RNA–Protein interactions for RNA: ENST00000275300.2

SLC22A3-201, Transcript of solute carrier family 22 member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC22A3, Length 3,348 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC22A3-201ENST00000275300 ARXQ96QS3 562 aa22.39■■□□□ 1.17
SLC22A3-201ENST00000275300 SLC12A5Q9H2X9 1139 aa22.39■■□□□ 1.17
SLC22A3-201ENST00000275300 ADCY10Q96PN6 1610 aa22.38■■□□□ 1.17
SLC22A3-201ENST00000275300 CDC42BPBQ9Y5S2 1711 aa22.37■■□□□ 1.17
SLC22A3-201ENST00000275300 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.36■■□□□ 1.17
SLC22A3-201ENST00000275300 IGHDP01880 384 aa22.35■■□□□ 1.17
SLC22A3-201ENST00000275300 SLFN5Q08AF3 891 aa22.34■■□□□ 1.17
SLC22A3-201ENST00000275300 SPRYD3Q8NCJ5 442 aa22.34■■□□□ 1.17
SLC22A3-201ENST00000275300 TRPM1Q7Z4N2 1603 aa22.32■■□□□ 1.16
SLC22A3-201ENST00000275300 SCAPERQ9BY12 1400 aa22.32■■□□□ 1.16
SLC22A3-201ENST00000275300 STK26Q9P289 416 aa22.32■■□□□ 1.16
SLC22A3-201ENST00000275300 GPRASP1Q5JY77 1395 aa22.32■■□□□ 1.16
SLC22A3-201ENST00000275300 MORC1Q86VD1 984 aa22.31■■□□□ 1.16
SLC22A3-201ENST00000275300 MS4A1P11836 297 aa22.31■■□□□ 1.16
SLC22A3-201ENST00000275300 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.3■■□□□ 1.16
SLC22A3-201ENST00000275300 CDCA8Q53HL2 280 aa22.29■■□□□ 1.16
SLC22A3-201ENST00000275300 WASHC2CQ9Y4E1 1318 aa22.28■■□□□ 1.16
SLC22A3-201ENST00000275300 CENPQQ7L2Z9 268 aaPredicted RBP22.28■■□□□ 1.16
SLC22A3-201ENST00000275300 WDR7Q9Y4E6 1490 aa22.28■■□□□ 1.16
SLC22A3-201ENST00000275300 SEC24BO95487 1268 aa22.28■■□□□ 1.16
SLC22A3-201ENST00000275300 BLMP54132 1417 aaPredicted RBP22.27■■□□□ 1.16
SLC22A3-201ENST00000275300 NFKBIBQ15653 356 aa22.27■■□□□ 1.16
SLC22A3-201ENST00000275300 SLKQ9H2G2 1235 aaPredicted RBP22.27■■□□□ 1.16
SLC22A3-201ENST00000275300 BRPF3Q9ULD4 1205 aa22.27■■□□□ 1.16
SLC22A3-201ENST00000275300 UGGT1Q9NYU2 1555 aa22.27■■□□□ 1.16
SLC22A3-201ENST00000275300 C8orf34Q49A92 452 aa22.26■■□□□ 1.15
SLC22A3-201ENST00000275300 ARHGEF5Q12774 1597 aa22.25■■□□□ 1.15
SLC22A3-201ENST00000275300 FAM161AQ3B820 660 aa22.25■■□□□ 1.15
SLC22A3-201ENST00000275300 KDM2BQ8NHM5 1336 aa22.25■■□□□ 1.15
SLC22A3-201ENST00000275300 FRAT2O75474 233 aaPredicted RBP22.24■■□□□ 1.15
SLC22A3-201ENST00000275300 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.24■■□□□ 1.15
SLC22A3-201ENST00000275300 U2SURPO15042 1029 aaKnown RBP22.22■■□□□ 1.15
SLC22A3-201ENST00000275300 MTHFSP49914 203 aa22.22■■□□□ 1.15
SLC22A3-201ENST00000275300 PREX2Q70Z35 1606 aa22.22■■□□□ 1.15
SLC22A3-201ENST00000275300 PRDM15P57071 1507 aaPredicted RBP22.21■■□□□ 1.15
SLC22A3-201ENST00000275300 WWC1Q8IX03 1113 aa22.21■■□□□ 1.15
SLC22A3-201ENST00000275300 CENPJQ9HC77 1338 aaPredicted RBP22.21■■□□□ 1.15
SLC22A3-201ENST00000275300 TCP11L2Q8N4U5 519 aa22.21■■□□□ 1.15
SLC22A3-201ENST00000275300 U2AF1L5P0DN76 240 aaPredicted RBP22.2■■□□□ 1.14
SLC22A3-201ENST00000275300 U2AF1Q01081 240 aaKnown RBP eCLIP22.2■■□□□ 1.14
SLC22A3-201ENST00000275300 CABP2Q9NPB3 220 aa22.2■■□□□ 1.14
SLC22A3-201ENST00000275300 PLCH2O75038 1416 aa22.2■■□□□ 1.14
SLC22A3-201ENST00000275300 ANO8Q9HCE9 1232 aaPredicted RBP22.2■■□□□ 1.14
SLC22A3-201ENST00000275300 E9PCH4 1651 aa22.2■■□□□ 1.14
SLC22A3-201ENST00000275300 PPM1GO15355 546 aaPredicted RBP22.19■■□□□ 1.14
SLC22A3-201ENST00000275300 FBLN1P23142 703 aa22.19■■□□□ 1.14
SLC22A3-201ENST00000275300 TSR2Q969E8 191 aaKnown RBP22.19■■□□□ 1.14
SLC22A3-201ENST00000275300 DDRGK1Q96HY6 314 aa22.19■■□□□ 1.14
SLC22A3-201ENST00000275300 CFAP65Q6ZU64 1925 aaKnown RBP22.19■■□□□ 1.14
SLC22A3-201ENST00000275300 ZNF521Q96K83 1311 aa22.19■■□□□ 1.14
SLC22A3-201ENST00000275300 RLBP1P12271 317 aa22.19■■□□□ 1.14
SLC22A3-201ENST00000275300 ZMYM4Q5VZL5 1548 aa22.18■■□□□ 1.14
SLC22A3-201ENST00000275300 KANK1Q14678 1352 aa22.17■■□□□ 1.14
SLC22A3-201ENST00000275300 E9PSI1 815 aa22.17■■□□□ 1.14
SLC22A3-201ENST00000275300 DUOX2Q9NRD8 1548 aa22.16■■□□□ 1.14
SLC22A3-201ENST00000275300 SCAF11Q99590 1463 aaKnown RBP22.16■■□□□ 1.14
SLC22A3-201ENST00000275300 ATP10AO60312 1499 aa22.15■■□□□ 1.14
SLC22A3-201ENST00000275300 GGNBP2Q9H3C7 697 aa22.13■■□□□ 1.13
SLC22A3-201ENST00000275300 MYO5CQ9NQX4 1742 aa22.12■■□□□ 1.13
SLC22A3-201ENST00000275300 PCDHB15Q9Y5E8 787 aa22.12■■□□□ 1.13
SLC22A3-201ENST00000275300 RAPGEF3O95398 923 aa22.11■■□□□ 1.13
SLC22A3-201ENST00000275300 NSD3Q9BZ95 1437 aa22.11■■□□□ 1.13
SLC22A3-201ENST00000275300 CHD1O14646 1710 aa22.11■■□□□ 1.13
SLC22A3-201ENST00000275300 EIF3AQ14152 1382 aaKnown RBP22.1■■□□□ 1.13
SLC22A3-201ENST00000275300 ASXL1Q8IXJ9 1541 aa22.1■■□□□ 1.13
SLC22A3-201ENST00000275300 MAST1Q9Y2H9 1570 aa22.1■■□□□ 1.13
SLC22A3-201ENST00000275300 SRPK2P78362 688 aaKnown RBP22.09■■□□□ 1.13
SLC22A3-201ENST00000275300 NOS1P29475 1434 aa22.09■■□□□ 1.13
SLC22A3-201ENST00000275300 GSE1Q14687 1217 aa22.08■■□□□ 1.13
SLC22A3-201ENST00000275300 ABCC2Q92887 1545 aa22.08■■□□□ 1.13
SLC22A3-201ENST00000275300 NKTRP30414 1462 aaKnown RBP22.06■■□□□ 1.12
SLC22A3-201ENST00000275300 MINK1Q8N4C8 1332 aaPredicted RBP22.06■■□□□ 1.12
SLC22A3-201ENST00000275300 UNC13BO14795 1591 aa22.06■■□□□ 1.12
SLC22A3-201ENST00000275300 RARSP54136 660 aaKnown RBP22.06■■□□□ 1.12
SLC22A3-201ENST00000275300 IQGAP3Q86VI3 1631 aa22.05■■□□□ 1.12
SLC22A3-201ENST00000275300 TRMT2AQ8IZ69 625 aaKnown RBP22.05■■□□□ 1.12
SLC22A3-201ENST00000275300 FTSJ3Q8IY81 847 aaKnown RBP22.04■■□□□ 1.12
SLC22A3-201ENST00000275300 ELL2O00472 640 aaPredicted RBP22.03■■□□□ 1.12
SLC22A3-201ENST00000275300 PDZRN3Q9UPQ7 1066 aa22.03■■□□□ 1.12
SLC22A3-201ENST00000275300 RUNDC1Q96C34 613 aa22.03■■□□□ 1.12
SLC22A3-201ENST00000275300 FANCAO15360 1455 aa22.03■■□□□ 1.12
SLC22A3-201ENST00000275300 GZF1Q9H116 711 aaPredicted RBP22.02■■□□□ 1.12
SLC22A3-201ENST00000275300 CLTCL1P53675 1640 aa22.02■■□□□ 1.12
SLC22A3-201ENST00000275300 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.01■■□□□ 1.114e-7■■■■□ 20.2
SLC22A3-201ENST00000275300 ERVK-7P63135 1459 aa22.01■■□□□ 1.11
SLC22A3-201ENST00000275300 NPM1P06748 294 aaKnown RBP eCLIP22■■□□□ 1.11
SLC22A3-201ENST00000275300 ITPRIPQ8IWB1 547 aa22■■□□□ 1.11
SLC22A3-201ENST00000275300 SMC4Q9NTJ3 1288 aa22■■□□□ 1.11
SLC22A3-201ENST00000275300 PRKCSHP14314 528 aaPredicted RBP22■■□□□ 1.11
SLC22A3-201ENST00000275300 MFAP1P55081 439 aaKnown RBP22■■□□□ 1.11
SLC22A3-201ENST00000275300 POGKQ9P215 609 aa22■■□□□ 1.11
SLC22A3-201ENST00000275300 EIF2AK4Q9P2K8 1649 aaKnown RBP21.99■■□□□ 1.11
SLC22A3-201ENST00000275300 EXOSC9Q06265 439 aaKnown RBP21.99■■□□□ 1.11
SLC22A3-201ENST00000275300 CFAP53Q96M91 514 aa21.99■■□□□ 1.11
SLC22A3-201ENST00000275300 MADDQ8WXG6 1647 aa21.98■■□□□ 1.11
SLC22A3-201ENST00000275300 ADGRL1O94910 1474 aa21.98■■□□□ 1.11
SLC22A3-201ENST00000275300 USP35Q9P2H5 1018 aa21.98■■□□□ 1.11
SLC22A3-201ENST00000275300 CGNL1Q0VF96 1302 aa21.97■■□□□ 1.11
SLC22A3-201ENST00000275300 PIK3C2GO75747 1445 aa21.97■■□□□ 1.11
SLC22A3-201ENST00000275300 THUMPD2Q9BTF0 503 aaKnown RBP21.97■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms