RNA–Protein interactions for RNA: ENST00000265896.9

SQLE-201, Transcript of squalene epoxidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SQLE, Length 2,961 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-201ENST00000265896 IGHDP01880 384 aa21.89■■□□□ 1.1
SQLE-201ENST00000265896 TRAPPC8Q9Y2L5 1435 aa21.89■■□□□ 1.09
SQLE-201ENST00000265896 KDM2BQ8NHM5 1336 aa21.89■■□□□ 1.09
SQLE-201ENST00000265896 ERCC6L2Q5T890 1561 aa21.88■■□□□ 1.09
SQLE-201ENST00000265896 C8orf34Q49A92 452 aa21.88■■□□□ 1.09
SQLE-201ENST00000265896 SLFN5Q08AF3 891 aa21.88■■□□□ 1.09
SQLE-201ENST00000265896 SPAG9O60271 1321 aaKnown RBP21.88■■□□□ 1.09
SQLE-201ENST00000265896 CLUAP1Q96AJ1 413 aa21.87■■□□□ 1.09
SQLE-201ENST00000265896 EFCAB2Q5VUJ9 269 aa21.87■■□□□ 1.09
SQLE-201ENST00000265896 CARD14Q9BXL6 1004 aa21.87■■□□□ 1.09
SQLE-201ENST00000265896 ARXQ96QS3 562 aa21.87■■□□□ 1.09
SQLE-201ENST00000265896 WDR7Q9Y4E6 1490 aa21.86■■□□□ 1.09
SQLE-201ENST00000265896 CENPQQ7L2Z9 268 aaPredicted RBP21.86■■□□□ 1.09
SQLE-201ENST00000265896 WASHC2CQ9Y4E1 1318 aa21.85■■□□□ 1.09
SQLE-201ENST00000265896 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.85■■□□□ 1.097e-7■■□□□ 13.4
SQLE-201ENST00000265896 ADGRF5Q8IZF2 1346 aa21.85■■□□□ 1.09
SQLE-201ENST00000265896 FRAT2O75474 233 aaPredicted RBP21.85■■□□□ 1.09
SQLE-201ENST00000265896 TRAK1Q9UPV9 953 aa21.85■■□□□ 1.09
SQLE-201ENST00000265896 SEC24BO95487 1268 aa21.84■■□□□ 1.09
SQLE-201ENST00000265896 SAFB2Q14151 953 aaKnown RBP eCLIP21.84■■□□□ 1.09
SQLE-201ENST00000265896 ARHGEF5Q12774 1597 aa21.84■■□□□ 1.09
SQLE-201ENST00000265896 FAM161AQ3B820 660 aa21.84■■□□□ 1.09
SQLE-201ENST00000265896 PRDM15P57071 1507 aaPredicted RBP21.84■■□□□ 1.09
SQLE-201ENST00000265896 TMEM132EQ6IEE7 984 aa21.83■■□□□ 1.09
SQLE-201ENST00000265896 PPM1GO15355 546 aaPredicted RBP21.83■■□□□ 1.08
SQLE-201ENST00000265896 ZMYM4Q5VZL5 1548 aa21.82■■□□□ 1.08
SQLE-201ENST00000265896 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.81■■□□□ 1.08
SQLE-201ENST00000265896 SPRYD3Q8NCJ5 442 aa21.81■■□□□ 1.08
SQLE-201ENST00000265896 DDRGK1Q96HY6 314 aa21.81■■□□□ 1.08
SQLE-201ENST00000265896 ZNF521Q96K83 1311 aa21.8■■□□□ 1.08
SQLE-201ENST00000265896 SLKQ9H2G2 1235 aaPredicted RBP21.8■■□□□ 1.08
SQLE-201ENST00000265896 SLC12A5Q9H2X9 1139 aa21.8■■□□□ 1.08
SQLE-201ENST00000265896 PREX2Q70Z35 1606 aa21.78■■□□□ 1.08
SQLE-201ENST00000265896 MYO5CQ9NQX4 1742 aa21.77■■□□□ 1.07
SQLE-201ENST00000265896 UGGT1Q9NYU2 1555 aa21.75■■□□□ 1.07
SQLE-201ENST00000265896 CDCA8Q53HL2 280 aa21.75■■□□□ 1.07
SQLE-201ENST00000265896 GSE1Q14687 1217 aa21.75■■□□□ 1.07
SQLE-201ENST00000265896 MORC1Q86VD1 984 aa21.73■■□□□ 1.07
SQLE-201ENST00000265896 RLBP1P12271 317 aa21.72■■□□□ 1.07
SQLE-201ENST00000265896 WWC1Q8IX03 1113 aa21.72■■□□□ 1.07
SQLE-201ENST00000265896 CENPJQ9HC77 1338 aaPredicted RBP21.72■■□□□ 1.07
SQLE-201ENST00000265896 GGT6Q6P531 493 aa21.72■■□□□ 1.07
SQLE-201ENST00000265896 SCAPERQ9BY12 1400 aa21.7■■□□□ 1.06
SQLE-201ENST00000265896 E9PSI1 815 aa21.69■■□□□ 1.06
SQLE-201ENST00000265896 USP35Q9P2H5 1018 aa21.69■■□□□ 1.06
SQLE-201ENST00000265896 SCAF11Q99590 1463 aaKnown RBP21.69■■□□□ 1.06
SQLE-201ENST00000265896 DUOX2Q9NRD8 1548 aa21.68■■□□□ 1.06
SQLE-201ENST00000265896 TCP11L2Q8N4U5 519 aa21.68■■□□□ 1.06
SQLE-201ENST00000265896 UNC13BO14795 1591 aa21.68■■□□□ 1.06
SQLE-201ENST00000265896 ATP10AO60312 1499 aa21.68■■□□□ 1.06
SQLE-201ENST00000265896 ASXL1Q8IXJ9 1541 aa21.67■■□□□ 1.06
SQLE-201ENST00000265896 PCDHB15Q9Y5E8 787 aa21.66■■□□□ 1.06
SQLE-201ENST00000265896 PLCH2O75038 1416 aa21.66■■□□□ 1.06
SQLE-201ENST00000265896 MTHFSP49914 203 aa21.66■■□□□ 1.06
SQLE-201ENST00000265896 MAST1Q9Y2H9 1570 aa21.66■■□□□ 1.06
SQLE-201ENST00000265896 IQGAP3Q86VI3 1631 aa21.66■■□□□ 1.06
SQLE-201ENST00000265896 NKTRP30414 1462 aaKnown RBP21.65■■□□□ 1.06
SQLE-201ENST00000265896 TRMT2AQ8IZ69 625 aaKnown RBP21.65■■□□□ 1.06
SQLE-201ENST00000265896 TSR2Q969E8 191 aaKnown RBP21.65■■□□□ 1.06
SQLE-201ENST00000265896 STK26Q9P289 416 aa21.63■■□□□ 1.05
SQLE-201ENST00000265896 U2AF1L5P0DN76 240 aaPredicted RBP21.62■■□□□ 1.05
SQLE-201ENST00000265896 U2AF1Q01081 240 aaKnown RBP eCLIP21.62■■□□□ 1.05
SQLE-201ENST00000265896 POGKQ9P215 609 aa21.62■■□□□ 1.05
SQLE-201ENST00000265896 EIF2AK4Q9P2K8 1649 aaKnown RBP21.62■■□□□ 1.05
SQLE-201ENST00000265896 USP19O94966 1318 aa21.61■■□□□ 1.05
SQLE-201ENST00000265896 U2SURPO15042 1029 aaKnown RBP21.6■■□□□ 1.05
SQLE-201ENST00000265896 NSD3Q9BZ95 1437 aa21.6■■□□□ 1.05
SQLE-201ENST00000265896 MADDQ8WXG6 1647 aa21.6■■□□□ 1.05
SQLE-201ENST00000265896 CFAP65Q6ZU64 1925 aaKnown RBP21.6■■□□□ 1.05
SQLE-201ENST00000265896 CABP2Q9NPB3 220 aa21.6■■□□□ 1.05
SQLE-201ENST00000265896 EIF3AQ14152 1382 aaKnown RBP21.59■■□□□ 1.05
SQLE-201ENST00000265896 RARSP54136 660 aaKnown RBP21.59■■□□□ 1.05
SQLE-201ENST00000265896 CLTCL1P53675 1640 aa21.58■■□□□ 1.04
SQLE-201ENST00000265896 KANK1Q14678 1352 aa21.58■■□□□ 1.04
SQLE-201ENST00000265896 PIK3C2GO75747 1445 aa21.57■■□□□ 1.04
SQLE-201ENST00000265896 CHD1O14646 1710 aa21.57■■□□□ 1.04
SQLE-201ENST00000265896 ERVK-7P63135 1459 aa21.57■■□□□ 1.04
SQLE-201ENST00000265896 FBLN1P23142 703 aa21.57■■□□□ 1.04
SQLE-201ENST00000265896 PDZRN3Q9UPQ7 1066 aa21.57■■□□□ 1.04
SQLE-201ENST00000265896 ABCC2Q92887 1545 aa21.56■■□□□ 1.04
SQLE-201ENST00000265896 EIF5BO60841 1220 aaKnown RBP21.56■■□□□ 1.04
SQLE-201ENST00000265896 GZF1Q9H116 711 aaPredicted RBP21.56■■□□□ 1.04
SQLE-201ENST00000265896 NOS1P29475 1434 aa21.55■■□□□ 1.04
SQLE-201ENST00000265896 CGNL1Q0VF96 1302 aa21.54■■□□□ 1.04
SQLE-201ENST00000265896 GGNBP2Q9H3C7 697 aa21.54■■□□□ 1.04
SQLE-201ENST00000265896 PLXNC1O60486 1568 aa21.53■■□□□ 1.04
SQLE-201ENST00000265896 RUNDC1Q96C34 613 aa21.53■■□□□ 1.04
SQLE-201ENST00000265896 INSRP06213 1382 aa21.52■■□□□ 1.03
SQLE-201ENST00000265896 FTSJ3Q8IY81 847 aaKnown RBP21.51■■□□□ 1.03
SQLE-201ENST00000265896 RNF17Q9BXT8 1623 aaKnown RBP21.51■■□□□ 1.03
SQLE-201ENST00000265896 MFAP1P55081 439 aaKnown RBP21.51■■□□□ 1.03
SQLE-201ENST00000265896 PDE3AQ14432 1141 aa21.51■■□□□ 1.03
SQLE-201ENST00000265896 LAMC1P11047 1609 aa21.5■■□□□ 1.03
SQLE-201ENST00000265896 ABCC1P33527 1531 aa21.5■■□□□ 1.03
SQLE-201ENST00000265896 SYNMO15061 1565 aa21.49■■□□□ 1.03
SQLE-201ENST00000265896 IQGAP1P46940 1657 aa21.48■■□□□ 1.03
SQLE-201ENST00000265896 ITPRIPQ8IWB1 547 aa21.47■■□□□ 1.03
SQLE-201ENST00000265896 SMC4Q9NTJ3 1288 aa21.47■■□□□ 1.03
SQLE-201ENST00000265896 TRPM2O94759 1503 aa21.47■■□□□ 1.03
SQLE-201ENST00000265896 EXOSC9Q06265 439 aaKnown RBP21.47■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms