RNA–Protein interactions for RNA: ENST00000311550.9

GABRB3-202, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABRB3, Length 5,781 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-202ENST00000311550 CABP2Q9NPB3 220 aa21.41■■□□□ 1.02
GABRB3-202ENST00000311550 ZNF330Q9Y3S2 320 aaPredicted RBP21.41■■□□□ 1.02
GABRB3-202ENST00000311550 GOLGA6L6A8MZA4 724 aa21.41■■□□□ 1.02
GABRB3-202ENST00000311550 ST18O60284 1047 aa21.41■■□□□ 1.02
GABRB3-202ENST00000311550 CSB-PGBD3P0DP91 1061 aa21.41■■□□□ 1.02
GABRB3-202ENST00000311550 CHAF1AQ13111 956 aaPredicted RBP21.4■■□□□ 1.02
GABRB3-202ENST00000311550 MTHFSP49914 203 aa21.4■■□□□ 1.02
GABRB3-202ENST00000311550 ARID3AQ99856 593 aa21.4■■□□□ 1.02
GABRB3-202ENST00000311550 DDX11L8A8MPP1 907 aa21.39■■□□□ 1.02
GABRB3-202ENST00000311550 SUPT6HQ7KZ85 1726 aaKnown RBP21.39■■□□□ 1.02
GABRB3-202ENST00000311550 EID1Q9Y6B2 187 aa21.39■■□□□ 1.02
GABRB3-202ENST00000311550 TROQ12816 1431 aaPredicted RBP21.39■■□□□ 1.01
GABRB3-202ENST00000311550 RILPL2Q969X0 211 aa21.38■■□□□ 1.01
GABRB3-202ENST00000311550 TCP11L2Q8N4U5 519 aa21.38■■□□□ 1.01
GABRB3-202ENST00000311550 HMOX1P09601 288 aa21.38■■□□□ 1.01
GABRB3-202ENST00000311550 LNPKQ9C0E8 428 aa21.38■■□□□ 1.01
GABRB3-202ENST00000311550 HECW1Q76N89 1606 aa21.37■■□□□ 1.01
GABRB3-202ENST00000311550 NFKBIBQ15653 356 aa21.37■■□□□ 1.01
GABRB3-202ENST00000311550 STAC3Q96MF2 364 aa21.37■■□□□ 1.01
GABRB3-202ENST00000311550 CDK11BP21127 795 aaKnown RBP21.37■■□□□ 1.01
GABRB3-202ENST00000311550 SYAP1Q96A49 352 aaPredicted RBP21.37■■□□□ 1.01
GABRB3-202ENST00000311550 CC2D2AQ9P2K1 1620 aa21.37■■□□□ 1.01
GABRB3-202ENST00000311550 BICRAQ9NZM4 1560 aa21.36■■□□□ 1.01
GABRB3-202ENST00000311550 SMG6Q86US8 1419 aaKnown RBP21.36■■□□□ 1.01
GABRB3-202ENST00000311550 FOXD4L6Q3SYB3 417 aaPredicted RBP21.35■■□□□ 1.01
GABRB3-202ENST00000311550 FOXD4L3Q6VB84 417 aaPredicted RBP21.35■■□□□ 1.01
GABRB3-202ENST00000311550 DDX49Q9Y6V7 483 aaKnown RBP21.35■■□□□ 1.01
GABRB3-202ENST00000311550 SYNJ2O15056 1496 aa21.35■■□□□ 1.01
GABRB3-202ENST00000311550 BCAR3O75815 825 aa21.35■■□□□ 1.01
GABRB3-202ENST00000311550 EPRSP07814 1512 aaKnown RBP21.35■■□□□ 1.01
GABRB3-202ENST00000311550 CHMP3Q9Y3E7 222 aa21.35■■□□□ 1.01
GABRB3-202ENST00000311550 DNMBPQ6XZF7 1577 aa21.35■■□□□ 1.01
GABRB3-202ENST00000311550 KIAA2012Q0VF49 1180 aa21.34■■□□□ 1.01
GABRB3-202ENST00000311550 NPHP1O15259 732 aa21.34■■□□□ 1.01
GABRB3-202ENST00000311550 NRDCO43847 1150 aa21.34■■□□□ 1.01
GABRB3-202ENST00000311550 NECTIN2Q92692 538 aa21.33■■□□□ 1
GABRB3-202ENST00000311550 GPATCH3Q96I76 525 aa21.32■■□□□ 1
GABRB3-202ENST00000311550 CYB5RLQ6IPT4 315 aa21.31■■□□□ 1
GABRB3-202ENST00000311550 CHMP4AQ9BY43 222 aa21.3■■□□□ 1
GABRB3-202ENST00000311550 SLC12A5Q9H2X9 1139 aa21.3■■□□□ 1
GABRB3-202ENST00000311550 C22orf23Q9BZE7 217 aa21.3■■□□□ 1
GABRB3-202ENST00000311550 ABCA10Q8WWZ4 1543 aa21.3■■□□□ 1
GABRB3-202ENST00000311550 GNL2Q13823 731 aaKnown RBP21.29■■□□□ 1
GABRB3-202ENST00000311550 CHMP5Q9NZZ3 219 aa21.29■■□□□ 1
GABRB3-202ENST00000311550 KIF16BQ96L93 1317 aa21.29■■□□□ 1
GABRB3-202ENST00000311550 SNAPC4Q5SXM2 1469 aa21.29■■□□□ 1
GABRB3-202ENST00000311550 ANKRD30BQ9BXX2 1392 aa21.29■■□□□ 1
GABRB3-202ENST00000311550 API5Q9BZZ5 524 aaKnown RBP21.29■■□□□ 1
GABRB3-202ENST00000311550 MRC2Q9UBG0 1479 aa21.28■■□□□ 1
GABRB3-202ENST00000311550 HSP90B1P14625 803 aaKnown RBP21.28■■□□□ 1
GABRB3-202ENST00000311550 BACH2Q9BYV9 841 aa21.28■■□□□ 1
GABRB3-202ENST00000311550 TULP1O00294 542 aaPredicted RBP21.27■■□□□ 1
GABRB3-202ENST00000311550 ERBINQ96RT1 1412 aa21.27■□□□□ 0.99
GABRB3-202ENST00000311550 ROCK1Q13464 1354 aa21.25■□□□□ 0.99
GABRB3-202ENST00000311550 EIF2S2P20042 333 aaKnown RBP21.25■□□□□ 0.99
GABRB3-202ENST00000311550 PTPN23Q9H3S7 1636 aa21.25■□□□□ 0.99
GABRB3-202ENST00000311550 EXOSC9Q06265 439 aaKnown RBP21.25■□□□□ 0.99
GABRB3-202ENST00000311550 GORABQ5T7V8 394 aa21.25■□□□□ 0.99
GABRB3-202ENST00000311550 IFT140Q96RY7 1462 aa21.25■□□□□ 0.99
GABRB3-202ENST00000311550 TSR2Q969E8 191 aaKnown RBP21.25■□□□□ 0.99
GABRB3-202ENST00000311550 PDZRN3Q9UPQ7 1066 aa21.24■□□□□ 0.99
GABRB3-202ENST00000311550 MAP3K1Q13233 1512 aa21.24■□□□□ 0.99
GABRB3-202ENST00000311550 GNAI1P63096 354 aa21.24■□□□□ 0.99
GABRB3-202ENST00000311550 HDAC5Q9UQL6 1122 aa21.24■□□□□ 0.99
GABRB3-202ENST00000311550 CCDC9Q9Y3X0 531 aaKnown RBP21.23■□□□□ 0.99
GABRB3-202ENST00000311550 SKOR2Q2VWA4 1001 aaPredicted RBP21.22■□□□□ 0.99
GABRB3-202ENST00000311550 ABCC5O15440 1437 aa21.22■□□□□ 0.99
GABRB3-202ENST00000311550 OSCARQ8IYS5 282 aa21.22■□□□□ 0.99
GABRB3-202ENST00000311550 MSH5O43196 834 aa21.21■□□□□ 0.99
GABRB3-202ENST00000311550 FRAT2O75474 233 aaPredicted RBP21.21■□□□□ 0.99
GABRB3-202ENST00000311550 REC8O95072 547 aa21.21■□□□□ 0.99
GABRB3-202ENST00000311550 SKAP1Q86WV1 359 aa21.21■□□□□ 0.99
GABRB3-202ENST00000311550 HTATSF1O43719 755 aaKnown RBP21.21■□□□□ 0.99
GABRB3-202ENST00000311550 FKBP5Q13451 457 aaPredicted RBP21.2■□□□□ 0.98
GABRB3-202ENST00000311550 PDE3AQ14432 1141 aa21.2■□□□□ 0.98
GABRB3-202ENST00000311550 AAMPQ13685 434 aa21.19■□□□□ 0.98
GABRB3-202ENST00000311550 TEFQ10587 303 aa21.19■□□□□ 0.98
GABRB3-202ENST00000311550 PRKAR2BP31323 418 aa21.18■□□□□ 0.98
GABRB3-202ENST00000311550 TAF7LQ5H9L4 462 aa21.18■□□□□ 0.98
GABRB3-202ENST00000311550 ANO2Q9NQ90 1003 aa21.17■□□□□ 0.98
GABRB3-202ENST00000311550 DNAJC5BQ9UF47 199 aa21.17■□□□□ 0.98
GABRB3-202ENST00000311550 SCAPERQ9BY12 1400 aa21.17■□□□□ 0.98
GABRB3-202ENST00000311550 IQGAP2Q13576 1575 aa21.17■□□□□ 0.98
GABRB3-202ENST00000311550 C1orf115Q9H7X2 142 aa21.17■□□□□ 0.98
GABRB3-202ENST00000311550 CSPP1Q1MSJ5 1256 aa21.17■□□□□ 0.98
GABRB3-202ENST00000311550 TSPYL4Q9UJ04 414 aa21.17■□□□□ 0.98
GABRB3-202ENST00000311550 PHF14O94880 888 aa21.16■□□□□ 0.98
GABRB3-202ENST00000311550 ARHGEF11O15085 1522 aa21.16■□□□□ 0.98
GABRB3-202ENST00000311550 KIAA0586Q9BVV6 1533 aa21.16■□□□□ 0.98
GABRB3-202ENST00000311550 PRAM1Q96QH2 718 aa21.16■□□□□ 0.98
GABRB3-202ENST00000311550 CAMSAP2Q08AD1 1489 aa21.15■□□□□ 0.98
GABRB3-202ENST00000311550 MAPKBP1O60336 1514 aa21.15■□□□□ 0.98
GABRB3-202ENST00000311550 NCOA1Q15788 1441 aa21.15■□□□□ 0.98
GABRB3-202ENST00000311550 DIAPH3Q9NSV4 1193 aa21.15■□□□□ 0.98
GABRB3-202ENST00000311550 NOB1Q9ULX3 412 aaKnown RBP21.14■□□□□ 0.98
GABRB3-202ENST00000311550 C1orf141Q5JVX7 400 aa21.14■□□□□ 0.98
GABRB3-202ENST00000311550 C20orf194Q5TEA3 1177 aa21.14■□□□□ 0.97
GABRB3-202ENST00000311550 INTS3Q68E01 1043 aaKnown RBP21.14■□□□□ 0.97
GABRB3-202ENST00000311550 RSPH6AQ9H0K4 717 aa21.14■□□□□ 0.97
GABRB3-202ENST00000311550 PLB1Q6P1J6 1458 aa21.13■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms