RNA–Protein interactions for RNA: ENST00000307305.12

PHTF2-203, Transcript of putative homeodomain transcription factor 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PHTF2, Length 4,793 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF2-203ENST00000307305 FOXD4L6Q3SYB3 417 aaPredicted RBP14.32□□□□□ -0.12
PHTF2-203ENST00000307305 ZKSCAN2Q63HK3 967 aa14.32□□□□□ -0.12
PHTF2-203ENST00000307305 FOXD4L3Q6VB84 417 aaPredicted RBP14.32□□□□□ -0.12
PHTF2-203ENST00000307305 ERBINQ96RT1 1412 aa14.32□□□□□ -0.12
PHTF2-203ENST00000307305 DUSP27Q5VZP5 1158 aa14.31□□□□□ -0.12
PHTF2-203ENST00000307305 EIF3AQ14152 1382 aaKnown RBP14.31□□□□□ -0.12
PHTF2-203ENST00000307305 L1TD1Q5T7N2 865 aaKnown RBP14.31□□□□□ -0.12
PHTF2-203ENST00000307305 KDM6BO15054 1643 aa14.31□□□□□ -0.12
PHTF2-203ENST00000307305 HMOX1P09601 288 aa14.3□□□□□ -0.12
PHTF2-203ENST00000307305 PNNQ9H307 717 aaKnown RBP14.3□□□□□ -0.12
PHTF2-203ENST00000307305 CFAP43Q8NDM7 1665 aa14.3□□□□□ -0.12
PHTF2-203ENST00000307305 SLFN5Q08AF3 891 aa14.3□□□□□ -0.12
PHTF2-203ENST00000307305 IGHDP01880 384 aa14.3□□□□□ -0.12
PHTF2-203ENST00000307305 DZIP1LQ8IYY4 767 aaKnown RBP14.3□□□□□ -0.12
PHTF2-203ENST00000307305 CUL7Q14999 1698 aa14.29□□□□□ -0.12
PHTF2-203ENST00000307305 C1orf115Q9H7X2 142 aa14.29□□□□□ -0.12
PHTF2-203ENST00000307305 TNNQ9UQP3 1299 aa14.29□□□□□ -0.12
PHTF2-203ENST00000307305 MAGI3Q5TCQ9 1506 aa14.29□□□□□ -0.12
PHTF2-203ENST00000307305 RIPK4P57078 832 aa14.29□□□□□ -0.12
PHTF2-203ENST00000307305 RUNDC1Q96C34 613 aa14.29□□□□□ -0.12
PHTF2-203ENST00000307305 SPINK5Q9NQ38 1064 aaPredicted RBP14.28□□□□□ -0.12
PHTF2-203ENST00000307305 IPO8O15397 1037 aaKnown RBP14.28□□□□□ -0.12
PHTF2-203ENST00000307305 EXOSC9Q06265 439 aaKnown RBP14.28□□□□□ -0.12
PHTF2-203ENST00000307305 ARHGAP5Q13017 1502 aa14.28□□□□□ -0.12
PHTF2-203ENST00000307305 SLC4A10Q6U841 1118 aa14.27□□□□□ -0.12
PHTF2-203ENST00000307305 PTMAP06454 111 aaKnown RBP14.27□□□□□ -0.13
PHTF2-203ENST00000307305 TAOK2Q9UL54 1235 aa14.26□□□□□ -0.13
PHTF2-203ENST00000307305 HDGFL2Q7Z4V5 671 aaPredicted RBP14.26□□□□□ -0.13
PHTF2-203ENST00000307305 KIAA0586Q9BVV6 1533 aa14.25□□□□□ -0.13
PHTF2-203ENST00000307305 C22orf23Q9BZE7 217 aa14.25□□□□□ -0.13
PHTF2-203ENST00000307305 GPATCH8Q9UKJ3 1502 aaKnown RBP14.25□□□□□ -0.13
PHTF2-203ENST00000307305 GLIPR1L2Q4G1C9 344 aa14.25□□□□□ -0.13
PHTF2-203ENST00000307305 WWC1Q8IX03 1113 aa14.25□□□□□ -0.13
PHTF2-203ENST00000307305 PER1O15534 1290 aaPredicted RBP14.24□□□□□ -0.13
PHTF2-203ENST00000307305 DNTTIP2Q5QJE6 756 aaKnown RBP14.24□□□□□ -0.13
PHTF2-203ENST00000307305 NUP153P49790 1475 aaKnown RBP14.23□□□□□ -0.13
PHTF2-203ENST00000307305 SEC24BO95487 1268 aa14.23□□□□□ -0.13
PHTF2-203ENST00000307305 TESK2Q96S53 571 aa14.23□□□□□ -0.13
PHTF2-203ENST00000307305 DMRT2Q9Y5R5 561 aa14.22□□□□□ -0.13
PHTF2-203ENST00000307305 FBLN1P23142 703 aa14.22□□□□□ -0.13
PHTF2-203ENST00000307305 NECTIN2Q92692 538 aa14.22□□□□□ -0.13
PHTF2-203ENST00000307305 PLEKHH1Q9ULM0 1364 aa14.22□□□□□ -0.13
PHTF2-203ENST00000307305 THUMPD2Q9BTF0 503 aaKnown RBP14.21□□□□□ -0.13
PHTF2-203ENST00000307305 PLEKHH2Q8IVE3 1493 aa14.21□□□□□ -0.13
PHTF2-203ENST00000307305 TERF2IPQ9NYB0 399 aa14.21□□□□□ -0.13
PHTF2-203ENST00000307305 LMOD2Q6P5Q4 547 aa14.21□□□□□ -0.13
PHTF2-203ENST00000307305 ADGRF5Q8IZF2 1346 aa14.21□□□□□ -0.14
PHTF2-203ENST00000307305 PZPP20742 1482 aa14.2□□□□□ -0.14
PHTF2-203ENST00000307305 TEX14Q8IWB6 1497 aa14.2□□□□□ -0.14
PHTF2-203ENST00000307305 GBP4Q96PP9 640 aa14.2□□□□□ -0.14
PHTF2-203ENST00000307305 MRC2Q9UBG0 1479 aa14.2□□□□□ -0.14
PHTF2-203ENST00000307305 CASC1Q6TDU7 716 aa14.2□□□□□ -0.14
PHTF2-203ENST00000307305 CTTNBP2Q8WZ74 1663 aa14.2□□□□□ -0.14
PHTF2-203ENST00000307305 MAGI1Q96QZ7 1491 aaPredicted RBP14.19□□□□□ -0.14
PHTF2-203ENST00000307305 NOB1Q9ULX3 412 aaKnown RBP14.19□□□□□ -0.14
PHTF2-203ENST00000307305 EVC2Q86UK5 1308 aa14.19□□□□□ -0.14
PHTF2-203ENST00000307305 SYNJ2O15056 1496 aa14.19□□□□□ -0.14
PHTF2-203ENST00000307305 SCAPERQ9BY12 1400 aa14.18□□□□□ -0.14
PHTF2-203ENST00000307305 PDE3AQ14432 1141 aa14.18□□□□□ -0.14
PHTF2-203ENST00000307305 C8orf34Q49A92 452 aa14.18□□□□□ -0.14
PHTF2-203ENST00000307305 DDX49Q9Y6V7 483 aaKnown RBP14.18□□□□□ -0.14
PHTF2-203ENST00000307305 DIAPH1O60610 1272 aaKnown RBP14.18□□□□□ -0.14
PHTF2-203ENST00000307305 AMER1Q5JTC6 1135 aaPredicted RBP14.18□□□□□ -0.14
PHTF2-203ENST00000307305 SPATA31E1Q6ZUB1 1445 aa14.18□□□□□ -0.14
PHTF2-203ENST00000307305 DDX19BQ9UMR2 479 aa14.18□□□□□ -0.14
PHTF2-203ENST00000307305 LTV1Q96GA3 475 aaPredicted RBP14.17□□□□□ -0.14
PHTF2-203ENST00000307305 PCDHB15Q9Y5E8 787 aa14.17□□□□□ -0.14
PHTF2-203ENST00000307305 CHMP5Q9NZZ3 219 aa14.17□□□□□ -0.14
PHTF2-203ENST00000307305 RARSP54136 660 aaKnown RBP14.17□□□□□ -0.14
PHTF2-203ENST00000307305 TRAK2O60296 914 aa14.16□□□□□ -0.14
PHTF2-203ENST00000307305 LAMC3Q9Y6N6 1575 aa14.16□□□□□ -0.14
PHTF2-203ENST00000307305 PARD3Q8TEW0 1356 aa14.16□□□□□ -0.14
PHTF2-203ENST00000307305 TRIM6-TRIM34B2RNG4 842 aa14.16□□□□□ -0.14
PHTF2-203ENST00000307305 MSNP26038 577 aaKnown RBP14.16□□□□□ -0.14
PHTF2-203ENST00000307305 GRIN2AQ12879 1464 aa14.16□□□□□ -0.14
PHTF2-203ENST00000307305 TCOF1Q13428 1488 aaKnown RBP14.16□□□□□ -0.14
PHTF2-203ENST00000307305 RNF123Q5XPI4 1314 aa14.15□□□□□ -0.14
PHTF2-203ENST00000307305 RLBP1P12271 317 aa14.15□□□□□ -0.14
PHTF2-203ENST00000307305 IFT140Q96RY7 1462 aa14.14□□□□□ -0.15
PHTF2-203ENST00000307305 OS9Q13438 667 aaPredicted RBP14.14□□□□□ -0.15
PHTF2-203ENST00000307305 PRKAR2BP31323 418 aa14.14□□□□□ -0.15
PHTF2-203ENST00000307305 VGFO15240 615 aaPredicted RBP14.14□□□□□ -0.15
PHTF2-203ENST00000307305 ZNF428Q96B54 188 aa14.13□□□□□ -0.15
PHTF2-203ENST00000307305 TBC1D2Q9BYX2 928 aa14.13□□□□□ -0.15
PHTF2-203ENST00000307305 CALD1Q05682 793 aaKnown RBP14.13□□□□□ -0.15
PHTF2-203ENST00000307305 TMEM57Q8N5G2 664 aa14.13□□□□□ -0.15
PHTF2-203ENST00000307305 SSH1Q8WYL5 1049 aa14.13□□□□□ -0.15
PHTF2-203ENST00000307305 NSD3Q9BZ95 1437 aa14.12□□□□□ -0.15
PHTF2-203ENST00000307305 RALGAPBQ86X10 1494 aa14.12□□□□□ -0.15
PHTF2-203ENST00000307305 LRPPRCP42704 1394 aaKnown RBP14.12□□□□□ -0.15
PHTF2-203ENST00000307305 MVPQ14764 893 aaKnown RBP14.12□□□□□ -0.15
PHTF2-203ENST00000307305 MPNDQ8N594 471 aa14.12□□□□□ -0.15
PHTF2-203ENST00000307305 RTF1Q92541 710 aaKnown RBP14.12□□□□□ -0.15
PHTF2-203ENST00000307305 RILPL2Q969X0 211 aa14.12□□□□□ -0.15
PHTF2-203ENST00000307305 CCDC141Q6ZP82 1450 aa14.12□□□□□ -0.15
PHTF2-203ENST00000307305 CARD14Q9BXL6 1004 aa14.11□□□□□ -0.15
PHTF2-203ENST00000307305 RAPGEF3O95398 923 aa14.11□□□□□ -0.15
PHTF2-203ENST00000307305 PRAM1Q96QH2 718 aa14.11□□□□□ -0.15
PHTF2-203ENST00000307305 DENND4BO75064 1496 aaPredicted RBP14.11□□□□□ -0.15
PHTF2-203ENST00000307305 CHMP4BQ9H444 224 aaKnown RBP14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms