RNA–Protein interactions for RNA: ENST00000286398.11

SMC2-201, Transcript of structural maintenance of chromosomes 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC2, Length 5,992 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC2-201ENST00000286398 FBXW7Q969H0 707 aa11.04□□□□□ -0.64
SMC2-201ENST00000286398 KIF27Q86VH2 1401 aa11.04□□□□□ -0.64
SMC2-201ENST00000286398 RAB3GAP2Q9H2M9 1393 aa11.04□□□□□ -0.64
SMC2-201ENST00000286398 WRNQ14191 1432 aaPredicted RBP eCLIP11.04□□□□□ -0.64
SMC2-201ENST00000286398 SMC3Q9UQE7 1217 aa11.03□□□□□ -0.64
SMC2-201ENST00000286398 TRIM29Q14134 588 aa11.03□□□□□ -0.64
SMC2-201ENST00000286398 SYNE3Q6ZMZ3 975 aa11.03□□□□□ -0.64
SMC2-201ENST00000286398 MYBBP1AQ9BQG0 1328 aaKnown RBP11.03□□□□□ -0.64
SMC2-201ENST00000286398 E9PSI1 815 aa11.03□□□□□ -0.64
SMC2-201ENST00000286398 ELL2O00472 640 aaPredicted RBP11.03□□□□□ -0.64
SMC2-201ENST00000286398 FHAD1B1AJZ9 1412 aa11.03□□□□□ -0.64
SMC2-201ENST00000286398 HDGFP51858 240 aaKnown RBP11.03□□□□□ -0.64
SMC2-201ENST00000286398 MPHOSPH9Q99550 1183 aa11.03□□□□□ -0.64
SMC2-201ENST00000286398 C22orf23Q9BZE7 217 aa11.03□□□□□ -0.64
SMC2-201ENST00000286398 CPLX1O14810 134 aa11.02□□□□□ -0.64
SMC2-201ENST00000286398 RRP9O43818 475 aaKnown RBP11.02□□□□□ -0.64
SMC2-201ENST00000286398 NAP1L1P55209 391 aaKnown RBP11.02□□□□□ -0.64
SMC2-201ENST00000286398 DYDC1Q8WWB3 177 aa11.02□□□□□ -0.64
SMC2-201ENST00000286398 L3MBTL2Q969R5 705 aa11.02□□□□□ -0.65
SMC2-201ENST00000286398 ANO2Q9NQ90 1003 aa11.02□□□□□ -0.65
SMC2-201ENST00000286398 PRKRIP1Q9H875 184 aaPredicted RBP11.01□□□□□ -0.65
SMC2-201ENST00000286398 TAF3Q5VWG9 929 aa11.01□□□□□ -0.65
SMC2-201ENST00000286398 KIF15Q9NS87 1388 aa11.01□□□□□ -0.65
SMC2-201ENST00000286398 FRAT2O75474 233 aaPredicted RBP11.01□□□□□ -0.65
SMC2-201ENST00000286398 NEFHP12036 1026 aa11.01□□□□□ -0.65
SMC2-201ENST00000286398 TRIM5Q9C035 493 aa11.01□□□□□ -0.65
SMC2-201ENST00000286398 BAZ1BQ9UIG0 1483 aaKnown RBP11□□□□□ -0.65
SMC2-201ENST00000286398 PAK3O75914 559 aaPredicted RBP11□□□□□ -0.65
SMC2-201ENST00000286398 CSB-PGBD3P0DP91 1061 aa11□□□□□ -0.65
SMC2-201ENST00000286398 AXDND1Q5T1B0 1012 aaPredicted RBP11□□□□□ -0.65
SMC2-201ENST00000286398 CCDC9Q9Y3X0 531 aaKnown RBP11□□□□□ -0.65
SMC2-201ENST00000286398 CCDC173Q0VFZ6 552 aa11□□□□□ -0.65
SMC2-201ENST00000286398 DEF6Q9H4E7 631 aa11□□□□□ -0.65
SMC2-201ENST00000286398 DDX19BQ9UMR2 479 aa11□□□□□ -0.65
SMC2-201ENST00000286398 CAVIN1Q6NZI2 390 aaKnown RBP11□□□□□ -0.65
SMC2-201ENST00000286398 RBM25P49756 843 aaKnown RBP11□□□□□ -0.65
SMC2-201ENST00000286398 CAGE1Q8TC20 777 aa11□□□□□ -0.65
SMC2-201ENST00000286398 TERF2IPQ9NYB0 399 aa11□□□□□ -0.65
SMC2-201ENST00000286398 PDILTQ8N807 584 aa10.99□□□□□ -0.65
SMC2-201ENST00000286398 MBD3O95983 291 aa10.99□□□□□ -0.65
SMC2-201ENST00000286398 NAT10Q9H0A0 1025 aaKnown RBP10.99□□□□□ -0.65
SMC2-201ENST00000286398 SDF4Q9BRK5 362 aa10.98□□□□□ -0.65
SMC2-201ENST00000286398 ERICH4A6NGS2 130 aa10.98□□□□□ -0.65
SMC2-201ENST00000286398 RNF20Q5VTR2 975 aa10.98□□□□□ -0.65
SMC2-201ENST00000286398 INTS3Q68E01 1043 aaKnown RBP10.98□□□□□ -0.65
SMC2-201ENST00000286398 CT47B1P0C2W7 299 aaPredicted RBP10.97□□□□□ -0.65
SMC2-201ENST00000286398 LRRFIP1Q32MZ4 808 aaKnown RBP10.97□□□□□ -0.65
SMC2-201ENST00000286398 KIAA0754O94854 1291 aa10.97□□□□□ -0.65
SMC2-201ENST00000286398 TTLL5Q6EMB2 1281 aa10.97□□□□□ -0.65
SMC2-201ENST00000286398 EIF3AQ14152 1382 aaKnown RBP10.97□□□□□ -0.65
SMC2-201ENST00000286398 ZNF526Q8TF50 670 aaPredicted RBP10.97□□□□□ -0.65
SMC2-201ENST00000286398 KANK4Q5T7N3 995 aaPredicted RBP10.97□□□□□ -0.65
SMC2-201ENST00000286398 GIMAP7Q8NHV1 300 aa10.97□□□□□ -0.65
SMC2-201ENST00000286398 TMX4Q9H1E5 349 aaPredicted RBP10.97□□□□□ -0.65
SMC2-201ENST00000286398 DZIP1LQ8IYY4 767 aaKnown RBP10.96□□□□□ -0.65
SMC2-201ENST00000286398 OFD1O75665 1012 aa10.96□□□□□ -0.65
SMC2-201ENST00000286398 USP8P40818 1118 aa10.96□□□□□ -0.65
SMC2-201ENST00000286398 LNPKQ9C0E8 428 aa10.96□□□□□ -0.65
SMC2-201ENST00000286398 CT47A1Q5JQC4 288 aaPredicted RBP10.96□□□□□ -0.65
SMC2-201ENST00000286398 GPATCH11Q8N954 259 aa10.96□□□□□ -0.65
SMC2-201ENST00000286398 NUP155O75694 1391 aa10.96□□□□□ -0.66
SMC2-201ENST00000286398 APAF1O14727 1248 aa10.96□□□□□ -0.66
SMC2-201ENST00000286398 TSPY26PQ9H489 355 aa10.96□□□□□ -0.66
SMC2-201ENST00000286398 OLFM4Q6UX06 510 aa10.96□□□□□ -0.66
SMC2-201ENST00000286398 UQCRHLA0A096LP55 91 aa10.95□□□□□ -0.66
SMC2-201ENST00000286398 UQCRHP07919 91 aa10.95□□□□□ -0.66
SMC2-201ENST00000286398 CCDC112Q8NEF3 446 aa10.95□□□□□ -0.66
SMC2-201ENST00000286398 ARHGAP35Q9NRY4 1499 aa10.95□□□□□ -0.66
SMC2-201ENST00000286398 LETM1O95202 739 aaPredicted RBP10.95□□□□□ -0.66
SMC2-201ENST00000286398 VPS8Q8N3P4 1428 aa10.95□□□□□ -0.66
SMC2-201ENST00000286398 ESPNB1AK53 854 aa10.95□□□□□ -0.66
SMC2-201ENST00000286398 CCP110O43303 1012 aa10.94□□□□□ -0.66
SMC2-201ENST00000286398 PANK3Q9H999 370 aa10.94□□□□□ -0.66
SMC2-201ENST00000286398 PRDM10Q9NQV6 1147 aa10.94□□□□□ -0.66
SMC2-201ENST00000286398 FOSBP53539 338 aa10.94□□□□□ -0.66
SMC2-201ENST00000286398 TRDNQ13061 729 aa10.94□□□□□ -0.66
SMC2-201ENST00000286398 GGT6Q6P531 493 aa10.94□□□□□ -0.66
SMC2-201ENST00000286398 CENPHQ9H3R5 247 aa10.94□□□□□ -0.66
SMC2-201ENST00000286398 PRPF40AO75400 957 aaKnown RBP10.93□□□□□ -0.66
SMC2-201ENST00000286398 IFIT2P09913 472 aaKnown RBP10.93□□□□□ -0.66
SMC2-201ENST00000286398 NEXNQ0ZGT2 675 aa10.93□□□□□ -0.66
SMC2-201ENST00000286398 SAFBQ15424 915 aaKnown RBP eCLIP10.93□□□□□ -0.66
SMC2-201ENST00000286398 MYO6Q9UM54 1294 aa10.93□□□□□ -0.66
SMC2-201ENST00000286398 SMC2O95347 1197 aa10.93□□□□□ -0.66
SMC2-201ENST00000286398 GOLGA6L7A0A1B0GV03 622 aa10.93□□□□□ -0.66
SMC2-201ENST00000286398 RSPH4AQ5TD94 716 aa10.93□□□□□ -0.66
SMC2-201ENST00000286398 SPC24Q8NBT2 197 aa10.93□□□□□ -0.66
SMC2-201ENST00000286398 ST20-MTHFSA0A0A6YYL1 179 aa10.93□□□□□ -0.66
SMC2-201ENST00000286398 IBSPP21815 317 aaPredicted RBP10.93□□□□□ -0.66
SMC2-201ENST00000286398 ZRSR2Q15696 482 aaKnown RBP10.93□□□□□ -0.66
SMC2-201ENST00000286398 ODF2Q5BJF6 829 aa10.93□□□□□ -0.66
SMC2-201ENST00000286398 FMNL2Q96PY5 1086 aa10.93□□□□□ -0.66
SMC2-201ENST00000286398 API5Q9BZZ5 524 aaKnown RBP10.93□□□□□ -0.66
SMC2-201ENST00000286398 G3V3G9 751 aa10.93□□□□□ -0.66
SMC2-201ENST00000286398 AMPHP49418 695 aa10.93□□□□□ -0.66
SMC2-201ENST00000286398 DCAF8Q5TAQ9 597 aa10.93□□□□□ -0.66
SMC2-201ENST00000286398 FMN1Q68DA7 1419 aa10.92□□□□□ -0.66
SMC2-201ENST00000286398 TNNT1P13805 278 aa10.92□□□□□ -0.66
SMC2-201ENST00000286398 GTF2E1P29083 439 aaPredicted RBP10.92□□□□□ -0.66
SMC2-201ENST00000286398 MLECQ14165 292 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms