RNA–Protein interactions for RNA: ENST00000275233.11

SHPRH-201, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SHPRH, Length 6,649 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-201ENST00000275233 SYNE3Q6ZMZ3 975 aa14.62□□□□□ -0.07
SHPRH-201ENST00000275233 HMOX1P09601 288 aa14.62□□□□□ -0.07
SHPRH-201ENST00000275233 ANO2Q9NQ90 1003 aa14.61□□□□□ -0.07
SHPRH-201ENST00000275233 RIPK4P57078 832 aa14.61□□□□□ -0.07
SHPRH-201ENST00000275233 KIF3AQ9Y496 699 aa14.61□□□□□ -0.07
SHPRH-201ENST00000275233 CCAR2Q8N163 923 aaKnown RBP14.61□□□□□ -0.07
SHPRH-201ENST00000275233 PDE3BQ13370 1112 aa14.61□□□□□ -0.07
SHPRH-201ENST00000275233 AMOTL1Q8IY63 956 aa14.61□□□□□ -0.07
SHPRH-201ENST00000275233 AIMP1Q12904 312 aaKnown RBP14.6□□□□□ -0.07
SHPRH-201ENST00000275233 GOLGA6L1Q8N7Z2 621 aa14.6□□□□□ -0.07
SHPRH-201ENST00000275233 FYB1O15117 783 aa14.6□□□□□ -0.07
SHPRH-201ENST00000275233 DIAPH1O60610 1272 aaKnown RBP14.6□□□□□ -0.07
SHPRH-201ENST00000275233 UACAQ9BZF9 1416 aa14.6□□□□□ -0.07
SHPRH-201ENST00000275233 PHLDB1Q86UU1 1377 aa14.6□□□□□ -0.07
SHPRH-201ENST00000275233 IFIT2P09913 472 aaKnown RBP14.6□□□□□ -0.07
SHPRH-201ENST00000275233 PHF14O94880 888 aa14.6□□□□□ -0.07
SHPRH-201ENST00000275233 PTPRGP23470 1445 aa14.59□□□□□ -0.07
SHPRH-201ENST00000275233 FAM69CQ0P6D2 419 aa14.59□□□□□ -0.07
SHPRH-201ENST00000275233 TSHZ2Q9NRE2 1034 aa14.59□□□□□ -0.07
SHPRH-201ENST00000275233 PRDM2Q13029 1718 aa14.59□□□□□ -0.07
SHPRH-201ENST00000275233 CADPSQ9ULU8 1353 aa14.59□□□□□ -0.07
SHPRH-201ENST00000275233 KDM4AO75164 1064 aa14.59□□□□□ -0.07
SHPRH-201ENST00000275233 E9PSI1 815 aa14.58□□□□□ -0.08
SHPRH-201ENST00000275233 FKBP5Q13451 457 aaPredicted RBP14.58□□□□□ -0.08
SHPRH-201ENST00000275233 USP47Q96K76 1375 aa14.58□□□□□ -0.08
SHPRH-201ENST00000275233 PCMTD1Q96MG8 357 aaPredicted RBP14.58□□□□□ -0.08
SHPRH-201ENST00000275233 USP35Q9P2H5 1018 aa14.57□□□□□ -0.08
SHPRH-201ENST00000275233 FAM177BA6PVY3 158 aa14.57□□□□□ -0.08
SHPRH-201ENST00000275233 GOLGA6L19H0YKK7 550 aa14.57□□□□□ -0.08
SHPRH-201ENST00000275233 MTMR7Q9Y216 660 aa14.57□□□□□ -0.08
SHPRH-201ENST00000275233 DDX49Q9Y6V7 483 aaKnown RBP14.57□□□□□ -0.08
SHPRH-201ENST00000275233 NFXL1Q6ZNB6 911 aa14.56□□□□□ -0.08
SHPRH-201ENST00000275233 CENPQQ7L2Z9 268 aaPredicted RBP14.56□□□□□ -0.08
SHPRH-201ENST00000275233 TOP2AP11388 1531 aaKnown RBP14.56□□□□□ -0.08
SHPRH-201ENST00000275233 TRIM29Q14134 588 aa14.56□□□□□ -0.08
SHPRH-201ENST00000275233 TSR1Q2NL82 804 aaKnown RBP14.56□□□□□ -0.08
SHPRH-201ENST00000275233 TSPYL4Q9UJ04 414 aa14.56□□□□□ -0.08
SHPRH-201ENST00000275233 ATF3P18847 181 aa14.56□□□□□ -0.08
SHPRH-201ENST00000275233 RRP1P56182 461 aaKnown RBP14.56□□□□□ -0.08
SHPRH-201ENST00000275233 CWC22Q9HCG8 908 aaKnown RBP14.56□□□□□ -0.08
SHPRH-201ENST00000275233 ZNF428Q96B54 188 aa14.56□□□□□ -0.08
SHPRH-201ENST00000275233 BECN2A8MW95 431 aa14.55□□□□□ -0.08
SHPRH-201ENST00000275233 OSCARQ8IYS5 282 aa14.55□□□□□ -0.08
SHPRH-201ENST00000275233 CABP2Q9NPB3 220 aa14.55□□□□□ -0.08
SHPRH-201ENST00000275233 G3BP1Q13283 466 aaKnown RBP eCLIP14.54□□□□□ -0.08
SHPRH-201ENST00000275233 FAM161AQ3B820 660 aa14.54□□□□□ -0.08
SHPRH-201ENST00000275233 RUSC2Q8N2Y8 1516 aa14.54□□□□□ -0.08
SHPRH-201ENST00000275233 DDX58O95786 925 aaKnown RBP14.54□□□□□ -0.08
SHPRH-201ENST00000275233 TPM2P07951 284 aa14.54□□□□□ -0.08
SHPRH-201ENST00000275233 PDE4AP27815 886 aa14.54□□□□□ -0.08
SHPRH-201ENST00000275233 CCDC27Q2M243 656 aa14.54□□□□□ -0.08
SHPRH-201ENST00000275233 NEUROD6Q96NK8 337 aa14.54□□□□□ -0.08
SHPRH-201ENST00000275233 RBM33Q96EV2 1170 aaKnown RBP14.53□□□□□ -0.08
SHPRH-201ENST00000275233 NLRP2Q9NX02 1062 aa14.53□□□□□ -0.08
SHPRH-201ENST00000275233 CPLX1O14810 134 aa14.53□□□□□ -0.08
SHPRH-201ENST00000275233 RIC3Q7Z5B4 369 aa14.53□□□□□ -0.08
SHPRH-201ENST00000275233 ZNF592Q92610 1267 aa14.53□□□□□ -0.08
SHPRH-201ENST00000275233 GGNBP2Q9H3C7 697 aa14.53□□□□□ -0.08
SHPRH-201ENST00000275233 TMEM132EQ6IEE7 984 aa14.53□□□□□ -0.08
SHPRH-201ENST00000275233 DDX11L8A8MPP1 907 aa14.52□□□□□ -0.08
SHPRH-201ENST00000275233 RUFY2Q8WXA3 655 aa14.52□□□□□ -0.08
SHPRH-201ENST00000275233 CNKSR2Q8WXI2 1034 aa14.52□□□□□ -0.09
SHPRH-201ENST00000275233 RAPGEF4Q8WZA2 1011 aa14.52□□□□□ -0.09
SHPRH-201ENST00000275233 TNNT3P45378 269 aaPredicted RBP14.52□□□□□ -0.09
SHPRH-201ENST00000275233 LRRFIP1Q32MZ4 808 aaKnown RBP14.52□□□□□ -0.09
SHPRH-201ENST00000275233 FANCD2Q9BXW9 1451 aa14.51□□□□□ -0.09
SHPRH-201ENST00000275233 PRKRIP1Q9H875 184 aaPredicted RBP14.51□□□□□ -0.09
SHPRH-201ENST00000275233 ZNF644Q9H582 1327 aaPredicted RBP14.51□□□□□ -0.09
SHPRH-201ENST00000275233 ZKSCAN1P17029 563 aaPredicted RBP14.51□□□□□ -0.09
SHPRH-201ENST00000275233 TRDNQ13061 729 aa14.51□□□□□ -0.09
SHPRH-201ENST00000275233 CPLX2Q6PUV4 134 aaKnown RBP14.5□□□□□ -0.09
SHPRH-201ENST00000275233 DZIP1LQ8IYY4 767 aaKnown RBP14.5□□□□□ -0.09
SHPRH-201ENST00000275233 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.5□□□□□ -0.09
SHPRH-201ENST00000275233 BCL11BQ9C0K0 894 aaPredicted RBP14.5□□□□□ -0.09
SHPRH-201ENST00000275233 ERICH2A1L162 156 aa14.49□□□□□ -0.09
SHPRH-201ENST00000275233 DDX19BQ9UMR2 479 aa14.49□□□□□ -0.09
SHPRH-201ENST00000275233 VPS37CA5D8V6 355 aaPredicted RBP14.49□□□□□ -0.09
SHPRH-201ENST00000275233 WASHC4Q2M389 1173 aa14.49□□□□□ -0.09
SHPRH-201ENST00000275233 BICD2Q8TD16 824 aa14.49□□□□□ -0.09
SHPRH-201ENST00000275233 TPM1P09493 284 aa14.49□□□□□ -0.09
SHPRH-201ENST00000275233 DHX57Q6P158 1386 aaKnown RBP14.49□□□□□ -0.09
SHPRH-201ENST00000275233 PATL2C9JE40 543 aaKnown RBP14.48□□□□□ -0.09
SHPRH-201ENST00000275233 LNPKQ9C0E8 428 aa14.48□□□□□ -0.09
SHPRH-201ENST00000275233 ATP6V1DQ9Y5K8 247 aa14.48□□□□□ -0.09
SHPRH-201ENST00000275233 PPP1R1BQ9UD71 204 aaPredicted RBP14.47□□□□□ -0.09
SHPRH-201ENST00000275233 CCDC43Q96MW1 224 aaKnown RBP14.47□□□□□ -0.09
SHPRH-201ENST00000275233 RUNDC1Q96C34 613 aa14.46□□□□□ -0.09
SHPRH-201ENST00000275233 STRN4Q9NRL3 753 aa14.46□□□□□ -0.09
SHPRH-201ENST00000275233 REC8O95072 547 aa14.46□□□□□ -0.09
SHPRH-201ENST00000275233 API5Q9BZZ5 524 aaKnown RBP14.46□□□□□ -0.09
SHPRH-201ENST00000275233 NLRP6P59044 892 aa14.46□□□□□ -0.1
SHPRH-201ENST00000275233 KRI1Q8N9T8 703 aaKnown RBP14.45□□□□□ -0.1
SHPRH-201ENST00000275233 ESCO1Q5FWF5 840 aa14.45□□□□□ -0.1
SHPRH-201ENST00000275233 PANK1Q8TE04 598 aa14.45□□□□□ -0.1
SHPRH-201ENST00000275233 RBM42Q9BTD8 480 aaKnown RBP14.45□□□□□ -0.1
SHPRH-201ENST00000275233 RNF20Q5VTR2 975 aa14.44□□□□□ -0.1
SHPRH-201ENST00000275233 ABTB2Q8N961 1025 aa14.44□□□□□ -0.1
SHPRH-201ENST00000275233 IKQ13123 557 aaPredicted RBP14.44□□□□□ -0.1
SHPRH-201ENST00000275233 CCDC47Q96A33 483 aaKnown RBP14.44□□□□□ -0.1
SHPRH-201ENST00000275233 CHMP4CQ96CF2 233 aa14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms