RNA–Protein interactions for RNA: ENST00000288447.8

DMD-201, Transcript of dystrophin, humanhuman

TSL 1 (best) BASIC

Gene DMD, Length 3,856 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DMD-201ENST00000288447 KCNV2Q8TDN2 545 aa4.36□□□□□ -1.71
DMD-201ENST00000288447 SYNPO2Q9UMS6 1093 aa4.36□□□□□ -1.71
DMD-201ENST00000288447 CALD1Q05682 793 aaKnown RBP4.36□□□□□ -1.71
DMD-201ENST00000288447 CASC1Q6TDU7 716 aa4.36□□□□□ -1.71
DMD-201ENST00000288447 GEMIN8Q9NWZ8 242 aaKnown RBP4.36□□□□□ -1.71
DMD-201ENST00000288447 CCDC194A0A1B0GVG4 234 aa4.35□□□□□ -1.71
DMD-201ENST00000288447 NOL8Q76FK4 1167 aaKnown RBP4.35□□□□□ -1.71
DMD-201ENST00000288447 LARGE2Q8N3Y3 721 aa4.35□□□□□ -1.71
DMD-201ENST00000288447 FAM193AP78312 1265 aa4.35□□□□□ -1.71
DMD-201ENST00000288447 MTA1Q13330 715 aa4.35□□□□□ -1.71
DMD-201ENST00000288447 RBM46Q8TBY0 533 aaKnown RBP4.35□□□□□ -1.71
DMD-201ENST00000288447 SMARCA5O60264 1052 aaPredicted RBP4.35□□□□□ -1.71
DMD-201ENST00000288447 FAM200BP0CF97 657 aa4.35□□□□□ -1.71
DMD-201ENST00000288447 COPB2P35606 906 aa4.35□□□□□ -1.71
DMD-201ENST00000288447 PSME1Q06323 249 aa4.35□□□□□ -1.71
DMD-201ENST00000288447 MSL3Q8N5Y2 521 aaKnown RBP4.35□□□□□ -1.71
DMD-201ENST00000288447 EPAS1Q99814 870 aa4.35□□□□□ -1.71
DMD-201ENST00000288447 PLEKHG3A1L390 1219 aa4.34□□□□□ -1.71
DMD-201ENST00000288447 CFAP69A5D8W1 941 aa4.34□□□□□ -1.71
DMD-201ENST00000288447 SRPK2P78362 688 aaKnown RBP4.34□□□□□ -1.71
DMD-201ENST00000288447 NBPF10Q6P3W6 841 aaKnown RBP4.34□□□□□ -1.71
DMD-201ENST00000288447 AEBP1Q8IUX7 1158 aa4.34□□□□□ -1.71
DMD-201ENST00000288447 EGFL6Q8IUX8 553 aa4.34□□□□□ -1.71
DMD-201ENST00000288447 WWC1Q8IX03 1113 aa4.34□□□□□ -1.71
DMD-201ENST00000288447 IRF2BPLQ9H1B7 796 aa4.34□□□□□ -1.71
DMD-201ENST00000288447 SF3A1Q15459 793 aaKnown RBP4.34□□□□□ -1.71
DMD-201ENST00000288447 CDC37Q16543 378 aaPredicted RBP4.34□□□□□ -1.71
DMD-201ENST00000288447 ARHGEF10LQ9HCE6 1279 aa4.34□□□□□ -1.71
DMD-201ENST00000288447 ZNF69Q9UC07 566 aa4.34□□□□□ -1.71
DMD-201ENST00000288447 APBB1IPQ7Z5R6 666 aaPredicted RBP4.34□□□□□ -1.72
DMD-201ENST00000288447 PROSER2Q86WR7 435 aaPredicted RBP4.34□□□□□ -1.72
DMD-201ENST00000288447 YY1AP1Q9H869 796 aa4.34□□□□□ -1.72
DMD-201ENST00000288447 EGFLAMQ63HQ2 1017 aa4.33□□□□□ -1.72
DMD-201ENST00000288447 DNAJC14Q6Y2X3 702 aaPredicted RBP4.33□□□□□ -1.72
DMD-201ENST00000288447 SVIPQ8NHG7 77 aa4.33□□□□□ -1.72
DMD-201ENST00000288447 TMX1Q9H3N1 280 aa4.33□□□□□ -1.72
DMD-201ENST00000288447 GYS2P54840 703 aa4.33□□□□□ -1.72
DMD-201ENST00000288447 DDX46Q7L014 1031 aaKnown RBP4.33□□□□□ -1.72
DMD-201ENST00000288447 CDCA7Q9BWT1 371 aaPredicted RBP4.33□□□□□ -1.72
DMD-201ENST00000288447 COMMD10Q9Y6G5 202 aa4.33□□□□□ -1.72
DMD-201ENST00000288447 ANKRD62A6NC57 917 aa4.33□□□□□ -1.72
DMD-201ENST00000288447 PDAP1Q13442 181 aaKnown RBP4.33□□□□□ -1.72
DMD-201ENST00000288447 EVI5LQ96CN4 794 aa4.33□□□□□ -1.72
DMD-201ENST00000288447 SWAP70Q9UH65 585 aa4.33□□□□□ -1.72
DMD-201ENST00000288447 SF3B2Q13435 895 aaKnown RBP4.32□□□□□ -1.72
DMD-201ENST00000288447 ANP32BQ92688 251 aaKnown RBP4.32□□□□□ -1.72
DMD-201ENST00000288447 ABCF2Q9UG63 623 aa4.32□□□□□ -1.72
DMD-201ENST00000288447 ZC3H6P61129 1189 aaKnown RBP4.32□□□□□ -1.72
DMD-201ENST00000288447 MICAL1Q8TDZ2 1067 aa4.32□□□□□ -1.72
DMD-201ENST00000288447 FBXW7Q969H0 707 aa4.32□□□□□ -1.72
DMD-201ENST00000288447 RYDENQ9NUL5 291 aaKnown RBP4.32□□□□□ -1.72
DMD-201ENST00000288447 CHGAP10645 457 aaKnown RBP4.32□□□□□ -1.72
DMD-201ENST00000288447 VDRP11473 427 aa4.32□□□□□ -1.72
DMD-201ENST00000288447 PEX19P40855 299 aa4.32□□□□□ -1.72
DMD-201ENST00000288447 AMOTL1Q8IY63 956 aa4.32□□□□□ -1.72
DMD-201ENST00000288447 MAN1A1P33908 653 aa4.31□□□□□ -1.72
DMD-201ENST00000288447 DEKP35659 375 aaKnown RBP4.31□□□□□ -1.72
DMD-201ENST00000288447 RBM27Q9P2N5 1060 aaKnown RBP4.31□□□□□ -1.72
DMD-201ENST00000288447 DSG3P32926 999 aa4.31□□□□□ -1.72
DMD-201ENST00000288447 MCM6Q14566 821 aa4.31□□□□□ -1.72
DMD-201ENST00000288447 KCNB2Q92953 911 aa4.31□□□□□ -1.72
DMD-201ENST00000288447 ATP1B4Q9UN42 357 aaPredicted RBP4.31□□□□□ -1.72
DMD-201ENST00000288447 TLDC2A0PJX2 215 aa4.31□□□□□ -1.72
DMD-201ENST00000288447 FGAP02671 866 aa4.31□□□□□ -1.72
DMD-201ENST00000288447 TTC14Q96N46 770 aa4.31□□□□□ -1.72
DMD-201ENST00000288447 GOLIM4O00461 696 aa4.3□□□□□ -1.72
DMD-201ENST00000288447 RPGRIP1LQ68CZ1 1315 aa4.3□□□□□ -1.72
DMD-201ENST00000288447 CCDC180Q9P1Z9 1646 aa4.3□□□□□ -1.72
DMD-201ENST00000288447 SPDYE2BA6NHP3 402 aa4.3□□□□□ -1.72
DMD-201ENST00000288447 ATG7O95352 703 aa4.3□□□□□ -1.72
DMD-201ENST00000288447 SPDYE6P0CI01 402 aa4.3□□□□□ -1.72
DMD-201ENST00000288447 BDNFP23560 247 aa4.3□□□□□ -1.72
DMD-201ENST00000288447 SPDYE2Q495Y8 402 aa4.3□□□□□ -1.72
DMD-201ENST00000288447 NPAS4Q8IUM7 802 aa4.3□□□□□ -1.72
DMD-201ENST00000288447 SLC43A3Q8NBI5 491 aa4.3□□□□□ -1.72
DMD-201ENST00000288447 CXorf38Q8TB03 319 aa4.3□□□□□ -1.72
DMD-201ENST00000288447 GNL3LQ9NVN8 582 aaKnown RBP4.3□□□□□ -1.72
DMD-201ENST00000288447 PGAP2Q9UHJ9 254 aa4.3□□□□□ -1.72
DMD-201ENST00000288447 BICDL2A1A5D9 508 aa4.3□□□□□ -1.72
DMD-201ENST00000288447 CREB3O43889 395 aa4.3□□□□□ -1.72
DMD-201ENST00000288447 ANP32AP39687 249 aaKnown RBP4.3□□□□□ -1.72
DMD-201ENST00000288447 HDAC1Q13547 482 aaPredicted RBP4.3□□□□□ -1.72
DMD-201ENST00000288447 ZKSCAN8Q15776 578 aaPredicted RBP4.3□□□□□ -1.72
DMD-201ENST00000288447 CCDC102AQ96A19 550 aa4.3□□□□□ -1.72
DMD-201ENST00000288447 RAI14Q9P0K7 980 aa4.3□□□□□ -1.72
DMD-201ENST00000288447 TRIM66O15016 1216 aa4.29□□□□□ -1.72
DMD-201ENST00000288447 DCAF8Q5TAQ9 597 aa4.29□□□□□ -1.72
DMD-201ENST00000288447 RPAINQ86UA6 219 aa4.29□□□□□ -1.72
DMD-201ENST00000288447 U2SURPO15042 1029 aaKnown RBP4.29□□□□□ -1.72
DMD-201ENST00000288447 RRP9O43818 475 aaKnown RBP4.29□□□□□ -1.72
DMD-201ENST00000288447 HDLBPQ00341 1268 aaKnown RBP4.29□□□□□ -1.72
DMD-201ENST00000288447 TMEM94Q12767 1356 aa4.29□□□□□ -1.72
DMD-201ENST00000288447 RAB11FIP3O75154 756 aa4.29□□□□□ -1.72
DMD-201ENST00000288447 SSFA2P28290 1259 aa4.29□□□□□ -1.72
DMD-201ENST00000288447 RASSF7Q02833 373 aa4.29□□□□□ -1.72
DMD-201ENST00000288447 KRT77Q7Z794 578 aa4.29□□□□□ -1.72
DMD-201ENST00000288447 DDRGK1Q96HY6 314 aa4.28□□□□□ -1.72
DMD-201ENST00000288447 ZNF700Q9H0M5 742 aa4.28□□□□□ -1.72
DMD-201ENST00000288447 WDR70Q9NW82 654 aa4.28□□□□□ -1.72
DMD-201ENST00000288447 SLAIN2Q9P270 581 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms