RNA–Protein interactions for RNA: ENST00000299366.11

CDH23-202, Transcript of cadherin related 23, humanhuman

TSL 5 BASIC

Gene CDH23, Length 3,954 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23-202ENST00000299366 NGDNQ8NEJ9 315 aaKnown RBP18.51■□□□□ 0.55
CDH23-202ENST00000299366 C1orf115Q9H7X2 142 aa18.51■□□□□ 0.55
CDH23-202ENST00000299366 RILPL2Q969X0 211 aa18.5■□□□□ 0.55
CDH23-202ENST00000299366 GOLGA6L4A6NEF3 574 aa18.5■□□□□ 0.55
CDH23-202ENST00000299366 NCOA1Q15788 1441 aa18.49■□□□□ 0.55
CDH23-202ENST00000299366 ZRSR1Q15695 479 aaKnown RBP18.49■□□□□ 0.55
CDH23-202ENST00000299366 BRD4O60885 1362 aaPredicted RBP18.48■□□□□ 0.55
CDH23-202ENST00000299366 AMPHP49418 695 aa18.48■□□□□ 0.55
CDH23-202ENST00000299366 STK31Q9BXU1 1019 aa18.48■□□□□ 0.55
CDH23-202ENST00000299366 TULP1O00294 542 aaPredicted RBP18.48■□□□□ 0.55
CDH23-202ENST00000299366 CC2D2AQ9P2K1 1620 aa18.48■□□□□ 0.55
CDH23-202ENST00000299366 NUTM2GQ5VZR2 741 aa18.47■□□□□ 0.55
CDH23-202ENST00000299366 TOPBP1Q92547 1522 aa18.47■□□□□ 0.55
CDH23-202ENST00000299366 DDX49Q9Y6V7 483 aaKnown RBP18.46■□□□□ 0.55
CDH23-202ENST00000299366 EVC2Q86UK5 1308 aa18.46■□□□□ 0.55
CDH23-202ENST00000299366 RUNDC1Q96C34 613 aa18.45■□□□□ 0.54
CDH23-202ENST00000299366 DIAPH1O60610 1272 aaKnown RBP18.45■□□□□ 0.54
CDH23-202ENST00000299366 KIAA1211Q6ZU35 1233 aa18.45■□□□□ 0.54
CDH23-202ENST00000299366 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.45■□□□□ 0.54
CDH23-202ENST00000299366 CALD1Q05682 793 aaKnown RBP18.45■□□□□ 0.54
CDH23-202ENST00000299366 EXOSC9Q06265 439 aaKnown RBP18.45■□□□□ 0.54
CDH23-202ENST00000299366 VGFO15240 615 aaPredicted RBP18.44■□□□□ 0.54
CDH23-202ENST00000299366 EIF2S2P20042 333 aaKnown RBP18.44■□□□□ 0.54
CDH23-202ENST00000299366 MCCP23508 829 aa18.43■□□□□ 0.54
CDH23-202ENST00000299366 NGEFQ8N5V2 710 aa18.43■□□□□ 0.54
CDH23-202ENST00000299366 CHMP3Q9Y3E7 222 aa18.43■□□□□ 0.54
CDH23-202ENST00000299366 PDZRN3Q9UPQ7 1066 aa18.42■□□□□ 0.54
CDH23-202ENST00000299366 KIAA1107Q9UPP5 1409 aa18.42■□□□□ 0.54
CDH23-202ENST00000299366 DRC7Q8IY82 874 aa18.41■□□□□ 0.54
CDH23-202ENST00000299366 PTPN23Q9H3S7 1636 aa18.41■□□□□ 0.54
CDH23-202ENST00000299366 C22orf23Q9BZE7 217 aa18.4■□□□□ 0.54
CDH23-202ENST00000299366 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.4■□□□□ 0.54
CDH23-202ENST00000299366 CSB-PGBD3P0DP91 1061 aa18.39■□□□□ 0.53
CDH23-202ENST00000299366 COG3Q96JB2 828 aa18.39■□□□□ 0.53
CDH23-202ENST00000299366 ANKRD30BQ9BXX2 1392 aa18.39■□□□□ 0.53
CDH23-202ENST00000299366 MAP3K1Q13233 1512 aa18.38■□□□□ 0.53
CDH23-202ENST00000299366 THUMPD2Q9BTF0 503 aaKnown RBP18.38■□□□□ 0.53
CDH23-202ENST00000299366 DAPK1P53355 1430 aa18.38■□□□□ 0.53
CDH23-202ENST00000299366 C9orf84Q5VXU9 1444 aa18.38■□□□□ 0.53
CDH23-202ENST00000299366 DDX19BQ9UMR2 479 aa18.38■□□□□ 0.53
CDH23-202ENST00000299366 BIVM-ERCC5R4GMW8 1640 aa18.38■□□□□ 0.53
CDH23-202ENST00000299366 PRKAR2BP31323 418 aa18.36■□□□□ 0.53
CDH23-202ENST00000299366 HDGFP51858 240 aaKnown RBP18.35■□□□□ 0.53
CDH23-202ENST00000299366 BCL11BQ9C0K0 894 aaPredicted RBP18.35■□□□□ 0.53
CDH23-202ENST00000299366 HMMRO75330 724 aa18.34■□□□□ 0.53
CDH23-202ENST00000299366 MPNDQ8N594 471 aa18.34■□□□□ 0.53
CDH23-202ENST00000299366 PEG3Q9GZU2 1588 aa18.34■□□□□ 0.53
CDH23-202ENST00000299366 RAPGEF3O95398 923 aa18.33■□□□□ 0.53
CDH23-202ENST00000299366 FBLN1P23142 703 aa18.32■□□□□ 0.52
CDH23-202ENST00000299366 FKBP5Q13451 457 aaPredicted RBP18.32■□□□□ 0.52
CDH23-202ENST00000299366 ANO2Q9NQ90 1003 aa18.32■□□□□ 0.52
CDH23-202ENST00000299366 PRAM1Q96QH2 718 aa18.32■□□□□ 0.52
CDH23-202ENST00000299366 EPRSP07814 1512 aaKnown RBP18.32■□□□□ 0.52
CDH23-202ENST00000299366 MIA2Q96PC5 1412 aa18.31■□□□□ 0.52
CDH23-202ENST00000299366 NOB1Q9ULX3 412 aaKnown RBP18.31■□□□□ 0.52
CDH23-202ENST00000299366 PLB1Q6P1J6 1458 aa18.31■□□□□ 0.52
CDH23-202ENST00000299366 HMGXB3Q12766 1538 aa18.31■□□□□ 0.52
CDH23-202ENST00000299366 ST18O60284 1047 aa18.31■□□□□ 0.52
CDH23-202ENST00000299366 VSIG10Q8N0Z9 540 aa18.31■□□□□ 0.52
CDH23-202ENST00000299366 GRIN2BQ13224 1484 aa18.3■□□□□ 0.52
CDH23-202ENST00000299366 SCAPERQ9BY12 1400 aa18.3■□□□□ 0.52
CDH23-202ENST00000299366 RNF214Q8ND24 703 aa18.3■□□□□ 0.52
CDH23-202ENST00000299366 CHMP5Q9NZZ3 219 aa18.3■□□□□ 0.52
CDH23-202ENST00000299366 TROQ12816 1431 aaPredicted RBP18.3■□□□□ 0.52
CDH23-202ENST00000299366 RSPH6AQ9H0K4 717 aa18.29■□□□□ 0.52
CDH23-202ENST00000299366 CABP1Q9NZU7 370 aa18.29■□□□□ 0.52
CDH23-202ENST00000299366 ARHGAP5Q13017 1502 aa18.29■□□□□ 0.52
CDH23-202ENST00000299366 ABCC5O15440 1437 aa18.29■□□□□ 0.52
CDH23-202ENST00000299366 MCTP1Q6DN14 999 aa18.28■□□□□ 0.52
CDH23-202ENST00000299366 ARHGEF11O15085 1522 aa18.28■□□□□ 0.52
CDH23-202ENST00000299366 NPHP1O15259 732 aa18.27■□□□□ 0.52
CDH23-202ENST00000299366 LMOD3Q0VAK6 560 aa18.27■□□□□ 0.51
CDH23-202ENST00000299366 WWC1Q8IX03 1113 aa18.27■□□□□ 0.51
CDH23-202ENST00000299366 TXNDC2Q86VQ3 553 aa18.26■□□□□ 0.51
CDH23-202ENST00000299366 DHX29Q7Z478 1369 aaKnown RBP18.25■□□□□ 0.51
CDH23-202ENST00000299366 EHBP1L1Q8N3D4 1523 aa18.25■□□□□ 0.51
CDH23-202ENST00000299366 DDX11L8A8MPP1 907 aa18.25■□□□□ 0.51
CDH23-202ENST00000299366 HSP90B1P14625 803 aaKnown RBP18.25■□□□□ 0.51
CDH23-202ENST00000299366 RRS1Q15050 365 aaKnown RBP18.25■□□□□ 0.51
CDH23-202ENST00000299366 SLFN5Q08AF3 891 aa18.24■□□□□ 0.51
CDH23-202ENST00000299366 DCTN1Q14203 1278 aa18.24■□□□□ 0.51
CDH23-202ENST00000299366 ERBINQ96RT1 1412 aa18.24■□□□□ 0.51
CDH23-202ENST00000299366 RPRD2Q5VT52 1461 aaKnown RBP18.24■□□□□ 0.51
CDH23-202ENST00000299366 EFCAB5A4FU69 1503 aa18.24■□□□□ 0.51
CDH23-202ENST00000299366 KIAA2012Q0VF49 1180 aa18.24■□□□□ 0.51
CDH23-202ENST00000299366 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.24■□□□□ 0.51
CDH23-202ENST00000299366 FOSBP53539 338 aa18.23■□□□□ 0.51
CDH23-202ENST00000299366 TSPYL4Q9UJ04 414 aa18.23■□□□□ 0.51
CDH23-202ENST00000299366 TRAK2O60296 914 aa18.23■□□□□ 0.51
CDH23-202ENST00000299366 MIS18AQ9NYP9 233 aa18.22■□□□□ 0.51
CDH23-202ENST00000299366 SNAPC4Q5SXM2 1469 aa18.22■□□□□ 0.51
CDH23-202ENST00000299366 FAM69CQ0P6D2 419 aa18.22■□□□□ 0.51
CDH23-202ENST00000299366 TEFQ10587 303 aa18.22■□□□□ 0.51
CDH23-202ENST00000299366 GORABQ5T7V8 394 aa18.22■□□□□ 0.51
CDH23-202ENST00000299366 EID1Q9Y6B2 187 aa18.22■□□□□ 0.51
CDH23-202ENST00000299366 ZNF608Q9ULD9 1512 aaPredicted RBP18.21■□□□□ 0.51
CDH23-202ENST00000299366 AIMP1Q12904 312 aaKnown RBP18.21■□□□□ 0.51
CDH23-202ENST00000299366 URB2Q14146 1524 aaKnown RBP18.21■□□□□ 0.51
CDH23-202ENST00000299366 KIF16BQ96L93 1317 aa18.2■□□□□ 0.5
CDH23-202ENST00000299366 TNNQ9UQP3 1299 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms