RNA–Protein interactions for RNA: ENST00000297615.9

TTC39B-201, Transcript of tetratricopeptide repeat domain 39B, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TTC39B, Length 3,053 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39B-201ENST00000297615 DMRT2Q9Y5R5 561 aa17.87■□□□□ 0.45
TTC39B-201ENST00000297615 PLEKHG5O94827 1062 aa17.87■□□□□ 0.45
TTC39B-201ENST00000297615 DUOX2Q9NRD8 1548 aa17.87■□□□□ 0.45
TTC39B-201ENST00000297615 BRD4O60885 1362 aaPredicted RBP17.87■□□□□ 0.45
TTC39B-201ENST00000297615 SRPK2P78362 688 aaKnown RBP17.87■□□□□ 0.45
TTC39B-201ENST00000297615 IDI1Q13907 227 aa17.86■□□□□ 0.45
TTC39B-201ENST00000297615 AMER1Q5JTC6 1135 aaPredicted RBP17.86■□□□□ 0.45
TTC39B-201ENST00000297615 MORC1Q86VD1 984 aa17.85■□□□□ 0.45
TTC39B-201ENST00000297615 NOS1P29475 1434 aa17.84■□□□□ 0.45
TTC39B-201ENST00000297615 ANP32AP39687 249 aaKnown RBP17.84■□□□□ 0.45
TTC39B-201ENST00000297615 ATP10AO60312 1499 aa17.83■□□□□ 0.45
TTC39B-201ENST00000297615 FRAT1Q92837 279 aaPredicted RBP17.83■□□□□ 0.45
TTC39B-201ENST00000297615 MAGI2Q86UL8 1455 aa17.83■□□□□ 0.45
TTC39B-201ENST00000297615 BCAR3O75815 825 aa17.82■□□□□ 0.44
TTC39B-201ENST00000297615 GGNBP2Q9H3C7 697 aa17.82■□□□□ 0.44
TTC39B-201ENST00000297615 NOP58Q9Y2X3 529 aaKnown RBP17.82■□□□□ 0.44
TTC39B-201ENST00000297615 SOX12O15370 315 aa17.82■□□□□ 0.44
TTC39B-201ENST00000297615 U2SURPO15042 1029 aaKnown RBP17.81■□□□□ 0.44
TTC39B-201ENST00000297615 POLR1AO95602 1720 aaPredicted RBP17.81■□□□□ 0.44
TTC39B-201ENST00000297615 PARD3Q8TEW0 1356 aa17.81■□□□□ 0.44
TTC39B-201ENST00000297615 ABCC1P33527 1531 aa17.81■□□□□ 0.44
TTC39B-201ENST00000297615 RGS3P49796 1198 aa17.8■□□□□ 0.44
TTC39B-201ENST00000297615 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.8■□□□□ 0.44
TTC39B-201ENST00000297615 POGKQ9P215 609 aa17.8■□□□□ 0.44
TTC39B-201ENST00000297615 CENPJQ9HC77 1338 aaPredicted RBP17.8■□□□□ 0.44
TTC39B-201ENST00000297615 CLUAP1Q96AJ1 413 aa17.79■□□□□ 0.44
TTC39B-201ENST00000297615 SHROOM2Q13796 1616 aa17.79■□□□□ 0.44
TTC39B-201ENST00000297615 CLASP1Q7Z460 1538 aa17.78■□□□□ 0.44
TTC39B-201ENST00000297615 LRPPRCP42704 1394 aaKnown RBP17.78■□□□□ 0.44
TTC39B-201ENST00000297615 CDCA8Q53HL2 280 aa17.78■□□□□ 0.44
TTC39B-201ENST00000297615 PLEKHH1Q9ULM0 1364 aa17.77■□□□□ 0.44
TTC39B-201ENST00000297615 MTHFSP49914 203 aa17.77■□□□□ 0.44
TTC39B-201ENST00000297615 WAPLQ7Z5K2 1190 aa17.77■□□□□ 0.44
TTC39B-201ENST00000297615 CANXP27824 592 aaKnown RBP17.77■□□□□ 0.43
TTC39B-201ENST00000297615 ZBTB47Q9UFB7 747 aaPredicted RBP17.77■□□□□ 0.43
TTC39B-201ENST00000297615 ATP7AQ04656 1500 aa17.76■□□□□ 0.43
TTC39B-201ENST00000297615 LAS1LQ9Y4W2 734 aaKnown RBP17.75■□□□□ 0.43
TTC39B-201ENST00000297615 COL17A1Q9UMD9 1497 aaPredicted RBP17.75■□□□□ 0.43
TTC39B-201ENST00000297615 U2AF1L5P0DN76 240 aaPredicted RBP17.75■□□□□ 0.43
TTC39B-201ENST00000297615 U2AF1Q01081 240 aaKnown RBP eCLIP17.75■□□□□ 0.43
TTC39B-201ENST00000297615 MAST1Q9Y2H9 1570 aa17.75■□□□□ 0.43
TTC39B-201ENST00000297615 NCKAP5LQ9HCH0 1330 aa17.74■□□□□ 0.43
TTC39B-201ENST00000297615 RNF123Q5XPI4 1314 aa17.74■□□□□ 0.43
TTC39B-201ENST00000297615 GOLGA2Q08379 1002 aa17.74■□□□□ 0.43
TTC39B-201ENST00000297615 TNNQ9UQP3 1299 aa17.74■□□□□ 0.43
TTC39B-201ENST00000297615 PRAM1Q96QH2 718 aa17.73■□□□□ 0.43
TTC39B-201ENST00000297615 GPRASP1Q5JY77 1395 aa17.73■□□□□ 0.43
TTC39B-201ENST00000297615 TRPM1Q7Z4N2 1603 aa17.73■□□□□ 0.43
TTC39B-201ENST00000297615 SLC4A3P48751 1232 aa17.73■□□□□ 0.43
TTC39B-201ENST00000297615 ZFYVE16Q7Z3T8 1539 aa17.72■□□□□ 0.43
TTC39B-201ENST00000297615 YEATS2Q9ULM3 1422 aa17.72■□□□□ 0.43
TTC39B-201ENST00000297615 E9PCH4 1651 aa17.72■□□□□ 0.43
TTC39B-201ENST00000297615 PRDM15P57071 1507 aaPredicted RBP17.7■□□□□ 0.42
TTC39B-201ENST00000297615 TCERG1O14776 1098 aaKnown RBP17.7■□□□□ 0.42
TTC39B-201ENST00000297615 PANK1Q8TE04 598 aa17.7■□□□□ 0.42
TTC39B-201ENST00000297615 CLTCL1P53675 1640 aa17.7■□□□□ 0.42
TTC39B-201ENST00000297615 SCAF11Q99590 1463 aaKnown RBP17.69■□□□□ 0.42
TTC39B-201ENST00000297615 NPATQ14207 1427 aa17.69■□□□□ 0.42
TTC39B-201ENST00000297615 PDE4AP27815 886 aa17.69■□□□□ 0.42
TTC39B-201ENST00000297615 IPO9Q96P70 1041 aaKnown RBP17.69■□□□□ 0.42
TTC39B-201ENST00000297615 DUSP27Q5VZP5 1158 aa17.68■□□□□ 0.42
TTC39B-201ENST00000297615 UHRF1BP1LA0JNW5 1464 aa17.68■□□□□ 0.42
TTC39B-201ENST00000297615 ESF1Q9H501 851 aaKnown RBP17.68■□□□□ 0.42
TTC39B-201ENST00000297615 COG6Q9Y2V7 657 aa17.68■□□□□ 0.42
TTC39B-201ENST00000297615 CEBPAP49715 358 aaPredicted RBP17.68■□□□□ 0.42
TTC39B-201ENST00000297615 NSD3Q9BZ95 1437 aa17.67■□□□□ 0.42
TTC39B-201ENST00000297615 IQGAP3Q86VI3 1631 aa17.67■□□□□ 0.42
TTC39B-201ENST00000297615 DEKP35659 375 aaKnown RBP17.67■□□□□ 0.42
TTC39B-201ENST00000297615 PDE3BQ13370 1112 aa17.67■□□□□ 0.42
TTC39B-201ENST00000297615 UNC13BO14795 1591 aa17.67■□□□□ 0.42
TTC39B-201ENST00000297615 C14orf93Q9H972 538 aaKnown RBP17.67■□□□□ 0.42
TTC39B-201ENST00000297615 TSR2Q969E8 191 aaKnown RBP17.66■□□□□ 0.42
TTC39B-201ENST00000297615 VGFO15240 615 aaPredicted RBP17.66■□□□□ 0.42
TTC39B-201ENST00000297615 TCP11L2Q8N4U5 519 aa17.66■□□□□ 0.42
TTC39B-201ENST00000297615 EIF3AQ14152 1382 aaKnown RBP17.66■□□□□ 0.42
TTC39B-201ENST00000297615 CABP1Q9NZU7 370 aa17.66■□□□□ 0.42
TTC39B-201ENST00000297615 ZRANB1Q9UGI0 708 aa17.66■□□□□ 0.42
TTC39B-201ENST00000297615 TXNDC2Q86VQ3 553 aa17.65■□□□□ 0.42
TTC39B-201ENST00000297615 ELL2O00472 640 aaPredicted RBP17.65■□□□□ 0.42
TTC39B-201ENST00000297615 RTEL1-TNFRSF6BF6WH68 1400 aa17.64■□□□□ 0.42
TTC39B-201ENST00000297615 RTL5Q5HYW3 569 aaPredicted RBP17.64■□□□□ 0.41
TTC39B-201ENST00000297615 RBM33Q96EV2 1170 aaKnown RBP17.63■□□□□ 0.41
TTC39B-201ENST00000297615 PLXNC1O60486 1568 aa17.63■□□□□ 0.41
TTC39B-201ENST00000297615 HMOX1P09601 288 aa17.62■□□□□ 0.41
TTC39B-201ENST00000297615 ZNF518AQ6AHZ1 1483 aa17.61■□□□□ 0.41
TTC39B-201ENST00000297615 PTPRTO14522 1441 aa17.61■□□□□ 0.41
TTC39B-201ENST00000297615 THUMPD2Q9BTF0 503 aaKnown RBP17.61■□□□□ 0.41
TTC39B-201ENST00000297615 SLFN5Q08AF3 891 aa17.6■□□□□ 0.41
TTC39B-201ENST00000297615 WWC1Q8IX03 1113 aa17.58■□□□□ 0.41
TTC39B-201ENST00000297615 CDK19Q9BWU1 502 aa17.58■□□□□ 0.41
TTC39B-201ENST00000297615 EVC2Q86UK5 1308 aa17.58■□□□□ 0.41
TTC39B-201ENST00000297615 ERVK-7P63135 1459 aa17.58■□□□□ 0.4
TTC39B-201ENST00000297615 SLC26A8Q96RN1 970 aa17.57■□□□□ 0.4
TTC39B-201ENST00000297615 TRPM2O94759 1503 aa17.56■□□□□ 0.4
TTC39B-201ENST00000297615 BACH2Q9BYV9 841 aa17.56■□□□□ 0.4
TTC39B-201ENST00000297615 POGZQ7Z3K3 1410 aa17.56■□□□□ 0.4
TTC39B-201ENST00000297615 CGNL1Q0VF96 1302 aa17.55■□□□□ 0.4
TTC39B-201ENST00000297615 TRHP20396 242 aaPredicted RBP17.55■□□□□ 0.4
TTC39B-201ENST00000297615 MADDQ8WXG6 1647 aa17.55■□□□□ 0.4
TTC39B-201ENST00000297615 TSPOAP1O95153 1857 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms