 3.19
CDPF1-201ENST00000314567 KDM5AP29375 1690 aaKnown RBP34.99■■■■□ 3.19
CDPF1-201ENST00000314567 HSPA5P11021 654 aaKnown RBP34.99■■■■□ 3.19
CDPF1-201ENST00000314567 STAC3Q96MF2 364 aa34.98■■■■□ 3.19
CDPF1-201ENST00000314567 CEP170BQ9Y4F5 1589 aaPredicted RBP34.98■■■■□ 3.19
CDPF1-201ENST00000314567 SETD1BQ9UPS6 1966 aaKnown RBP34.97■■■■□ 3.19
CDPF1-201ENST00000314567 ROCK2O75116 1388 aaKnown RBP34.97■■■■□ 3.19
CDPF1-201ENST00000314567 CFAP70Q5T0N1 1121 aa34.97■■■■□ 3.19
CDPF1-201ENST00000314567 ZFYVE9O95405 1425 aa34.96■■■■□ 3.19
CDPF1-201ENST00000314567 VGFO15240 615 aaPredicted RBP34.96■■■■□ 3.19
CDPF1-201ENST00000314567 PIK3C2GO75747 1445 aa34.95■■■■□ 3.19
CDPF1-201ENST00000314567 TMEM2Q9UHN6 1383 aa34.94■■■■□ 3.18
CDPF1-201ENST00000314567 CARD11Q9BXL7 1154 aa34.93■■■■□ 3.18
CDPF1-201ENST00000314567 POLR1AO95602 1720 aaPredicted RBP34.9■■■■□ 3.18
CDPF1-201ENST00000314567 ZNF142P52746 1687 aaPredicted RBP34.89■■■■□ 3.18
CDPF1-201ENST00000314567 LTKP29376 864 aa34.88■■■■□ 3.17
CDPF1-201ENST00000314567 DDX10Q13206 875 aaKnown RBP34.88■■■■□ 3.17
CDPF1-201ENST00000314567 THEMISQ8N1K5 641 aaPredicted RBP34.86■■■■□ 3.17
CDPF1-201ENST00000314567 KIAA1210Q9ULL0 1709 aa34.85■■■■□ 3.17
CDPF1-201ENST00000314567 GPRASP1Q5JY77 1395 aa34.84■■■■□ 3.17
CDPF1-201ENST00000314567 USP47Q96K76 1375 aa34.83■■■■□ 3.17
CDPF1-201ENST00000314567 C14orf93Q9H972 538 aaKnown RBP34.83■■■■□ 3.17
CDPF1-201ENST00000314567 SLIT1O75093 1534 aa34.82■■■■□ 3.16
CDPF1-201ENST00000314567 TXNDC2Q86VQ3 553 aa34.82■■■■□ 3.16
CDPF1-201ENST00000314567 ABCF1Q8NE71 845 aaKnown RBP eCLIP34.82■■■■□ 3.16
CDPF1-201ENST00000314567 ARHGAP23Q9P227 1491 aa34.82■■■■□ 3.16
CDPF1-201ENST00000314567 TMEM132EQ6IEE7 984 aa34.81■■■■□ 3.16
CDPF1-201ENST00000314567 LAMC1P11047 1609 aa34.78■■■■□ 3.16
CDPF1-201ENST00000314567 NRXN3Q9Y4C0 1643 aa34.77■■■■□ 3.16
CDPF1-201ENST00000314567 IQGAP1P46940 1657 aa34.76■■■■□ 3.16
CDPF1-201ENST00000314567 HDGFP51858 240 aaKnown RBP34.75■■■■□ 3.15
CDPF1-201ENST00000314567 ALKQ9UM73 1620 aa34.75■■■■□ 3.15
CDPF1-201ENST00000314567 EID1Q9Y6B2 187 aa34.75■■■■□ 3.15
CDPF1-201ENST00000314567 ADGRB1O14514 1584 aa34.75■■■■□ 3.15
CDPF1-201ENST00000314567 WASHC2AQ641Q2 1341 aa34.75■■■■□ 3.15
CDPF1-201ENST00000314567 BCANQ96GW7 911 aa34.74■■■■□ 3.15
CDPF1-201ENST00000314567 ASXL1Q8IXJ9 1541 aa34.73■■■■□ 3.15
CDPF1-201ENST00000314567 SETBP1Q9Y6X0 1596 aa34.71■■■■□ 3.15
CDPF1-201ENST00000314567 ST20-MTHFSA0A0A6YYL1 179 aa34.71■■■■□ 3.15
CDPF1-201ENST00000314567 CCDC7Q96M83 1385 aa34.71■■■■□ 3.15
CDPF1-201ENST00000314567 SCAF11Q99590 1463 aaKnown RBP34.7■■■■□ 3.15
CDPF1-201ENST00000314567 SETD1AO15047 1707 aaKnown RBP34.7■■■■□ 3.14
CDPF1-201ENST00000314567 PLEKHG1Q9ULL1 1385 aa34.68■■■■□ 3.14
CDPF1-201ENST00000314567 TRAK1Q9UPV9 953 aa34.65■■■■□ 3.14
CDPF1-201ENST00000314567 ADAMTS13Q76LX8 1427 aa34.64■■■■□ 3.14
CDPF1-201ENST00000314567 SLC26A8Q96RN1 970 aa34.64■■■■□ 3.14
CDPF1-201ENST00000314567 STK26Q9P289 416 aa34.64■■■■□ 3.14
CDPF1-201ENST00000314567 HSPA2P54652 639 aa34.63■■■■□ 3.13
CDPF1-201ENST00000314567 C11orf95C9JLR9 678 aaPredicted RBP34.63■■■■□ 3.13
CDPF1-201ENST00000314567 ANKLE2Q86XL3 938 aa34.63■■■■□ 3.13
CDPF1-201ENST00000314567 METP08581 1390 aa34.62■■■■□ 3.13
CDPF1-201ENST00000314567 CENPBP07199 599 aaPredicted RBP34.61■■■■□ 3.13
CDPF1-201ENST00000314567 NCKAP5LQ9HCH0 1330 aa34.59■■■■□ 3.13
CDPF1-201ENST00000314567 ANP32CO43423 234 aa34.58■■■■□ 3.13
CDPF1-201ENST00000314567 LMTK3Q96Q04 1460 aa34.58■■■■□ 3.13
CDPF1-201ENST00000314567 KIF7Q2M1P5 1343 aa34.57■■■■□ 3.12
CDPF1-201ENST00000314567 YTHDC2Q9H6S0 1430 aaKnown RBP34.56■■■■□ 3.12
CDPF1-201ENST00000314567 MED14O60244 1454 aa34.54■■■■□ 3.12
CDPF1-201ENST00000314567 TESK2Q96S53 571 aa34.53■■■■□ 3.12
CDPF1-201ENST00000314567 ARHGEF28Q8N1W1 1705 aaKnown RBP34.52■■■■□ 3.12
CDPF1-201ENST00000314567 EIF3AQ14152 1382 aaKnown RBP34.5■■■■□ 3.11
CDPF1-201ENST00000314567 CCER2I3L3R5 266 aa34.48■■■■□ 3.11
CDPF1-201ENST00000314567 SAFB2Q14151 953 aaKnown RBP eCLIP34.48■■■■□ 3.11
CDPF1-201ENST00000314567 NPHP4O75161 1426 aaPredicted RBP34.46■■■■□ 3.11
CDPF1-201ENST00000314567 LRPPRCP42704 1394 aaKnown RBP34.46■■■■□ 3.11
CDPF1-201ENST00000314567 PTPRUQ92729 1446 aa34.45■■■■□ 3.11
CDPF1-201ENST00000314567 YTHDC1Q96MU7 727 aaKnown RBP34.45■■■■□ 3.11
CDPF1-201ENST00000314567 TBX22Q9Y458 520 aa34.45■■■■□ 3.11
CDPF1-201ENST00000314567 CENPJQ9HC77 1338 aaPredicted RBP34.44■■■■□ 3.1
CDPF1-201ENST00000314567 POLR3GLQ9BT43 218 aa34.44■■■■□ 3.1
CDPF1-201ENST00000314567 QRICH2Q9H0J4 1663 aa34.44■■■■□ 3.1
CDPF1-201ENST00000314567 DISP3Q9P2K9 1392 aa34.43■■■■□ 3.1
CDPF1-201ENST00000314567 PRAM1Q96QH2 718 aa34.42■■■■□ 3.1
CDPF1-201ENST00000314567 DIP2AQ14689 1571 aa34.42■■■■□ 3.1
CDPF1-201ENST00000314567 WAPLQ7Z5K2 1190 aa34.41■■■■□ 3.1
CDPF1-201ENST00000314567 ABCC11Q96J66 1382 aa34.39■■■■□ 3.1
CDPF1-201ENST00000314567 PLEKHH1Q9ULM0 1364 aa34.39■■■■□ 3.1
CDPF1-201ENST00000314567 POGKQ9P215 609 aa34.36■■■■□ 3.09
CDPF1-201ENST00000314567 AMOTL2Q9Y2J4 779 aa34.35■■■■□ 3.09
CDPF1-201ENST00000314567 KNDC1Q76NI1 1749 aa34.35■■■■□ 3.09
CDPF1-201ENST00000314567 STRCQ7RTU9 1775 aa34.35■■■■□ 3.09
CDPF1-201ENST00000314567 ROBO2Q9HCK4 1378 aa34.34■■■■□ 3.09
CDPF1-201ENST00000314567 DLC1Q96QB1 1528 aa34.34■■■■□ 3.09
CDPF1-201ENST00000314567 TMF1P82094 1093 aa34.33■■■■□ 3.09
CDPF1-201ENST00000314567 TECPR2O15040 1411 aa34.32■■■■□ 3.08
CDPF1-201ENST00000314567 MINK1Q8N4C8 1332 aaPredicted RBP34.31■■■■□ 3.08
CDPF1-201ENST00000314567 CPS1P31327 1500 aa34.31■■■■□ 3.08
CDPF1-201ENST00000314567 CHD2O14647 1828 aaKnown RBP34.28■■■■□ 3.08
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms