RNA–Protein interactions for RNA: ENST00000268704.6

SPG7-201, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPG7, Length 3,076 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-201ENST00000268704 SPINK5Q9NQ38 1064 aaPredicted RBP22.32■■□□□ 1.16
SPG7-201ENST00000268704 ZNF521Q96K83 1311 aa22.32■■□□□ 1.16
SPG7-201ENST00000268704 RGS3P49796 1198 aa22.31■■□□□ 1.16
SPG7-201ENST00000268704 MADDQ8WXG6 1647 aa22.31■■□□□ 1.16
SPG7-201ENST00000268704 ATP10AO60312 1499 aa22.31■■□□□ 1.16
SPG7-201ENST00000268704 USP35Q9P2H5 1018 aa22.31■■□□□ 1.16
SPG7-201ENST00000268704 CENPQQ7L2Z9 268 aaPredicted RBP22.3■■□□□ 1.16
SPG7-201ENST00000268704 DDRGK1Q96HY6 314 aa22.3■■□□□ 1.16
SPG7-201ENST00000268704 IQGAP1P46940 1657 aa22.29■■□□□ 1.16
SPG7-201ENST00000268704 C8orf34Q49A92 452 aa22.28■■□□□ 1.16
SPG7-201ENST00000268704 ERCC6L2Q5T890 1561 aa22.27■■□□□ 1.16
SPG7-201ENST00000268704 SLFN5Q08AF3 891 aa22.26■■□□□ 1.15
SPG7-201ENST00000268704 APAF1O14727 1248 aa22.25■■□□□ 1.15
SPG7-201ENST00000268704 BCAR3O75815 825 aa22.25■■□□□ 1.15
SPG7-201ENST00000268704 NFKBIBQ15653 356 aa22.25■■□□□ 1.15
SPG7-201ENST00000268704 ASXL1Q8IXJ9 1541 aa22.24■■□□□ 1.15
SPG7-201ENST00000268704 FAM161AQ3B820 660 aa22.24■■□□□ 1.15
SPG7-201ENST00000268704 TRAPPC8Q9Y2L5 1435 aa22.24■■□□□ 1.15
SPG7-201ENST00000268704 MYOM1P52179 1685 aa22.24■■□□□ 1.15
SPG7-201ENST00000268704 SYNMO15061 1565 aa22.24■■□□□ 1.15
SPG7-201ENST00000268704 DMRT2Q9Y5R5 561 aa22.24■■□□□ 1.15
SPG7-201ENST00000268704 DNAJC5Q9H3Z4 198 aa22.22■■□□□ 1.15
SPG7-201ENST00000268704 SCAF11Q99590 1463 aaKnown RBP22.21■■□□□ 1.15
SPG7-201ENST00000268704 DAXXQ9UER7 740 aaPredicted RBP22.21■■□□□ 1.15
SPG7-201ENST00000268704 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.21■■□□□ 1.15
SPG7-201ENST00000268704 SHROOM2Q13796 1616 aa22.21■■□□□ 1.15
SPG7-201ENST00000268704 SPHKAPQ2M3C7 1700 aa22.2■■□□□ 1.14
SPG7-201ENST00000268704 EIF5BO60841 1220 aaKnown RBP22.2■■□□□ 1.14
SPG7-201ENST00000268704 CLTCL1P53675 1640 aa22.19■■□□□ 1.14
SPG7-201ENST00000268704 PIK3C2GO75747 1445 aa22.19■■□□□ 1.14
SPG7-201ENST00000268704 AFAP1Q8N556 730 aa22.19■■□□□ 1.14
SPG7-201ENST00000268704 ABCC2Q92887 1545 aa22.18■■□□□ 1.14
SPG7-201ENST00000268704 CDCA8Q53HL2 280 aa22.17■■□□□ 1.14
SPG7-201ENST00000268704 BRPF3Q9ULD4 1205 aa22.17■■□□□ 1.14
SPG7-201ENST00000268704 TRMT2AQ8IZ69 625 aaKnown RBP22.17■■□□□ 1.14
SPG7-201ENST00000268704 CEP152O94986 1710 aa22.16■■□□□ 1.14
SPG7-201ENST00000268704 PLCH2O75038 1416 aa22.16■■□□□ 1.14
SPG7-201ENST00000268704 TRPM2O94759 1503 aa22.16■■□□□ 1.14
SPG7-201ENST00000268704 EFCAB2Q5VUJ9 269 aa22.16■■□□□ 1.14
SPG7-201ENST00000268704 NKTRP30414 1462 aaKnown RBP22.16■■□□□ 1.14
SPG7-201ENST00000268704 GSE1Q14687 1217 aa22.15■■□□□ 1.14
SPG7-201ENST00000268704 ABCC1P33527 1531 aa22.15■■□□□ 1.14
SPG7-201ENST00000268704 IGHDP01880 384 aa22.15■■□□□ 1.14
SPG7-201ENST00000268704 CFAP70Q5T0N1 1121 aa22.14■■□□□ 1.13
SPG7-201ENST00000268704 SPAG9O60271 1321 aaKnown RBP22.14■■□□□ 1.13
SPG7-201ENST00000268704 FRAT1Q92837 279 aaPredicted RBP22.13■■□□□ 1.13
SPG7-201ENST00000268704 CARD14Q9BXL6 1004 aa22.13■■□□□ 1.13
SPG7-201ENST00000268704 KDM5AP29375 1690 aaKnown RBP22.12■■□□□ 1.13
SPG7-201ENST00000268704 SCAPERQ9BY12 1400 aa22.11■■□□□ 1.13
SPG7-201ENST00000268704 FRAT2O75474 233 aaPredicted RBP22.11■■□□□ 1.13
SPG7-201ENST00000268704 UGGT1Q9NYU2 1555 aa22.11■■□□□ 1.13
SPG7-201ENST00000268704 PANK1Q8TE04 598 aa22.1■■□□□ 1.13
SPG7-201ENST00000268704 EIF3AQ14152 1382 aaKnown RBP22.1■■□□□ 1.13
SPG7-201ENST00000268704 RIMBP3CA6NJZ7 1639 aa22.09■■□□□ 1.13
SPG7-201ENST00000268704 RIMBP3BA6NNM3 1639 aa22.09■■□□□ 1.13
SPG7-201ENST00000268704 ZCCHC11Q5TAX3 1644 aaKnown RBP22.09■■□□□ 1.13
SPG7-201ENST00000268704 RIMBP3Q9UFD9 1639 aa22.09■■□□□ 1.13
SPG7-201ENST00000268704 E9PSI1 815 aa22.08■■□□□ 1.13
SPG7-201ENST00000268704 NEUROD2Q15784 382 aa22.08■■□□□ 1.13
SPG7-201ENST00000268704 COG6Q9Y2V7 657 aa22.08■■□□□ 1.13
SPG7-201ENST00000268704 TNNT2P45379 298 aaPredicted RBP22.08■■□□□ 1.13
SPG7-201ENST00000268704 ERVK-7P63135 1459 aa22.08■■□□□ 1.12
SPG7-201ENST00000268704 PTPRTO14522 1441 aa22.08■■□□□ 1.12
SPG7-201ENST00000268704 NPC1L1Q9UHC9 1359 aa22.07■■□□□ 1.12
SPG7-201ENST00000268704 ADGRF5Q8IZF2 1346 aa22.07■■□□□ 1.12
SPG7-201ENST00000268704 ZFYVE16Q7Z3T8 1539 aa22.07■■□□□ 1.12
SPG7-201ENST00000268704 SEC24BO95487 1268 aa22.06■■□□□ 1.12
SPG7-201ENST00000268704 RRP7AQ9Y3A4 280 aaKnown RBP22.06■■□□□ 1.12
SPG7-201ENST00000268704 CYB5RLQ6IPT4 315 aa22.06■■□□□ 1.12
SPG7-201ENST00000268704 CANXP27824 592 aaKnown RBP22.05■■□□□ 1.12
SPG7-201ENST00000268704 KIF3BO15066 747 aa22.04■■□□□ 1.12
SPG7-201ENST00000268704 USP19O94966 1318 aa22.04■■□□□ 1.12
SPG7-201ENST00000268704 CENPJQ9HC77 1338 aaPredicted RBP22.04■■□□□ 1.12
SPG7-201ENST00000268704 WWC1Q8IX03 1113 aa22.03■■□□□ 1.12
SPG7-201ENST00000268704 ABCA6Q8N139 1617 aa22.03■■□□□ 1.12
SPG7-201ENST00000268704 TNNQ9UQP3 1299 aa22.02■■□□□ 1.12
SPG7-201ENST00000268704 TET3O43151 1660 aa22.01■■□□□ 1.11
SPG7-201ENST00000268704 CLUAP1Q96AJ1 413 aa22.01■■□□□ 1.11
SPG7-201ENST00000268704 VIRMAQ69YN4 1812 aaKnown RBP22■■□□□ 1.11
SPG7-201ENST00000268704 DEPDC5O75140 1603 aa22■■□□□ 1.11
SPG7-201ENST00000268704 BCL2L13Q9BXK5 485 aa22■■□□□ 1.11
SPG7-201ENST00000268704 CGNL1Q0VF96 1302 aa21.98■■□□□ 1.11
SPG7-201ENST00000268704 MAP3K4Q9Y6R4 1608 aa21.98■■□□□ 1.11
SPG7-201ENST00000268704 KIAA1210Q9ULL0 1709 aa21.97■■□□□ 1.11
SPG7-201ENST00000268704 STAC3Q96MF2 364 aa21.97■■□□□ 1.11
SPG7-201ENST00000268704 PDE3AQ14432 1141 aa21.96■■□□□ 1.11
SPG7-201ENST00000268704 KANK1Q14678 1352 aa21.96■■□□□ 1.11
SPG7-201ENST00000268704 RTEL1-TNFRSF6BF6WH68 1400 aa21.96■■□□□ 1.11
SPG7-201ENST00000268704 RLBP1P12271 317 aa21.95■■□□□ 1.11
SPG7-201ENST00000268704 SLKQ9H2G2 1235 aaPredicted RBP21.95■■□□□ 1.1
SPG7-201ENST00000268704 NSD3Q9BZ95 1437 aa21.94■■□□□ 1.1
SPG7-201ENST00000268704 MROH2AA6NES4 1674 aa21.94■■□□□ 1.1
SPG7-201ENST00000268704 SLC12A5Q9H2X9 1139 aa21.94■■□□□ 1.1
SPG7-201ENST00000268704 ATP7AQ04656 1500 aa21.94■■□□□ 1.1
SPG7-201ENST00000268704 CHGAP10645 457 aaKnown RBP21.93■■□□□ 1.1
SPG7-201ENST00000268704 TRAK1Q9UPV9 953 aa21.93■■□□□ 1.1
SPG7-201ENST00000268704 SHPRHQ149N8 1683 aa21.93■■□□□ 1.1
SPG7-201ENST00000268704 MORC1Q86VD1 984 aa21.93■■□□□ 1.1
SPG7-201ENST00000268704 PCDHB15Q9Y5E8 787 aa21.93■■□□□ 1.1
SPG7-201ENST00000268704 POLR3AO14802 1390 aaPredicted RBP21.92■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms