RNA–Protein interactions for RNA: ENST00000309877.11

IRF3-201, Transcript of interferon regulatory factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IRF3, Length 1,691 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-201ENST00000309877 PPLO60437 1756 aa31.64■■■□□ 2.65
IRF3-201ENST00000309877 VGFO15240 615 aaPredicted RBP31.64■■■□□ 2.65
IRF3-201ENST00000309877 CEBPAP49715 358 aaPredicted RBP31.64■■■□□ 2.65
IRF3-201ENST00000309877 NRXN1Q9ULB1 1477 aa31.62■■■□□ 2.65
IRF3-201ENST00000309877 NEXMIFQ5QGS0 1516 aa31.6■■■□□ 2.65
IRF3-201ENST00000309877 PLPPR3Q6T4P5 718 aa31.59■■■□□ 2.65
IRF3-201ENST00000309877 LAMC1P11047 1609 aa31.59■■■□□ 2.65
IRF3-201ENST00000309877 C3P01024 1663 aa31.58■■■□□ 2.65
IRF3-201ENST00000309877 NUTM2DQ5VT03 806 aaPredicted RBP31.57■■■□□ 2.65
IRF3-201ENST00000309877 CFAP70Q5T0N1 1121 aa31.57■■■□□ 2.64
IRF3-201ENST00000309877 A2ML1A8K2U0 1454 aa31.56■■■□□ 2.64
IRF3-201ENST00000309877 MYO5BQ9ULV0 1848 aa31.56■■■□□ 2.64
IRF3-201ENST00000309877 KIAA1210Q9ULL0 1709 aa31.56■■■□□ 2.64
IRF3-201ENST00000309877 PIK3C2GO75747 1445 aa31.54■■■□□ 2.64
IRF3-201ENST00000309877 ZFYVE9O95405 1425 aa31.54■■■□□ 2.64
IRF3-201ENST00000309877 ST20-MTHFSA0A0A6YYL1 179 aa31.54■■■□□ 2.64
IRF3-201ENST00000309877 DDX10Q13206 875 aaKnown RBP31.52■■■□□ 2.64
IRF3-201ENST00000309877 C14orf93Q9H972 538 aaKnown RBP31.51■■■□□ 2.63
IRF3-201ENST00000309877 NLRP1Q9C000 1473 aa31.5■■■□□ 2.63
IRF3-201ENST00000309877 ADAMTSL3P82987 1691 aa31.49■■■□□ 2.63
IRF3-201ENST00000309877 RIMS1Q86UR5 1692 aaKnown RBP31.49■■■□□ 2.63
IRF3-201ENST00000309877 WASHC2AQ641Q2 1341 aa31.49■■■□□ 2.63
IRF3-201ENST00000309877 C11orf95C9JLR9 678 aaPredicted RBP31.47■■■□□ 2.63
IRF3-201ENST00000309877 RIMS2Q9UQ26 1411 aa31.47■■■□□ 2.63
IRF3-201ENST00000309877 SCAF11Q99590 1463 aaKnown RBP31.46■■■□□ 2.63
IRF3-201ENST00000309877 CCDC7Q96M83 1385 aa31.44■■■□□ 2.62
IRF3-201ENST00000309877 HDGFP51858 240 aaKnown RBP31.44■■■□□ 2.62
IRF3-201ENST00000309877 ABCF1Q8NE71 845 aaKnown RBP eCLIP31.44■■■□□ 2.62
IRF3-201ENST00000309877 KDM5AP29375 1690 aaKnown RBP31.43■■■□□ 2.62
IRF3-201ENST00000309877 SETBP1Q9Y6X0 1596 aa31.41■■■□□ 2.62
IRF3-201ENST00000309877 KIF7Q2M1P5 1343 aa31.41■■■□□ 2.62
IRF3-201ENST00000309877 EIF3AQ14152 1382 aaKnown RBP31.4■■■□□ 2.62
IRF3-201ENST00000309877 IQGAP1P46940 1657 aa31.4■■■□□ 2.62
IRF3-201ENST00000309877 UBR1Q8IWV7 1749 aa31.39■■■□□ 2.62
IRF3-201ENST00000309877 SENP3Q9H4L4 574 aaPredicted RBP31.37■■■□□ 2.61
IRF3-201ENST00000309877 TMEM2Q9UHN6 1383 aa31.37■■■□□ 2.61
IRF3-201ENST00000309877 TMEM132EQ6IEE7 984 aa31.35■■■□□ 2.61
IRF3-201ENST00000309877 POLR3GLQ9BT43 218 aa31.34■■■□□ 2.61
IRF3-201ENST00000309877 POLR1AO95602 1720 aaPredicted RBP31.34■■■□□ 2.61
IRF3-201ENST00000309877 ADGRB1O14514 1584 aa31.33■■■□□ 2.61
IRF3-201ENST00000309877 TESK2Q96S53 571 aa31.33■■■□□ 2.61
IRF3-201ENST00000309877 MIER1Q8N108 512 aa31.32■■■□□ 2.6
IRF3-201ENST00000309877 THEMISQ8N1K5 641 aaPredicted RBP31.31■■■□□ 2.6
IRF3-201ENST00000309877 MYO3AQ8NEV4 1616 aa31.31■■■□□ 2.6
IRF3-201ENST00000309877 TMF1P82094 1093 aa31.29■■■□□ 2.6
IRF3-201ENST00000309877 TRAK1Q9UPV9 953 aa31.29■■■□□ 2.6
IRF3-201ENST00000309877 ALKQ9UM73 1620 aa31.27■■■□□ 2.6
IRF3-201ENST00000309877 EID1Q9Y6B2 187 aa31.26■■■□□ 2.6
IRF3-201ENST00000309877 BCANQ96GW7 911 aa31.25■■■□□ 2.59
IRF3-201ENST00000309877 PTPRMP28827 1452 aa31.24■■■□□ 2.59
IRF3-201ENST00000309877 SLC24A1O60721 1099 aa31.24■■■□□ 2.59
IRF3-201ENST00000309877 TXNDC2Q86VQ3 553 aa31.24■■■□□ 2.59
IRF3-201ENST00000309877 CEP170BQ9Y4F5 1589 aaPredicted RBP31.22■■■□□ 2.59
IRF3-201ENST00000309877 DISP3Q9P2K9 1392 aa31.22■■■□□ 2.59
IRF3-201ENST00000309877 CENPJQ9HC77 1338 aaPredicted RBP31.22■■■□□ 2.59
IRF3-201ENST00000309877 SLIT1O75093 1534 aa31.22■■■□□ 2.59
IRF3-201ENST00000309877 LTKP29376 864 aa31.21■■■□□ 2.59
IRF3-201ENST00000309877 ASXL1Q8IXJ9 1541 aa31.2■■■□□ 2.59
IRF3-201ENST00000309877 ARHGAP23Q9P227 1491 aa31.2■■■□□ 2.59
IRF3-201ENST00000309877 STK26Q9P289 416 aa31.2■■■□□ 2.59
IRF3-201ENST00000309877 CDCA8Q53HL2 280 aa31.18■■■□□ 2.58
IRF3-201ENST00000309877 PLEKHG1Q9ULL1 1385 aa31.18■■■□□ 2.58
IRF3-201ENST00000309877 YTHDC2Q9H6S0 1430 aaKnown RBP31.17■■■□□ 2.58
IRF3-201ENST00000309877 ANP32CO43423 234 aa31.16■■■□□ 2.58
IRF3-201ENST00000309877 NRXN3Q9Y4C0 1643 aa31.15■■■□□ 2.58
IRF3-201ENST00000309877 SETD1BQ9UPS6 1966 aaKnown RBP31.15■■■□□ 2.58
IRF3-201ENST00000309877 SBNO2Q9Y2G9 1366 aa31.13■■■□□ 2.57
IRF3-201ENST00000309877 ZNF142P52746 1687 aaPredicted RBP31.12■■■□□ 2.57
IRF3-201ENST00000309877 SETD1AO15047 1707 aaKnown RBP31.1■■■□□ 2.57
IRF3-201ENST00000309877 ARHGEF28Q8N1W1 1705 aaKnown RBP31.1■■■□□ 2.57
IRF3-201ENST00000309877 LRPPRCP42704 1394 aaKnown RBP31.09■■■□□ 2.57
IRF3-201ENST00000309877 METP08581 1390 aa31.08■■■□□ 2.57
IRF3-201ENST00000309877 POGKQ9P215 609 aa31.07■■■□□ 2.56
IRF3-201ENST00000309877 ADAMTS13Q76LX8 1427 aa31.07■■■□□ 2.56
IRF3-201ENST00000309877 QRICH2Q9H0J4 1663 aa31.06■■■□□ 2.56
IRF3-201ENST00000309877 ANKLE2Q86XL3 938 aa31.05■■■□□ 2.56
IRF3-201ENST00000309877 PRAM1Q96QH2 718 aa31.05■■■□□ 2.56
IRF3-201ENST00000309877 ABCC11Q96J66 1382 aa31.04■■■□□ 2.56
IRF3-201ENST00000309877 SAFB2Q14151 953 aaKnown RBP eCLIP31.03■■■□□ 2.56
IRF3-201ENST00000309877 SLC26A8Q96RN1 970 aa31.02■■■□□ 2.56
IRF3-201ENST00000309877 DLC1Q96QB1 1528 aa31.01■■■□□ 2.56
IRF3-201ENST00000309877 TBX22Q9Y458 520 aa31■■■□□ 2.55
IRF3-201ENST00000309877 MED14O60244 1454 aa31■■■□□ 2.55
IRF3-201ENST00000309877 EVC2Q86UK5 1308 aa30.98■■■□□ 2.55
IRF3-201ENST00000309877 KDM4FA0A1W2PPD8 638 aa30.98■■■□□ 2.55
IRF3-201ENST00000309877 SIRT1Q96EB6 747 aa30.95■■■□□ 2.55
IRF3-201ENST00000309877 DIP2AQ14689 1571 aa30.95■■■□□ 2.54
IRF3-201ENST00000309877 PANK3Q9H999 370 aa30.94■■■□□ 2.54
IRF3-201ENST00000309877 MINK1Q8N4C8 1332 aaPredicted RBP30.94■■■□□ 2.54
IRF3-201ENST00000309877 WAPLQ7Z5K2 1190 aa30.93■■■□□ 2.54
IRF3-201ENST00000309877 TECPR2O15040 1411 aa30.93■■■□□ 2.54
IRF3-201ENST00000309877 PUS7Q96PZ0 661 aaKnown RBP30.91■■■□□ 2.54
IRF3-201ENST00000309877 FAM135BQ49AJ0 1406 aa30.9■■■□□ 2.54
IRF3-201ENST00000309877 KNDC1Q76NI1 1749 aa30.9■■■□□ 2.54
IRF3-201ENST00000309877 PRKRIP1Q9H875 184 aaPredicted RBP30.9■■■□□ 2.54
IRF3-201ENST00000309877 TULP4Q9NRJ4 1543 aa30.89■■■□□ 2.54
IRF3-201ENST00000309877 PLEKHH1Q9ULM0 1364 aa30.89■■■□□ 2.54
IRF3-201ENST00000309877 CCER2I3L3R5 266 aa30.88■■■□□ 2.53
IRF3-201ENST00000309877 CPS1P31327 1500 aa30.88■■■□□ 2.53
IRF3-201ENST00000309877 PTPRUQ92729 1446 aa30.86■■■□□ 2.53
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms