RNA–Protein interactions for RNA: ENST00000268383.6

CDR2-201, Transcript of cerebellar degeneration related protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDR2, Length 2,702 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-201ENST00000268383 SLC4A3P48751 1232 aa29.06■■■□□ 2.24
CDR2-201ENST00000268383 IQGAP1P46940 1657 aa29.06■■■□□ 2.24
CDR2-201ENST00000268383 NEFMP07197 916 aa29.05■■■□□ 2.24
CDR2-201ENST00000268383 ABCC1P33527 1531 aa29.05■■■□□ 2.24
CDR2-201ENST00000268383 ZNF521Q96K83 1311 aa29.04■■■□□ 2.24
CDR2-201ENST00000268383 APAF1O14727 1248 aa29.04■■■□□ 2.24
CDR2-201ENST00000268383 CFAP70Q5T0N1 1121 aa29.04■■■□□ 2.24
CDR2-201ENST00000268383 KDM2BQ8NHM5 1336 aa29.04■■■□□ 2.24
CDR2-201ENST00000268383 ZCCHC11Q5TAX3 1644 aaKnown RBP29.03■■■□□ 2.24
CDR2-201ENST00000268383 SCAF11Q99590 1463 aaKnown RBP29.03■■■□□ 2.24
CDR2-201ENST00000268383 CLTCL1P53675 1640 aa29.02■■■□□ 2.24
CDR2-201ENST00000268383 DMRT2Q9Y5R5 561 aa29■■■□□ 2.23
CDR2-201ENST00000268383 KIF3BO15066 747 aa29■■■□□ 2.23
CDR2-201ENST00000268383 SLFN5Q08AF3 891 aa28.99■■■□□ 2.23
CDR2-201ENST00000268383 ASXL1Q8IXJ9 1541 aa28.99■■■□□ 2.23
CDR2-201ENST00000268383 BCAR3O75815 825 aa28.99■■■□□ 2.23
CDR2-201ENST00000268383 RGS3P49796 1198 aa28.98■■■□□ 2.23
CDR2-201ENST00000268383 CDCA8Q53HL2 280 aa28.98■■■□□ 2.23
CDR2-201ENST00000268383 SPHKAPQ2M3C7 1700 aa28.97■■■□□ 2.23
CDR2-201ENST00000268383 TRPM2O94759 1503 aa28.97■■■□□ 2.23
CDR2-201ENST00000268383 UGGT1Q9NYU2 1555 aa28.96■■■□□ 2.23
CDR2-201ENST00000268383 ADGRF5Q8IZF2 1346 aa28.95■■■□□ 2.23
CDR2-201ENST00000268383 MYOM1P52179 1685 aa28.95■■■□□ 2.23
CDR2-201ENST00000268383 SYNMO15061 1565 aa28.95■■■□□ 2.22
CDR2-201ENST00000268383 CARD14Q9BXL6 1004 aa28.95■■■□□ 2.22
CDR2-201ENST00000268383 CEP152O94986 1710 aa28.94■■■□□ 2.22
CDR2-201ENST00000268383 CENPQQ7L2Z9 268 aaPredicted RBP28.93■■■□□ 2.22
CDR2-201ENST00000268383 ZFYVE16Q7Z3T8 1539 aa28.92■■■□□ 2.22
CDR2-201ENST00000268383 PTPRTO14522 1441 aa28.92■■■□□ 2.22
CDR2-201ENST00000268383 TNNT2P45379 298 aaPredicted RBP28.9■■■□□ 2.22
CDR2-201ENST00000268383 PIK3C2GO75747 1445 aa28.9■■■□□ 2.22
CDR2-201ENST00000268383 SCAPERQ9BY12 1400 aa28.9■■■□□ 2.22
CDR2-201ENST00000268383 C8orf34Q49A92 452 aa28.88■■■□□ 2.21
CDR2-201ENST00000268383 GOLGA6L2Q8N9W4 650 aaPredicted RBP28.87■■■□□ 2.21
CDR2-201ENST00000268383 TRMT2AQ8IZ69 625 aaKnown RBP28.86■■■□□ 2.21
CDR2-201ENST00000268383 EIF3AQ14152 1382 aaKnown RBP28.86■■■□□ 2.21
CDR2-201ENST00000268383 NEUROD2Q15784 382 aa28.85■■■□□ 2.21
CDR2-201ENST00000268383 CHGAP10645 457 aaKnown RBP28.85■■■□□ 2.21
CDR2-201ENST00000268383 ERVK-7P63135 1459 aa28.84■■■□□ 2.21
CDR2-201ENST00000268383 KANK1Q14678 1352 aa28.83■■■□□ 2.21
CDR2-201ENST00000268383 KDM5AP29375 1690 aaKnown RBP28.83■■■□□ 2.21
CDR2-201ENST00000268383 FAM161AQ3B820 660 aa28.82■■■□□ 2.2
CDR2-201ENST00000268383 DDRGK1Q96HY6 314 aa28.82■■■□□ 2.2
CDR2-201ENST00000268383 RTEL1-TNFRSF6BF6WH68 1400 aa28.82■■■□□ 2.2
CDR2-201ENST00000268383 RRP7AQ9Y3A4 280 aaKnown RBP28.82■■■□□ 2.2
CDR2-201ENST00000268383 IL27Q8NEV9 243 aa28.81■■■□□ 2.2
CDR2-201ENST00000268383 IGHDP01880 384 aa28.8■■■□□ 2.2
CDR2-201ENST00000268383 TET3O43151 1660 aa28.8■■■□□ 2.2
CDR2-201ENST00000268383 NKTRP30414 1462 aaKnown RBP28.8■■■□□ 2.2
CDR2-201ENST00000268383 PPM1GO15355 546 aaPredicted RBP28.8■■■□□ 2.2
CDR2-201ENST00000268383 TRAK1Q9UPV9 953 aa28.78■■■□□ 2.2
CDR2-201ENST00000268383 ATP7AQ04656 1500 aa28.78■■■□□ 2.2
CDR2-201ENST00000268383 DEPDC5O75140 1603 aa28.78■■■□□ 2.2
CDR2-201ENST00000268383 NPC1L1Q9UHC9 1359 aa28.78■■■□□ 2.2
CDR2-201ENST00000268383 PANK1Q8TE04 598 aa28.78■■■□□ 2.2
CDR2-201ENST00000268383 ABCA6Q8N139 1617 aa28.77■■■□□ 2.2
CDR2-201ENST00000268383 CFAP65Q6ZU64 1925 aaKnown RBP28.77■■■□□ 2.2
CDR2-201ENST00000268383 FANCAO15360 1455 aa28.77■■■□□ 2.2
CDR2-201ENST00000268383 CLASP1Q7Z460 1538 aa28.77■■■□□ 2.2
CDR2-201ENST00000268383 STAC3Q96MF2 364 aa28.77■■■□□ 2.2
CDR2-201ENST00000268383 E9PSI1 815 aa28.76■■■□□ 2.19
CDR2-201ENST00000268383 RTN4Q9NQC3 1192 aaKnown RBP28.76■■■□□ 2.19
CDR2-201ENST00000268383 UHRF1BP1LA0JNW5 1464 aa28.75■■■□□ 2.19
CDR2-201ENST00000268383 COG6Q9Y2V7 657 aa28.75■■■□□ 2.19
CDR2-201ENST00000268383 SLC12A5Q9H2X9 1139 aa28.74■■■□□ 2.19
CDR2-201ENST00000268383 SENP3Q9H4L4 574 aaPredicted RBP28.74■■■□□ 2.19
CDR2-201ENST00000268383 DAXXQ9UER7 740 aaPredicted RBP28.74■■■□□ 2.19
CDR2-201ENST00000268383 NFKBIBQ15653 356 aa28.73■■■□□ 2.19
CDR2-201ENST00000268383 TMEM132EQ6IEE7 984 aa28.73■■■□□ 2.19
CDR2-201ENST00000268383 USP35Q9P2H5 1018 aa28.73■■■□□ 2.19
CDR2-201ENST00000268383 MAP3K4Q9Y6R4 1608 aa28.73■■■□□ 2.19
CDR2-201ENST00000268383 FRAT1Q92837 279 aaPredicted RBP28.73■■■□□ 2.19
CDR2-201ENST00000268383 WWC1Q8IX03 1113 aa28.72■■■□□ 2.19
CDR2-201ENST00000268383 CANXP27824 592 aaKnown RBP28.71■■■□□ 2.19
CDR2-201ENST00000268383 TNNQ9UQP3 1299 aa28.7■■■□□ 2.19
CDR2-201ENST00000268383 NUTM2DQ5VT03 806 aaPredicted RBP28.7■■■□□ 2.18
CDR2-201ENST00000268383 ADGRL1O94910 1474 aa28.7■■■□□ 2.18
CDR2-201ENST00000268383 VWDEQ8N2E2 1590 aa28.7■■■□□ 2.18
CDR2-201ENST00000268383 MORC1Q86VD1 984 aa28.69■■■□□ 2.18
CDR2-201ENST00000268383 BCL2L13Q9BXK5 485 aa28.69■■■□□ 2.18
CDR2-201ENST00000268383 NOS1P29475 1434 aa28.69■■■□□ 2.18
CDR2-201ENST00000268383 MROH2AA6NES4 1674 aa28.68■■■□□ 2.18
CDR2-201ENST00000268383 INO80Q9ULG1 1556 aaPredicted RBP28.68■■■□□ 2.18
CDR2-201ENST00000268383 CENPJQ9HC77 1338 aaPredicted RBP28.68■■■□□ 2.18
CDR2-201ENST00000268383 MROH1Q8NDA8 1641 aa28.68■■■□□ 2.18
CDR2-201ENST00000268383 NSD3Q9BZ95 1437 aa28.67■■■□□ 2.18
CDR2-201ENST00000268383 KIAA1210Q9ULL0 1709 aa28.67■■■□□ 2.18
CDR2-201ENST00000268383 KIF1BO60333 1816 aa28.65■■■□□ 2.18
CDR2-201ENST00000268383 SEC24BO95487 1268 aa28.64■■■□□ 2.18
CDR2-201ENST00000268383 MYOM2P54296 1465 aa28.63■■■□□ 2.17
CDR2-201ENST00000268383 GGT6Q6P531 493 aa28.63■■■□□ 2.17
CDR2-201ENST00000268383 TCP11L2Q8N4U5 519 aa28.62■■■□□ 2.17
CDR2-201ENST00000268383 CLUAP1Q96AJ1 413 aa28.61■■■□□ 2.17
CDR2-201ENST00000268383 ABCA9Q8IUA7 1624 aa28.6■■■□□ 2.17
CDR2-201ENST00000268383 ARAP3Q8WWN8 1544 aa28.6■■■□□ 2.17
CDR2-201ENST00000268383 POLR3AO14802 1390 aaPredicted RBP28.6■■■□□ 2.17
CDR2-201ENST00000268383 PPRC1Q5VV67 1664 aaKnown RBP28.6■■■□□ 2.17
CDR2-201ENST00000268383 RLBP1P12271 317 aa28.59■■■□□ 2.17
CDR2-201ENST00000268383 MTHFSP49914 203 aa28.59■■■□□ 2.17
CDR2-201ENST00000268383 FRAT2O75474 233 aaPredicted RBP28.58■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms