RNA–Protein interactions for RNA: ENST00000308639.13

RELA-201, Transcript of RELA proto-oncogene, NF-kB subunit, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RELA, Length 2,681 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RELA-201ENST00000308639 CFAP70Q5T0N1 1121 aa27.54■■■□□ 2
RELA-201ENST00000308639 CCDC146Q8IYE0 955 aa27.54■■■□□ 2
RELA-201ENST00000308639 CEP152O94986 1710 aa27.54■■■□□ 2
RELA-201ENST00000308639 PTPRTO14522 1441 aa27.54■■■□□ 2
RELA-201ENST00000308639 SCAPERQ9BY12 1400 aa27.52■■■□□ 2
RELA-201ENST00000308639 PDE4AP27815 886 aa27.52■■■□□ 2
RELA-201ENST00000308639 ZBTB47Q9UFB7 747 aaPredicted RBP27.51■■□□□ 1.99
RELA-201ENST00000308639 RTEL1-TNFRSF6BF6WH68 1400 aa27.5■■□□□ 1.99
RELA-201ENST00000308639 TCERG1O14776 1098 aaKnown RBP27.5■■□□□ 1.99
RELA-201ENST00000308639 ADGRF5Q8IZF2 1346 aa27.49■■□□□ 1.99
RELA-201ENST00000308639 FANCAO15360 1455 aa27.49■■□□□ 1.99
RELA-201ENST00000308639 DUSP27Q5VZP5 1158 aa27.48■■□□□ 1.99
RELA-201ENST00000308639 INSRP06213 1382 aa27.48■■□□□ 1.99
RELA-201ENST00000308639 ATP7AQ04656 1500 aa27.48■■□□□ 1.99
RELA-201ENST00000308639 MYOM1P52179 1685 aa27.46■■□□□ 1.99
RELA-201ENST00000308639 DEPDC5O75140 1603 aa27.46■■□□□ 1.99
RELA-201ENST00000308639 TET3O43151 1660 aa27.46■■□□□ 1.99
RELA-201ENST00000308639 SYNMO15061 1565 aa27.46■■□□□ 1.99
RELA-201ENST00000308639 ASXL1Q8IXJ9 1541 aa27.45■■□□□ 1.99
RELA-201ENST00000308639 DEKP35659 375 aaKnown RBP27.45■■□□□ 1.98
RELA-201ENST00000308639 CDCA8Q53HL2 280 aa27.45■■□□□ 1.98
RELA-201ENST00000308639 KANK1Q14678 1352 aa27.45■■□□□ 1.98
RELA-201ENST00000308639 BACH2Q9BYV9 841 aa27.44■■□□□ 1.98
RELA-201ENST00000308639 SPINK5Q9NQ38 1064 aaPredicted RBP27.43■■□□□ 1.98
RELA-201ENST00000308639 ADGRL1O94910 1474 aa27.41■■□□□ 1.98
RELA-201ENST00000308639 INO80Q9ULG1 1556 aaPredicted RBP27.41■■□□□ 1.98
RELA-201ENST00000308639 ZNF521Q96K83 1311 aa27.41■■□□□ 1.98
RELA-201ENST00000308639 GOLGA2Q08379 1002 aa27.4■■□□□ 1.98
RELA-201ENST00000308639 CARD14Q9BXL6 1004 aa27.4■■□□□ 1.98
RELA-201ENST00000308639 APAF1O14727 1248 aa27.39■■□□□ 1.98
RELA-201ENST00000308639 CHGAP10645 457 aaKnown RBP27.39■■□□□ 1.98
RELA-201ENST00000308639 EIF3AQ14152 1382 aaKnown RBP27.38■■□□□ 1.97
RELA-201ENST00000308639 VWDEQ8N2E2 1590 aa27.38■■□□□ 1.97
RELA-201ENST00000308639 ARAP3Q8WWN8 1544 aa27.37■■□□□ 1.97
RELA-201ENST00000308639 ABCA9Q8IUA7 1624 aa27.37■■□□□ 1.97
RELA-201ENST00000308639 ABCA6Q8N139 1617 aa27.37■■□□□ 1.97
RELA-201ENST00000308639 MROH1Q8NDA8 1641 aa27.37■■□□□ 1.97
RELA-201ENST00000308639 ERVK-7P63135 1459 aa27.37■■□□□ 1.97
RELA-201ENST00000308639 DMRT2Q9Y5R5 561 aa27.35■■□□□ 1.97
RELA-201ENST00000308639 KDM5AP29375 1690 aaKnown RBP27.35■■□□□ 1.97
RELA-201ENST00000308639 PIK3C2GO75747 1445 aa27.35■■□□□ 1.97
RELA-201ENST00000308639 MS4A1P11836 297 aa27.34■■□□□ 1.97
RELA-201ENST00000308639 SLFN5Q08AF3 891 aa27.34■■□□□ 1.97
RELA-201ENST00000308639 STAC3Q96MF2 364 aa27.34■■□□□ 1.97
RELA-201ENST00000308639 CFAP65Q6ZU64 1925 aaKnown RBP27.33■■□□□ 1.97
RELA-201ENST00000308639 MAP3K4Q9Y6R4 1608 aa27.33■■□□□ 1.97
RELA-201ENST00000308639 LAS1LQ9Y4W2 734 aaKnown RBP27.33■■□□□ 1.96
RELA-201ENST00000308639 MROH2AA6NES4 1674 aa27.32■■□□□ 1.96
RELA-201ENST00000308639 TNNT2P45379 298 aaPredicted RBP27.31■■□□□ 1.96
RELA-201ENST00000308639 KDM2BQ8NHM5 1336 aa27.3■■□□□ 1.96
RELA-201ENST00000308639 TRAK1Q9UPV9 953 aa27.3■■□□□ 1.96
RELA-201ENST00000308639 BCAR3O75815 825 aa27.29■■□□□ 1.96
RELA-201ENST00000308639 ASXL2Q76L83 1435 aa27.28■■□□□ 1.96
RELA-201ENST00000308639 PPRC1Q5VV67 1664 aaKnown RBP27.27■■□□□ 1.96
RELA-201ENST00000308639 NOS1P29475 1434 aa27.27■■□□□ 1.96
RELA-201ENST00000308639 KIAA1210Q9ULL0 1709 aa27.27■■□□□ 1.96
RELA-201ENST00000308639 KIF1BO60333 1816 aa27.27■■□□□ 1.96
RELA-201ENST00000308639 NPC1L1Q9UHC9 1359 aa27.27■■□□□ 1.96
RELA-201ENST00000308639 TMEM132EQ6IEE7 984 aa27.26■■□□□ 1.95
RELA-201ENST00000308639 SENP3Q9H4L4 574 aaPredicted RBP27.25■■□□□ 1.95
RELA-201ENST00000308639 EFCAB6Q5THR3 1501 aa27.25■■□□□ 1.95
RELA-201ENST00000308639 MYOM2P54296 1465 aa27.25■■□□□ 1.95
RELA-201ENST00000308639 GGT6Q6P531 493 aa27.25■■□□□ 1.95
RELA-201ENST00000308639 KIDINS220Q9ULH0 1771 aa27.25■■□□□ 1.95
RELA-201ENST00000308639 NUTM2DQ5VT03 806 aaPredicted RBP27.24■■□□□ 1.95
RELA-201ENST00000308639 TRMT2AQ8IZ69 625 aaKnown RBP27.23■■□□□ 1.95
RELA-201ENST00000308639 SLC12A5Q9H2X9 1139 aa27.22■■□□□ 1.95
RELA-201ENST00000308639 NEUROD2Q15784 382 aa27.21■■□□□ 1.95
RELA-201ENST00000308639 RTL5Q5HYW3 569 aaPredicted RBP27.21■■□□□ 1.95
RELA-201ENST00000308639 CENPJQ9HC77 1338 aaPredicted RBP27.2■■□□□ 1.95
RELA-201ENST00000308639 IFT172Q9UG01 1749 aa27.2■■□□□ 1.94
RELA-201ENST00000308639 RGS3P49796 1198 aa27.2■■□□□ 1.94
RELA-201ENST00000308639 CENPQQ7L2Z9 268 aaPredicted RBP27.2■■□□□ 1.94
RELA-201ENST00000308639 RRP7AQ9Y3A4 280 aaKnown RBP27.19■■□□□ 1.94
RELA-201ENST00000308639 SLC4A3P48751 1232 aa27.18■■□□□ 1.94
RELA-201ENST00000308639 GOLGA6L2Q8N9W4 650 aaPredicted RBP27.18■■□□□ 1.94
RELA-201ENST00000308639 NKTRP30414 1462 aaKnown RBP27.17■■□□□ 1.94
RELA-201ENST00000308639 NSD3Q9BZ95 1437 aa27.17■■□□□ 1.94
RELA-201ENST00000308639 ANO8Q9HCE9 1232 aaPredicted RBP27.15■■□□□ 1.94
RELA-201ENST00000308639 NEURL4Q96JN8 1562 aa27.14■■□□□ 1.94
RELA-201ENST00000308639 NPATQ14207 1427 aa27.14■■□□□ 1.94
RELA-201ENST00000308639 MORC1Q86VD1 984 aa27.14■■□□□ 1.94
RELA-201ENST00000308639 E9PSI1 815 aa27.13■■□□□ 1.93
RELA-201ENST00000308639 NRXN1Q9ULB1 1477 aa27.13■■□□□ 1.93
RELA-201ENST00000308639 OSCARQ8IYS5 282 aa27.13■■□□□ 1.93
RELA-201ENST00000308639 ADGRB3O60242 1522 aa27.12■■□□□ 1.93
RELA-201ENST00000308639 WWC1Q8IX03 1113 aa27.12■■□□□ 1.93
RELA-201ENST00000308639 NEFMP07197 916 aa27.11■■□□□ 1.93
RELA-201ENST00000308639 C8orf34Q49A92 452 aa27.11■■□□□ 1.93
RELA-201ENST00000308639 ZNF518AQ6AHZ1 1483 aa27.1■■□□□ 1.93
RELA-201ENST00000308639 PANK1Q8TE04 598 aa27.09■■□□□ 1.93
RELA-201ENST00000308639 C14orf93Q9H972 538 aaKnown RBP27.09■■□□□ 1.93
RELA-201ENST00000308639 IGHDP01880 384 aa27.08■■□□□ 1.93
RELA-201ENST00000308639 MYO3AQ8NEV4 1616 aa27.08■■□□□ 1.93
RELA-201ENST00000308639 SAFB2Q14151 953 aaKnown RBP eCLIP27.07■■□□□ 1.92
RELA-201ENST00000308639 POLR3AO14802 1390 aaPredicted RBP27.07■■□□□ 1.92
RELA-201ENST00000308639 SLC24A1O60721 1099 aa27.06■■□□□ 1.92
RELA-201ENST00000308639 FRMPD1Q5SYB0 1578 aa27.06■■□□□ 1.92
RELA-201ENST00000308639 COG6Q9Y2V7 657 aa27.06■■□□□ 1.92
RELA-201ENST00000308639 SBNO2Q9Y2G9 1366 aa27.06■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms