RNA–Protein interactions for RNA: ENST00000264389.6

COPS4-201, Transcript of COP9 signalosome subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPS4, Length 1,744 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4-201ENST00000264389 ERVK-7P63135 1459 aa11.72□□□□□ -0.53
COPS4-201ENST00000264389 HSPA5P11021 654 aaKnown RBP11.72□□□□□ -0.53
COPS4-201ENST00000264389 IQGAP1P46940 1657 aa11.71□□□□□ -0.53
COPS4-201ENST00000264389 SPATA31D1Q6ZQQ2 1576 aa11.71□□□□□ -0.53
COPS4-201ENST00000264389 ROCK2O75116 1388 aaKnown RBP11.71□□□□□ -0.54
COPS4-201ENST00000264389 USP47Q96K76 1375 aa11.71□□□□□ -0.54
COPS4-201ENST00000264389 MLECQ14165 292 aa11.69□□□□□ -0.54
COPS4-201ENST00000264389 TMEM131LA2VDJ0 1609 aa11.69□□□□□ -0.54
COPS4-201ENST00000264389 NEXMIFQ5QGS0 1516 aa11.68□□□□□ -0.54
COPS4-201ENST00000264389 ARID4BQ4LE39 1312 aaPredicted RBP11.68□□□□□ -0.54
COPS4-201ENST00000264389 GPRASP1Q5JY77 1395 aa11.67□□□□□ -0.54
COPS4-201ENST00000264389 STAC3Q96MF2 364 aa11.67□□□□□ -0.54
COPS4-201ENST00000264389 CARD11Q9BXL7 1154 aa11.67□□□□□ -0.54
COPS4-201ENST00000264389 CHGAP10645 457 aaKnown RBP11.66□□□□□ -0.54
COPS4-201ENST00000264389 ESF1Q9H501 851 aaKnown RBP11.66□□□□□ -0.54
COPS4-201ENST00000264389 C3P01024 1663 aa11.66□□□□□ -0.54
COPS4-201ENST00000264389 NRXN1Q9ULB1 1477 aa11.66□□□□□ -0.54
COPS4-201ENST00000264389 KDM5AP29375 1690 aaKnown RBP11.65□□□□□ -0.55
COPS4-201ENST00000264389 SETBP1Q9Y6X0 1596 aa11.64□□□□□ -0.55
COPS4-201ENST00000264389 SLC52A1Q9NWF4 448 aa11.63□□□□□ -0.55
COPS4-201ENST00000264389 DDX10Q13206 875 aaKnown RBP11.63□□□□□ -0.55
COPS4-201ENST00000264389 RPGRIP1LQ68CZ1 1315 aa11.62□□□□□ -0.55
COPS4-201ENST00000264389 HOXD11P31277 338 aaPredicted RBP11.62□□□□□ -0.55
COPS4-201ENST00000264389 RIMS1Q86UR5 1692 aaKnown RBP11.62□□□□□ -0.55
COPS4-201ENST00000264389 CCDC7Q96M83 1385 aa11.62□□□□□ -0.55
COPS4-201ENST00000264389 UBR1Q8IWV7 1749 aa11.61□□□□□ -0.55
COPS4-201ENST00000264389 WASHC2AQ641Q2 1341 aa11.61□□□□□ -0.55
COPS4-201ENST00000264389 PIK3C2GO75747 1445 aa11.61□□□□□ -0.55
COPS4-201ENST00000264389 NBPF1Q3BBV0 1214 aa11.61□□□□□ -0.55
COPS4-201ENST00000264389 ZMYM3Q14202 1370 aa11.61□□□□□ -0.55
COPS4-201ENST00000264389 MYO3AQ8NEV4 1616 aa11.61□□□□□ -0.55
COPS4-201ENST00000264389 IDI1Q13907 227 aa11.6□□□□□ -0.55
COPS4-201ENST00000264389 FBXO31Q5XUX0 539 aaPredicted RBP11.6□□□□□ -0.55
COPS4-201ENST00000264389 SCAF11Q99590 1463 aaKnown RBP11.6□□□□□ -0.55
COPS4-201ENST00000264389 ADGRF5Q8IZF2 1346 aa11.6□□□□□ -0.55
COPS4-201ENST00000264389 MIER1Q8N108 512 aa11.6□□□□□ -0.55
COPS4-201ENST00000264389 ARHGEF28Q8N1W1 1705 aaKnown RBP11.59□□□□□ -0.55
COPS4-201ENST00000264389 QRICH2Q9H0J4 1663 aa11.58□□□□□ -0.55
COPS4-201ENST00000264389 EIF3AQ14152 1382 aaKnown RBP11.58□□□□□ -0.56
COPS4-201ENST00000264389 KIF7Q2M1P5 1343 aa11.58□□□□□ -0.56
COPS4-201ENST00000264389 A2ML1A8K2U0 1454 aa11.58□□□□□ -0.56
COPS4-201ENST00000264389 TNRQ92752 1358 aa11.58□□□□□ -0.56
COPS4-201ENST00000264389 ST20-MTHFSA0A0A6YYL1 179 aa11.57□□□□□ -0.56
COPS4-201ENST00000264389 ADGRB1O14514 1584 aa11.57□□□□□ -0.56
COPS4-201ENST00000264389 ADAMTSL3P82987 1691 aa11.57□□□□□ -0.56
COPS4-201ENST00000264389 STAG3Q9UJ98 1225 aa11.57□□□□□ -0.56
COPS4-201ENST00000264389 ZFYVE9O95405 1425 aa11.57□□□□□ -0.56
COPS4-201ENST00000264389 C11orf95C9JLR9 678 aaPredicted RBP11.56□□□□□ -0.56
COPS4-201ENST00000264389 SETD1AO15047 1707 aaKnown RBP11.56□□□□□ -0.56
COPS4-201ENST00000264389 NLRP1Q9C000 1473 aa11.55□□□□□ -0.56
COPS4-201ENST00000264389 VGFO15240 615 aaPredicted RBP11.55□□□□□ -0.56
COPS4-201ENST00000264389 CFAP70Q5T0N1 1121 aa11.55□□□□□ -0.56
COPS4-201ENST00000264389 ASXL1Q8IXJ9 1541 aa11.54□□□□□ -0.56
COPS4-201ENST00000264389 RIMS2Q9UQ26 1411 aa11.53□□□□□ -0.56
COPS4-201ENST00000264389 POLR3GLQ9BT43 218 aa11.53□□□□□ -0.56
COPS4-201ENST00000264389 NRXN3Q9Y4C0 1643 aa11.53□□□□□ -0.56
COPS4-201ENST00000264389 MYOM1P52179 1685 aa11.53□□□□□ -0.56
COPS4-201ENST00000264389 ALKQ9UM73 1620 aa11.52□□□□□ -0.56
COPS4-201ENST00000264389 ANP32CO43423 234 aa11.52□□□□□ -0.56
COPS4-201ENST00000264389 NUTM2DQ5VT03 806 aaPredicted RBP11.52□□□□□ -0.56
COPS4-201ENST00000264389 ZNF142P52746 1687 aaPredicted RBP11.52□□□□□ -0.56
COPS4-201ENST00000264389 C14orf93Q9H972 538 aaKnown RBP11.51□□□□□ -0.57
COPS4-201ENST00000264389 DISP3Q9P2K9 1392 aa11.51□□□□□ -0.57
COPS4-201ENST00000264389 TESK2Q96S53 571 aa11.5□□□□□ -0.57
COPS4-201ENST00000264389 KNDC1Q76NI1 1749 aa11.5□□□□□ -0.57
COPS4-201ENST00000264389 CEP170BQ9Y4F5 1589 aaPredicted RBP11.49□□□□□ -0.57
COPS4-201ENST00000264389 TMF1P82094 1093 aa11.49□□□□□ -0.57
COPS4-201ENST00000264389 CEBPAP49715 358 aaPredicted RBP11.48□□□□□ -0.57
COPS4-201ENST00000264389 SBNO2Q9Y2G9 1366 aa11.47□□□□□ -0.57
COPS4-201ENST00000264389 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.46□□□□□ -0.57
COPS4-201ENST00000264389 SLIT1O75093 1534 aa11.46□□□□□ -0.57
COPS4-201ENST00000264389 PTPRMP28827 1452 aa11.46□□□□□ -0.57
COPS4-201ENST00000264389 TMEM2Q9UHN6 1383 aa11.46□□□□□ -0.57
COPS4-201ENST00000264389 CENPJQ9HC77 1338 aaPredicted RBP11.46□□□□□ -0.58
COPS4-201ENST00000264389 ZBTB22O15209 634 aa11.46□□□□□ -0.58
COPS4-201ENST00000264389 TMEM132EQ6IEE7 984 aa11.46□□□□□ -0.58
COPS4-201ENST00000264389 SETD1BQ9UPS6 1966 aaKnown RBP11.45□□□□□ -0.58
COPS4-201ENST00000264389 CDCA8Q53HL2 280 aa11.45□□□□□ -0.58
COPS4-201ENST00000264389 TRAK1Q9UPV9 953 aa11.45□□□□□ -0.58
COPS4-201ENST00000264389 YTHDC2Q9H6S0 1430 aaKnown RBP11.45□□□□□ -0.58
COPS4-201ENST00000264389 ARHGAP23Q9P227 1491 aa11.44□□□□□ -0.58
COPS4-201ENST00000264389 SLC24A1O60721 1099 aa11.44□□□□□ -0.58
COPS4-201ENST00000264389 HDGFP51858 240 aaKnown RBP11.44□□□□□ -0.58
COPS4-201ENST00000264389 DLC1Q96QB1 1528 aa11.44□□□□□ -0.58
COPS4-201ENST00000264389 CCER2I3L3R5 266 aa11.43□□□□□ -0.58
COPS4-201ENST00000264389 DIP2AQ14689 1571 aa11.43□□□□□ -0.58
COPS4-201ENST00000264389 YTHDC1Q96MU7 727 aaKnown RBP11.43□□□□□ -0.58
COPS4-201ENST00000264389 TULP4Q9NRJ4 1543 aa11.43□□□□□ -0.58
COPS4-201ENST00000264389 CPS1P31327 1500 aa11.42□□□□□ -0.58
COPS4-201ENST00000264389 PLEKHG1Q9ULL1 1385 aa11.41□□□□□ -0.58
COPS4-201ENST00000264389 PRKRIP1Q9H875 184 aaPredicted RBP11.4□□□□□ -0.58
COPS4-201ENST00000264389 LRPPRCP42704 1394 aaKnown RBP11.39□□□□□ -0.59
COPS4-201ENST00000264389 STK26Q9P289 416 aa11.39□□□□□ -0.59
COPS4-201ENST00000264389 BCANQ96GW7 911 aa11.38□□□□□ -0.59
COPS4-201ENST00000264389 EID1Q9Y6B2 187 aa11.38□□□□□ -0.59
COPS4-201ENST00000264389 ADAMTS13Q76LX8 1427 aa11.38□□□□□ -0.59
COPS4-201ENST00000264389 CENPBP07199 599 aaPredicted RBP11.38□□□□□ -0.59
COPS4-201ENST00000264389 THEMISQ8N1K5 641 aaPredicted RBP11.38□□□□□ -0.59
COPS4-201ENST00000264389 KTN1Q86UP2 1357 aaKnown RBP11.37□□□□□ -0.59
COPS4-201ENST00000264389 TECPR2O15040 1411 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms