RNA–Protein interactions for RNA: ENST00000308127.8

SSH3-201, Transcript of slingshot protein phosphatase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSH3, Length 2,871 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-201ENST00000308127 SLFN5Q08AF3 891 aa21.62■■□□□ 1.05
SSH3-201ENST00000308127 RRP7AQ9Y3A4 280 aaKnown RBP21.62■■□□□ 1.05
SSH3-201ENST00000308127 CFAP70Q5T0N1 1121 aa21.62■■□□□ 1.05
SSH3-201ENST00000308127 DDRGK1Q96HY6 314 aa21.62■■□□□ 1.05
SSH3-201ENST00000308127 ERCC6L2Q5T890 1561 aa21.61■■□□□ 1.05
SSH3-201ENST00000308127 FAM161AQ3B820 660 aa21.6■■□□□ 1.05
SSH3-201ENST00000308127 ZNF521Q96K83 1311 aa21.6■■□□□ 1.05
SSH3-201ENST00000308127 TRAPPC8Q9Y2L5 1435 aa21.6■■□□□ 1.05
SSH3-201ENST00000308127 UNC13BO14795 1591 aa21.6■■□□□ 1.05
SSH3-201ENST00000308127 IGHDP01880 384 aa21.59■■□□□ 1.05
SSH3-201ENST00000308127 PANK1Q8TE04 598 aa21.58■■□□□ 1.05
SSH3-201ENST00000308127 FRAT1Q92837 279 aaPredicted RBP21.58■■□□□ 1.05
SSH3-201ENST00000308127 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.57■■□□□ 1.04
SSH3-201ENST00000308127 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.57■■□□□ 1.04
SSH3-201ENST00000308127 COG6Q9Y2V7 657 aa21.57■■□□□ 1.04
SSH3-201ENST00000308127 FRAT2O75474 233 aaPredicted RBP21.56■■□□□ 1.04
SSH3-201ENST00000308127 CANXP27824 592 aaKnown RBP21.56■■□□□ 1.04
SSH3-201ENST00000308127 EFCAB2Q5VUJ9 269 aa21.56■■□□□ 1.04
SSH3-201ENST00000308127 BCL2L13Q9BXK5 485 aa21.56■■□□□ 1.04
SSH3-201ENST00000308127 IQGAP3Q86VI3 1631 aa21.56■■□□□ 1.04
SSH3-201ENST00000308127 CARD14Q9BXL6 1004 aa21.55■■□□□ 1.04
SSH3-201ENST00000308127 USP35Q9P2H5 1018 aa21.55■■□□□ 1.04
SSH3-201ENST00000308127 SPAG9O60271 1321 aaKnown RBP21.55■■□□□ 1.04
SSH3-201ENST00000308127 CHGAP10645 457 aaKnown RBP21.55■■□□□ 1.04
SSH3-201ENST00000308127 TNNQ9UQP3 1299 aa21.54■■□□□ 1.04
SSH3-201ENST00000308127 EIF2AK4Q9P2K8 1649 aaKnown RBP21.54■■□□□ 1.04
SSH3-201ENST00000308127 SEC24BO95487 1268 aa21.53■■□□□ 1.04
SSH3-201ENST00000308127 KIF3BO15066 747 aa21.53■■□□□ 1.04
SSH3-201ENST00000308127 GSE1Q14687 1217 aa21.52■■□□□ 1.04
SSH3-201ENST00000308127 MAST1Q9Y2H9 1570 aa21.52■■□□□ 1.04
SSH3-201ENST00000308127 ADGRF5Q8IZF2 1346 aa21.52■■□□□ 1.03
SSH3-201ENST00000308127 DUOX2Q9NRD8 1548 aa21.52■■□□□ 1.03
SSH3-201ENST00000308127 CDCA8Q53HL2 280 aa21.5■■□□□ 1.03
SSH3-201ENST00000308127 ASXL1Q8IXJ9 1541 aa21.49■■□□□ 1.03
SSH3-201ENST00000308127 LAMC1P11047 1609 aa21.49■■□□□ 1.03
SSH3-201ENST00000308127 CLUAP1Q96AJ1 413 aa21.49■■□□□ 1.03
SSH3-201ENST00000308127 SCAF11Q99590 1463 aaKnown RBP21.49■■□□□ 1.03
SSH3-201ENST00000308127 MADDQ8WXG6 1647 aa21.48■■□□□ 1.03
SSH3-201ENST00000308127 UGGT1Q9NYU2 1555 aa21.48■■□□□ 1.03
SSH3-201ENST00000308127 ATP10AO60312 1499 aa21.48■■□□□ 1.03
SSH3-201ENST00000308127 SLKQ9H2G2 1235 aaPredicted RBP21.46■■□□□ 1.03
SSH3-201ENST00000308127 INSRP06213 1382 aa21.46■■□□□ 1.03
SSH3-201ENST00000308127 TRAK1Q9UPV9 953 aa21.46■■□□□ 1.03
SSH3-201ENST00000308127 RNF17Q9BXT8 1623 aaKnown RBP21.46■■□□□ 1.03
SSH3-201ENST00000308127 NUTM2DQ5VT03 806 aaPredicted RBP21.46■■□□□ 1.03
SSH3-201ENST00000308127 TRMT2AQ8IZ69 625 aaKnown RBP21.46■■□□□ 1.03
SSH3-201ENST00000308127 NKTRP30414 1462 aaKnown RBP21.45■■□□□ 1.02
SSH3-201ENST00000308127 PLXNC1O60486 1568 aa21.45■■□□□ 1.02
SSH3-201ENST00000308127 E9PSI1 815 aa21.44■■□□□ 1.02
SSH3-201ENST00000308127 CENPJQ9HC77 1338 aaPredicted RBP21.44■■□□□ 1.02
SSH3-201ENST00000308127 PLCH2O75038 1416 aa21.43■■□□□ 1.02
SSH3-201ENST00000308127 ARXQ96QS3 562 aa21.43■■□□□ 1.02
SSH3-201ENST00000308127 SLC12A5Q9H2X9 1139 aa21.43■■□□□ 1.02
SSH3-201ENST00000308127 WWC1Q8IX03 1113 aa21.43■■□□□ 1.02
SSH3-201ENST00000308127 TMEM132EQ6IEE7 984 aa21.42■■□□□ 1.02
SSH3-201ENST00000308127 PIK3C2GO75747 1445 aa21.42■■□□□ 1.02
SSH3-201ENST00000308127 SPRYD3Q8NCJ5 442 aa21.42■■□□□ 1.02
SSH3-201ENST00000308127 CLTCL1P53675 1640 aa21.41■■□□□ 1.02
SSH3-201ENST00000308127 IQGAP1P46940 1657 aa21.41■■□□□ 1.02
SSH3-201ENST00000308127 CHD1O14646 1710 aa21.41■■□□□ 1.02
SSH3-201ENST00000308127 RLBP1P12271 317 aa21.41■■□□□ 1.02
SSH3-201ENST00000308127 MORC1Q86VD1 984 aa21.4■■□□□ 1.02
SSH3-201ENST00000308127 USP19O94966 1318 aa21.39■■□□□ 1.02
SSH3-201ENST00000308127 SYNMO15061 1565 aa21.39■■□□□ 1.01
SSH3-201ENST00000308127 ABCC2Q92887 1545 aa21.39■■□□□ 1.01
SSH3-201ENST00000308127 SAFB2Q14151 953 aaKnown RBP eCLIP21.38■■□□□ 1.01
SSH3-201ENST00000308127 EIF3AQ14152 1382 aaKnown RBP21.38■■□□□ 1.01
SSH3-201ENST00000308127 MYOM1P52179 1685 aa21.38■■□□□ 1.01
SSH3-201ENST00000308127 ERVK-7P63135 1459 aa21.37■■□□□ 1.01
SSH3-201ENST00000308127 TCP11L2Q8N4U5 519 aa21.37■■□□□ 1.01
SSH3-201ENST00000308127 PCDHB15Q9Y5E8 787 aa21.37■■□□□ 1.01
SSH3-201ENST00000308127 SCAPERQ9BY12 1400 aa21.36■■□□□ 1.01
SSH3-201ENST00000308127 POGKQ9P215 609 aa21.34■■□□□ 1.01
SSH3-201ENST00000308127 ABCC1P33527 1531 aa21.34■■□□□ 1.01
SSH3-201ENST00000308127 TRPM2O94759 1503 aa21.33■■□□□ 1.01
SSH3-201ENST00000308127 NSD3Q9BZ95 1437 aa21.33■■□□□ 1.01
SSH3-201ENST00000308127 MTHFSP49914 203 aa21.32■■□□□ 1
SSH3-201ENST00000308127 CGNL1Q0VF96 1302 aa21.32■■□□□ 1
SSH3-201ENST00000308127 SPHKAPQ2M3C7 1700 aa21.32■■□□□ 1
SSH3-201ENST00000308127 RARSP54136 660 aaKnown RBP21.31■■□□□ 1
SSH3-201ENST00000308127 KANK1Q14678 1352 aa21.31■■□□□ 1
SSH3-201ENST00000308127 CFAP65Q6ZU64 1925 aaKnown RBP21.3■■□□□ 1
SSH3-201ENST00000308127 PTPRTO14522 1441 aa21.3■■□□□ 1
SSH3-201ENST00000308127 TSR2Q969E8 191 aaKnown RBP21.3■■□□□ 1
SSH3-201ENST00000308127 KDM5AP29375 1690 aaKnown RBP21.29■■□□□ 1
SSH3-201ENST00000308127 PDE3AQ14432 1141 aa21.29■■□□□ 1
SSH3-201ENST00000308127 PDZRN3Q9UPQ7 1066 aa21.29■■□□□ 1
SSH3-201ENST00000308127 ZCCHC11Q5TAX3 1644 aaKnown RBP21.28■■□□□ 1
SSH3-201ENST00000308127 GGT6Q6P531 493 aa21.28■■□□□ 1
SSH3-201ENST00000308127 ZFYVE16Q7Z3T8 1539 aa21.27■■□□□ 1
SSH3-201ENST00000308127 U2AF1L5P0DN76 240 aaPredicted RBP21.27■■□□□ 1
SSH3-201ENST00000308127 U2AF1Q01081 240 aaKnown RBP eCLIP21.27■■□□□ 1
SSH3-201ENST00000308127 NPC1L1Q9UHC9 1359 aa21.27■■□□□ 1
SSH3-201ENST00000308127 NOS1P29475 1434 aa21.26■□□□□ 0.99
SSH3-201ENST00000308127 CLASP1Q7Z460 1538 aa21.26■□□□□ 0.99
SSH3-201ENST00000308127 CEP152O94986 1710 aa21.26■□□□□ 0.99
SSH3-201ENST00000308127 RUNDC1Q96C34 613 aa21.26■□□□□ 0.99
SSH3-201ENST00000308127 ABCA6Q8N139 1617 aa21.24■□□□□ 0.99
SSH3-201ENST00000308127 U2SURPO15042 1029 aaKnown RBP21.22■□□□□ 0.99
SSH3-201ENST00000308127 EIF5BO60841 1220 aaKnown RBP21.22■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms