RNA–Protein interactions for RNA: ENST00000262158.6

SMAD7-201, Transcript of SMAD family member 7, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMAD7, Length 3,087 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD7-201ENST00000262158 PDE3BQ13370 1112 aa25.45■■□□□ 1.67
SMAD7-201ENST00000262158 TRAK1Q9UPV9 953 aa25.45■■□□□ 1.67
SMAD7-201ENST00000262158 CARD14Q9BXL6 1004 aa25.45■■□□□ 1.66
SMAD7-201ENST00000262158 DMRT2Q9Y5R5 561 aa25.45■■□□□ 1.66
SMAD7-201ENST00000262158 APAF1O14727 1248 aa25.44■■□□□ 1.66
SMAD7-201ENST00000262158 ANP32AP39687 249 aaKnown RBP25.44■■□□□ 1.66
SMAD7-201ENST00000262158 ADGRL1O94910 1474 aa25.43■■□□□ 1.66
SMAD7-201ENST00000262158 RNF17Q9BXT8 1623 aaKnown RBP25.43■■□□□ 1.66
SMAD7-201ENST00000262158 WASHC2CQ9Y4E1 1318 aa25.43■■□□□ 1.66
SMAD7-201ENST00000262158 SCAF11Q99590 1463 aaKnown RBP25.43■■□□□ 1.66
SMAD7-201ENST00000262158 TRPM2O94759 1503 aa25.41■■□□□ 1.66
SMAD7-201ENST00000262158 ATP7AQ04656 1500 aa25.41■■□□□ 1.66
SMAD7-201ENST00000262158 NEUROD2Q15784 382 aa25.41■■□□□ 1.66
SMAD7-201ENST00000262158 LAMC1P11047 1609 aa25.41■■□□□ 1.66
SMAD7-201ENST00000262158 KANK1Q14678 1352 aa25.41■■□□□ 1.66
SMAD7-201ENST00000262158 DUSP27Q5VZP5 1158 aa25.4■■□□□ 1.66
SMAD7-201ENST00000262158 UHRF1BP1LA0JNW5 1464 aa25.4■■□□□ 1.66
SMAD7-201ENST00000262158 PDE4AP27815 886 aa25.4■■□□□ 1.66
SMAD7-201ENST00000262158 SPHKAPQ2M3C7 1700 aa25.4■■□□□ 1.66
SMAD7-201ENST00000262158 IPO9Q96P70 1041 aaKnown RBP25.39■■□□□ 1.65
SMAD7-201ENST00000262158 PTPRTO14522 1441 aa25.39■■□□□ 1.65
SMAD7-201ENST00000262158 SAFB2Q14151 953 aaKnown RBP eCLIP25.38■■□□□ 1.65
SMAD7-201ENST00000262158 IQGAP1P46940 1657 aa25.37■■□□□ 1.65
SMAD7-201ENST00000262158 ASXL2Q76L83 1435 aa25.36■■□□□ 1.65
SMAD7-201ENST00000262158 RRP7AQ9Y3A4 280 aaKnown RBP25.36■■□□□ 1.65
SMAD7-201ENST00000262158 BCAR3O75815 825 aa25.35■■□□□ 1.65
SMAD7-201ENST00000262158 SLC12A5Q9H2X9 1139 aa25.35■■□□□ 1.65
SMAD7-201ENST00000262158 RTEL1-TNFRSF6BF6WH68 1400 aa25.35■■□□□ 1.65
SMAD7-201ENST00000262158 ZBTB47Q9UFB7 747 aaPredicted RBP25.34■■□□□ 1.65
SMAD7-201ENST00000262158 ZMYM4Q5VZL5 1548 aa25.34■■□□□ 1.65
SMAD7-201ENST00000262158 GOLGA2Q08379 1002 aa25.34■■□□□ 1.65
SMAD7-201ENST00000262158 LAS1LQ9Y4W2 734 aaKnown RBP25.33■■□□□ 1.65
SMAD7-201ENST00000262158 CEP152O94986 1710 aa25.33■■□□□ 1.65
SMAD7-201ENST00000262158 RAPGEF3O95398 923 aa25.32■■□□□ 1.64
SMAD7-201ENST00000262158 NOS1P29475 1434 aa25.32■■□□□ 1.64
SMAD7-201ENST00000262158 CDCA8Q53HL2 280 aa25.31■■□□□ 1.64
SMAD7-201ENST00000262158 ASXL1Q8IXJ9 1541 aa25.31■■□□□ 1.64
SMAD7-201ENST00000262158 ERVK-7P63135 1459 aa25.29■■□□□ 1.64
SMAD7-201ENST00000262158 MYOM1P52179 1685 aa25.29■■□□□ 1.64
SMAD7-201ENST00000262158 TET3O43151 1660 aa25.28■■□□□ 1.64
SMAD7-201ENST00000262158 BACH2Q9BYV9 841 aa25.28■■□□□ 1.64
SMAD7-201ENST00000262158 TCERG1O14776 1098 aaKnown RBP25.28■■□□□ 1.64
SMAD7-201ENST00000262158 SLC4A3P48751 1232 aa25.27■■□□□ 1.64
SMAD7-201ENST00000262158 ZNF521Q96K83 1311 aa25.27■■□□□ 1.64
SMAD7-201ENST00000262158 INO80Q9ULG1 1556 aaPredicted RBP25.27■■□□□ 1.64
SMAD7-201ENST00000262158 MROH1Q8NDA8 1641 aa25.27■■□□□ 1.64
SMAD7-201ENST00000262158 ABCA6Q8N139 1617 aa25.27■■□□□ 1.64
SMAD7-201ENST00000262158 DEKP35659 375 aaKnown RBP25.27■■□□□ 1.64
SMAD7-201ENST00000262158 RGS3P49796 1198 aa25.26■■□□□ 1.63
SMAD7-201ENST00000262158 SLFN5Q08AF3 891 aa25.26■■□□□ 1.63
SMAD7-201ENST00000262158 EIF3AQ14152 1382 aaKnown RBP25.25■■□□□ 1.63
SMAD7-201ENST00000262158 MROH2AA6NES4 1674 aa25.25■■□□□ 1.63
SMAD7-201ENST00000262158 DEPDC5O75140 1603 aa25.25■■□□□ 1.63
SMAD7-201ENST00000262158 ABCA9Q8IUA7 1624 aa25.25■■□□□ 1.63
SMAD7-201ENST00000262158 SYNMO15061 1565 aa25.23■■□□□ 1.63
SMAD7-201ENST00000262158 CENPJQ9HC77 1338 aaPredicted RBP25.22■■□□□ 1.63
SMAD7-201ENST00000262158 STK26Q9P289 416 aa25.21■■□□□ 1.63
SMAD7-201ENST00000262158 PPRC1Q5VV67 1664 aaKnown RBP25.21■■□□□ 1.63
SMAD7-201ENST00000262158 NPM1P06748 294 aaKnown RBP eCLIP25.21■■□□□ 1.63
SMAD7-201ENST00000262158 BCL2L13Q9BXK5 485 aa25.2■■□□□ 1.62
SMAD7-201ENST00000262158 KIDINS220Q9ULH0 1771 aa25.2■■□□□ 1.62
SMAD7-201ENST00000262158 MAP3K4Q9Y6R4 1608 aa25.19■■□□□ 1.62
SMAD7-201ENST00000262158 VWDEQ8N2E2 1590 aa25.19■■□□□ 1.62
SMAD7-201ENST00000262158 MORC1Q86VD1 984 aa25.19■■□□□ 1.62
SMAD7-201ENST00000262158 TNNQ9UQP3 1299 aa25.18■■□□□ 1.62
SMAD7-201ENST00000262158 NSD3Q9BZ95 1437 aa25.18■■□□□ 1.62
SMAD7-201ENST00000262158 KDM5AP29375 1690 aaKnown RBP25.17■■□□□ 1.62
SMAD7-201ENST00000262158 NPATQ14207 1427 aa25.17■■□□□ 1.62
SMAD7-201ENST00000262158 PANK1Q8TE04 598 aa25.16■■□□□ 1.62
SMAD7-201ENST00000262158 FRAT1Q92837 279 aaPredicted RBP25.16■■□□□ 1.62
SMAD7-201ENST00000262158 CABP2Q9NPB3 220 aa25.16■■□□□ 1.62
SMAD7-201ENST00000262158 PIK3C2GO75747 1445 aa25.15■■□□□ 1.62
SMAD7-201ENST00000262158 EFCAB6Q5THR3 1501 aa25.15■■□□□ 1.62
SMAD7-201ENST00000262158 KDM2BQ8NHM5 1336 aa25.14■■□□□ 1.62
SMAD7-201ENST00000262158 ARAP3Q8WWN8 1544 aa25.13■■□□□ 1.61
SMAD7-201ENST00000262158 CD109Q6YHK3 1445 aa25.13■■□□□ 1.61
SMAD7-201ENST00000262158 KIF1BO60333 1816 aa25.13■■□□□ 1.61
SMAD7-201ENST00000262158 MTHFSP49914 203 aa25.12■■□□□ 1.61
SMAD7-201ENST00000262158 COG6Q9Y2V7 657 aa25.12■■□□□ 1.61
SMAD7-201ENST00000262158 IGHDP01880 384 aa25.11■■□□□ 1.61
SMAD7-201ENST00000262158 WWC1Q8IX03 1113 aa25.11■■□□□ 1.61
SMAD7-201ENST00000262158 TRMT2AQ8IZ69 625 aaKnown RBP25.09■■□□□ 1.61
SMAD7-201ENST00000262158 STAC3Q96MF2 364 aa25.09■■□□□ 1.61
SMAD7-201ENST00000262158 C14orf93Q9H972 538 aaKnown RBP25.09■■□□□ 1.61
SMAD7-201ENST00000262158 CANXP27824 592 aaKnown RBP25.08■■□□□ 1.61
SMAD7-201ENST00000262158 CLUAP1Q96AJ1 413 aa25.08■■□□□ 1.6
SMAD7-201ENST00000262158 INSRP06213 1382 aa25.08■■□□□ 1.6
SMAD7-201ENST00000262158 ZNF518AQ6AHZ1 1483 aa25.07■■□□□ 1.6
SMAD7-201ENST00000262158 MYOM2P54296 1465 aa25.07■■□□□ 1.6
SMAD7-201ENST00000262158 MS4A1P11836 297 aa25.07■■□□□ 1.6
SMAD7-201ENST00000262158 TCP11L2Q8N4U5 519 aa25.07■■□□□ 1.6
SMAD7-201ENST00000262158 OSCARQ8IYS5 282 aa25.05■■□□□ 1.6
SMAD7-201ENST00000262158 FRMPD1Q5SYB0 1578 aa25.05■■□□□ 1.6
SMAD7-201ENST00000262158 NKTRP30414 1462 aaKnown RBP25.04■■□□□ 1.6
SMAD7-201ENST00000262158 E9PSI1 815 aa25.04■■□□□ 1.6
SMAD7-201ENST00000262158 IDI1Q13907 227 aa25.04■■□□□ 1.6
SMAD7-201ENST00000262158 CENPQQ7L2Z9 268 aaPredicted RBP25.04■■□□□ 1.6
SMAD7-201ENST00000262158 FBLN1P23142 703 aa25.04■■□□□ 1.6
SMAD7-201ENST00000262158 GOLGA6L2Q8N9W4 650 aaPredicted RBP25.04■■□□□ 1.6
SMAD7-201ENST00000262158 RTL5Q5HYW3 569 aaPredicted RBP25.03■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms