RNA–Protein interactions for RNA: ENST00000299543.8

CTDP1-202, Transcript of CTD phosphatase subunit 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTDP1, Length 3,380 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-202ENST00000299543 MAGI2Q86UL8 1455 aa17.53■□□□□ 0.4
CTDP1-202ENST00000299543 ABCC2Q92887 1545 aa17.53■□□□□ 0.4
CTDP1-202ENST00000299543 SCAPERQ9BY12 1400 aa17.53■□□□□ 0.4
CTDP1-202ENST00000299543 KANK1Q14678 1352 aa17.53■□□□□ 0.4
CTDP1-202ENST00000299543 GGT6Q6P531 493 aa17.53■□□□□ 0.4
CTDP1-202ENST00000299543 DUSP27Q5VZP5 1158 aa17.52■□□□□ 0.4
CTDP1-202ENST00000299543 TRAK1Q9UPV9 953 aa17.52■□□□□ 0.4
CTDP1-202ENST00000299543 ADGRF5Q8IZF2 1346 aa17.52■□□□□ 0.39
CTDP1-202ENST00000299543 FRAT1Q92837 279 aaPredicted RBP17.51■□□□□ 0.39
CTDP1-202ENST00000299543 PRDM15P57071 1507 aaPredicted RBP17.51■□□□□ 0.39
CTDP1-202ENST00000299543 ARXQ96QS3 562 aa17.51■□□□□ 0.39
CTDP1-202ENST00000299543 VSIG10Q8N0Z9 540 aa17.5■□□□□ 0.39
CTDP1-202ENST00000299543 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.5■□□□□ 0.39
CTDP1-202ENST00000299543 CANXP27824 592 aaKnown RBP17.49■□□□□ 0.39
CTDP1-202ENST00000299543 SPINK5Q9NQ38 1064 aaPredicted RBP17.49■□□□□ 0.39
CTDP1-202ENST00000299543 DAXXQ9UER7 740 aaPredicted RBP17.49■□□□□ 0.39
CTDP1-202ENST00000299543 MYO5CQ9NQX4 1742 aa17.49■□□□□ 0.39
CTDP1-202ENST00000299543 E9PCH4 1651 aa17.49■□□□□ 0.39
CTDP1-202ENST00000299543 BCAR3O75815 825 aa17.49■□□□□ 0.39
CTDP1-202ENST00000299543 RRP7AQ9Y3A4 280 aaKnown RBP17.49■□□□□ 0.39
CTDP1-202ENST00000299543 UNC13BO14795 1591 aa17.49■□□□□ 0.39
CTDP1-202ENST00000299543 TMEM132EQ6IEE7 984 aa17.48■□□□□ 0.39
CTDP1-202ENST00000299543 BLMP54132 1417 aaPredicted RBP17.47■□□□□ 0.39
CTDP1-202ENST00000299543 WDR7Q9Y4E6 1490 aa17.47■□□□□ 0.39
CTDP1-202ENST00000299543 IQGAP3Q86VI3 1631 aa17.47■□□□□ 0.39
CTDP1-202ENST00000299543 MAST1Q9Y2H9 1570 aa17.47■□□□□ 0.39
CTDP1-202ENST00000299543 MS4A1P11836 297 aa17.46■□□□□ 0.39
CTDP1-202ENST00000299543 SAFB2Q14151 953 aaKnown RBP eCLIP17.46■□□□□ 0.39
CTDP1-202ENST00000299543 GSE1Q14687 1217 aa17.46■□□□□ 0.39
CTDP1-202ENST00000299543 CARD14Q9BXL6 1004 aa17.45■□□□□ 0.38
CTDP1-202ENST00000299543 ZMYND15Q9H091 742 aa17.45■□□□□ 0.38
CTDP1-202ENST00000299543 SCAF11Q99590 1463 aaKnown RBP17.45■□□□□ 0.38
CTDP1-202ENST00000299543 EIF3AQ14152 1382 aaKnown RBP17.45■□□□□ 0.38
CTDP1-202ENST00000299543 SLFN5Q08AF3 891 aa17.45■□□□□ 0.38
CTDP1-202ENST00000299543 EIF2AK4Q9P2K8 1649 aaKnown RBP17.44■□□□□ 0.38
CTDP1-202ENST00000299543 SLC12A5Q9H2X9 1139 aa17.44■□□□□ 0.38
CTDP1-202ENST00000299543 DMRT2Q9Y5R5 561 aa17.44■□□□□ 0.38
CTDP1-202ENST00000299543 ATP10AO60312 1499 aa17.44■□□□□ 0.38
CTDP1-202ENST00000299543 MORC1Q86VD1 984 aa17.43■□□□□ 0.38
CTDP1-202ENST00000299543 PLXNC1O60486 1568 aa17.42■□□□□ 0.38
CTDP1-202ENST00000299543 CENPQQ7L2Z9 268 aaPredicted RBP17.41■□□□□ 0.38
CTDP1-202ENST00000299543 NPM1P06748 294 aaKnown RBP eCLIP17.4■□□□□ 0.38
CTDP1-202ENST00000299543 ZMYM4Q5VZL5 1548 aa17.4■□□□□ 0.38
CTDP1-202ENST00000299543 NFKBIBQ15653 356 aa17.4■□□□□ 0.38
CTDP1-202ENST00000299543 BCL2L13Q9BXK5 485 aa17.4■□□□□ 0.38
CTDP1-202ENST00000299543 FANCAO15360 1455 aa17.4■□□□□ 0.38
CTDP1-202ENST00000299543 UGGT1Q9NYU2 1555 aa17.4■□□□□ 0.38
CTDP1-202ENST00000299543 ABCC1P33527 1531 aa17.39■□□□□ 0.38
CTDP1-202ENST00000299543 ZCCHC11Q5TAX3 1644 aaKnown RBP17.39■□□□□ 0.37
CTDP1-202ENST00000299543 STAC3Q96MF2 364 aa17.39■□□□□ 0.37
CTDP1-202ENST00000299543 COG6Q9Y2V7 657 aa17.39■□□□□ 0.37
CTDP1-202ENST00000299543 PANK1Q8TE04 598 aa17.38■□□□□ 0.37
CTDP1-202ENST00000299543 CENPJQ9HC77 1338 aaPredicted RBP17.38■□□□□ 0.37
CTDP1-202ENST00000299543 ASXL1Q8IXJ9 1541 aa17.37■□□□□ 0.37
CTDP1-202ENST00000299543 E9PSI1 815 aa17.37■□□□□ 0.37
CTDP1-202ENST00000299543 STK26Q9P289 416 aa17.36■□□□□ 0.37
CTDP1-202ENST00000299543 ZNF521Q96K83 1311 aa17.36■□□□□ 0.37
CTDP1-202ENST00000299543 GLIPR1L2Q4G1C9 344 aa17.36■□□□□ 0.37
CTDP1-202ENST00000299543 ADGRL1O94910 1474 aa17.36■□□□□ 0.37
CTDP1-202ENST00000299543 CLUAP1Q96AJ1 413 aa17.35■□□□□ 0.37
CTDP1-202ENST00000299543 DDRGK1Q96HY6 314 aa17.35■□□□□ 0.37
CTDP1-202ENST00000299543 CFAP65Q6ZU64 1925 aaKnown RBP17.34■□□□□ 0.37
CTDP1-202ENST00000299543 USP35Q9P2H5 1018 aa17.34■□□□□ 0.37
CTDP1-202ENST00000299543 FAM161AQ3B820 660 aa17.34■□□□□ 0.37
CTDP1-202ENST00000299543 CLTCL1P53675 1640 aa17.33■□□□□ 0.37
CTDP1-202ENST00000299543 RTEL1-TNFRSF6BF6WH68 1400 aa17.33■□□□□ 0.37
CTDP1-202ENST00000299543 KDM2BQ8NHM5 1336 aa17.33■□□□□ 0.37
CTDP1-202ENST00000299543 SHROOM2Q13796 1616 aa17.33■□□□□ 0.36
CTDP1-202ENST00000299543 MADDQ8WXG6 1647 aa17.33■□□□□ 0.36
CTDP1-202ENST00000299543 PTPRTO14522 1441 aa17.33■□□□□ 0.36
CTDP1-202ENST00000299543 MTHFSP49914 203 aa17.32■□□□□ 0.36
CTDP1-202ENST00000299543 WWC1Q8IX03 1113 aa17.32■□□□□ 0.36
CTDP1-202ENST00000299543 PODXL2Q9NZ53 605 aa17.32■□□□□ 0.36
CTDP1-202ENST00000299543 NOS1P29475 1434 aa17.32■□□□□ 0.36
CTDP1-202ENST00000299543 RSPH6AQ9H0K4 717 aa17.32■□□□□ 0.36
CTDP1-202ENST00000299543 LAMC1P11047 1609 aa17.32■□□□□ 0.36
CTDP1-202ENST00000299543 TRPM2O94759 1503 aa17.32■□□□□ 0.36
CTDP1-202ENST00000299543 PPM1GO15355 546 aaPredicted RBP17.32■□□□□ 0.36
CTDP1-202ENST00000299543 SLC24A1O60721 1099 aa17.31■□□□□ 0.36
CTDP1-202ENST00000299543 IGHDP01880 384 aa17.31■□□□□ 0.36
CTDP1-202ENST00000299543 TCP11L2Q8N4U5 519 aa17.31■□□□□ 0.36
CTDP1-202ENST00000299543 INSRP06213 1382 aa17.31■□□□□ 0.36
CTDP1-202ENST00000299543 ZFYVE16Q7Z3T8 1539 aa17.31■□□□□ 0.36
CTDP1-202ENST00000299543 U2AF1L5P0DN76 240 aaPredicted RBP17.31■□□□□ 0.36
CTDP1-202ENST00000299543 U2AF1Q01081 240 aaKnown RBP eCLIP17.31■□□□□ 0.36
CTDP1-202ENST00000299543 PIK3C2GO75747 1445 aa17.3■□□□□ 0.36
CTDP1-202ENST00000299543 RRAGDQ9NQL2 400 aaPredicted RBP17.3■□□□□ 0.36
CTDP1-202ENST00000299543 NSD3Q9BZ95 1437 aa17.3■□□□□ 0.36
CTDP1-202ENST00000299543 FRAT2O75474 233 aaPredicted RBP17.3■□□□□ 0.36
CTDP1-202ENST00000299543 CABP2Q9NPB3 220 aa17.3■□□□□ 0.36
CTDP1-202ENST00000299543 ATP7AQ04656 1500 aa17.29■□□□□ 0.36
CTDP1-202ENST00000299543 U2SURPO15042 1029 aaKnown RBP17.29■□□□□ 0.36
CTDP1-202ENST00000299543 RAPGEF3O95398 923 aa17.29■□□□□ 0.36
CTDP1-202ENST00000299543 TNNQ9UQP3 1299 aa17.29■□□□□ 0.36
CTDP1-202ENST00000299543 C8orf34Q49A92 452 aa17.28■□□□□ 0.36
CTDP1-202ENST00000299543 NKTRP30414 1462 aaKnown RBP17.28■□□□□ 0.36
CTDP1-202ENST00000299543 ERVK-7P63135 1459 aa17.28■□□□□ 0.36
CTDP1-202ENST00000299543 CFAP53Q96M91 514 aa17.27■□□□□ 0.36
CTDP1-202ENST00000299543 TRMT2AQ8IZ69 625 aaKnown RBP17.27■□□□□ 0.35
CTDP1-202ENST00000299543 SRPK2P78362 688 aaKnown RBP17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 187.4 ms