RNA–Protein interactions for RNA: ENST00000259216.4

CFC1-201, Transcript of cripto, FRL-1, cryptic family 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CFC1, Length 1,046 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFC1-201ENST00000259216 SLC26A8Q96RN1 970 aa30.62■■■□□ 2.49
CFC1-201ENST00000259216 NWD1Q149M9 1564 aa30.61■■■□□ 2.49
CFC1-201ENST00000259216 TRPM2O94759 1503 aa30.59■■■□□ 2.49
CFC1-201ENST00000259216 CLTCL1P53675 1640 aa30.57■■■□□ 2.48
CFC1-201ENST00000259216 TOM1O60784 492 aa30.56■■■□□ 2.48
CFC1-201ENST00000259216 CHGAP10645 457 aaKnown RBP30.56■■■□□ 2.48
CFC1-201ENST00000259216 KCNA6P17658 529 aa30.56■■■□□ 2.48
CFC1-201ENST00000259216 ADAMTS13Q76LX8 1427 aa30.56■■■□□ 2.48
CFC1-201ENST00000259216 ABCF1Q8NE71 845 aaKnown RBP eCLIP30.53■■■□□ 2.48
CFC1-201ENST00000259216 NKTRP30414 1462 aaKnown RBP30.52■■■□□ 2.48
CFC1-201ENST00000259216 HDGFP51858 240 aaKnown RBP30.52■■■□□ 2.48
CFC1-201ENST00000259216 PPP1R15AO75807 674 aaPredicted RBP30.5■■■□□ 2.47
CFC1-201ENST00000259216 NUTM2DQ5VT03 806 aaPredicted RBP30.49■■■□□ 2.47
CFC1-201ENST00000259216 TBX22Q9Y458 520 aa30.49■■■□□ 2.47
CFC1-201ENST00000259216 TMEM94Q12767 1356 aa30.49■■■□□ 2.47
CFC1-201ENST00000259216 CHD2O14647 1828 aaKnown RBP30.49■■■□□ 2.47
CFC1-201ENST00000259216 PIP4K2BP78356 416 aa30.48■■■□□ 2.47
CFC1-201ENST00000259216 TRIM52Q96A61 297 aa30.48■■■□□ 2.47
CFC1-201ENST00000259216 SENP3Q9H4L4 574 aaPredicted RBP30.48■■■□□ 2.47
CFC1-201ENST00000259216 DIP2AQ14689 1571 aa30.47■■■□□ 2.47
CFC1-201ENST00000259216 NRXN3Q9Y4C0 1643 aa30.46■■■□□ 2.47
CFC1-201ENST00000259216 NEXMIFQ5QGS0 1516 aa30.44■■■□□ 2.46
CFC1-201ENST00000259216 HSPA1LP34931 641 aa30.44■■■□□ 2.46
CFC1-201ENST00000259216 BCANQ96GW7 911 aa30.44■■■□□ 2.46
CFC1-201ENST00000259216 SLC4A1APQ9BWU0 796 aaKnown RBP30.44■■■□□ 2.46
CFC1-201ENST00000259216 SETBP1Q9Y6X0 1596 aa30.43■■■□□ 2.46
CFC1-201ENST00000259216 SCAF1Q9H7N4 1312 aaKnown RBP30.41■■■□□ 2.46
CFC1-201ENST00000259216 PROSER2Q86WR7 435 aaPredicted RBP30.4■■■□□ 2.46
CFC1-201ENST00000259216 PIK3R4Q99570 1358 aa30.4■■■□□ 2.46
CFC1-201ENST00000259216 RBM33Q96EV2 1170 aaKnown RBP30.39■■■□□ 2.46
CFC1-201ENST00000259216 KIF1BO60333 1816 aa30.38■■■□□ 2.45
CFC1-201ENST00000259216 PTPRUQ92729 1446 aa30.37■■■□□ 2.45
CFC1-201ENST00000259216 SETD5Q9C0A6 1442 aa30.34■■■□□ 2.45
CFC1-201ENST00000259216 FOXD1Q16676 465 aa30.34■■■□□ 2.45
CFC1-201ENST00000259216 ZNF326Q5BKZ1 582 aaKnown RBP30.33■■■□□ 2.45
CFC1-201ENST00000259216 XRN1Q8IZH2 1706 aaKnown RBP30.31■■■□□ 2.44
CFC1-201ENST00000259216 MPHOSPH9Q99550 1183 aa30.31■■■□□ 2.44
CFC1-201ENST00000259216 FAM135BQ49AJ0 1406 aa30.3■■■□□ 2.44
CFC1-201ENST00000259216 NCOA3Q9Y6Q9 1424 aa30.3■■■□□ 2.44
CFC1-201ENST00000259216 DISP3Q9P2K9 1392 aa30.28■■■□□ 2.44
CFC1-201ENST00000259216 METP08581 1390 aa30.28■■■□□ 2.44
CFC1-201ENST00000259216 SPATA31E1Q6ZUB1 1445 aa30.25■■■□□ 2.43
CFC1-201ENST00000259216 MSH6P52701 1360 aa30.25■■■□□ 2.43
CFC1-201ENST00000259216 RAB3GAP2Q9H2M9 1393 aa30.25■■■□□ 2.43
CFC1-201ENST00000259216 SETD1AO15047 1707 aaKnown RBP30.25■■■□□ 2.43
CFC1-201ENST00000259216 PPLO60437 1756 aa30.24■■■□□ 2.43
CFC1-201ENST00000259216 AMOTL2Q9Y2J4 779 aa30.24■■■□□ 2.43
CFC1-201ENST00000259216 RPGRIP1LQ68CZ1 1315 aa30.22■■■□□ 2.43
CFC1-201ENST00000259216 ACIN1Q9UKV3 1341 aaKnown RBP30.22■■■□□ 2.43
CFC1-201ENST00000259216 ROBO1Q9Y6N7 1651 aa30.21■■■□□ 2.43
CFC1-201ENST00000259216 CCDC144AA2RUR9 1427 aa30.21■■■□□ 2.43
CFC1-201ENST00000259216 MED1Q15648 1581 aaPredicted RBP30.19■■■□□ 2.42
CFC1-201ENST00000259216 SIPA1L2Q9P2F8 1722 aaPredicted RBP30.18■■■□□ 2.42
CFC1-201ENST00000259216 VGFO15240 615 aaPredicted RBP30.17■■■□□ 2.42
CFC1-201ENST00000259216 ILDR2Q71H61 639 aa30.16■■■□□ 2.42
CFC1-201ENST00000259216 SLAIN2Q9P270 581 aa30.15■■■□□ 2.42
CFC1-201ENST00000259216 IFT172Q9UG01 1749 aa30.14■■■□□ 2.42
CFC1-201ENST00000259216 PRAG1Q86YV5 1406 aa30.13■■■□□ 2.41
CFC1-201ENST00000259216 C19orf44Q9H6X5 657 aa30.13■■■□□ 2.41
CFC1-201ENST00000259216 DCCP43146 1447 aa30.09■■■□□ 2.41
CFC1-201ENST00000259216 ADGRF5Q8IZF2 1346 aa30.08■■■□□ 2.41
CFC1-201ENST00000259216 PTCH1Q13635 1447 aa30.07■■■□□ 2.4
CFC1-201ENST00000259216 C14orf37Q86TY3 774 aa30.06■■■□□ 2.4
CFC1-201ENST00000259216 CADPS2Q86UW7 1296 aa30.06■■■□□ 2.4
CFC1-201ENST00000259216 ANKRD30BQ9BXX2 1392 aa30.05■■■□□ 2.4
CFC1-201ENST00000259216 HRCP23327 699 aa30.05■■■□□ 2.4
CFC1-201ENST00000259216 RGL3Q3MIN7 710 aa30.05■■■□□ 2.4
CFC1-201ENST00000259216 ADGRL3Q9HAR2 1447 aa30.05■■■□□ 2.4
CFC1-201ENST00000259216 NALCNQ8IZF0 1738 aa30.04■■■□□ 2.4
CFC1-201ENST00000259216 ROBO2Q9HCK4 1378 aa30.03■■■□□ 2.4
CFC1-201ENST00000259216 ASXL1Q8IXJ9 1541 aa30.01■■■□□ 2.4
CFC1-201ENST00000259216 ATF3P18847 181 aa30.01■■■□□ 2.39
CFC1-201ENST00000259216 PIK3C2GO75747 1445 aa30.01■■■□□ 2.39
CFC1-201ENST00000259216 COL16A1Q07092 1604 aaPredicted RBP30■■■□□ 2.39
CFC1-201ENST00000259216 MST1RQ04912 1400 aa30■■■□□ 2.39
CFC1-201ENST00000259216 PHLPP1O60346 1717 aa29.99■■■□□ 2.39
CFC1-201ENST00000259216 NRXN1Q9ULB1 1477 aa29.99■■■□□ 2.39
CFC1-201ENST00000259216 AHDC1Q5TGY3 1603 aaPredicted RBP29.98■■■□□ 2.39
CFC1-201ENST00000259216 TECPR2O15040 1411 aa29.95■■■□□ 2.38
CFC1-201ENST00000259216 MYOM2P54296 1465 aa29.94■■■□□ 2.38
CFC1-201ENST00000259216 BRINP3Q76B58 766 aa29.94■■■□□ 2.38
CFC1-201ENST00000259216 LRPPRCP42704 1394 aaKnown RBP29.9■■■□□ 2.38
CFC1-201ENST00000259216 KNDC1Q76NI1 1749 aa29.87■■■□□ 2.37
CFC1-201ENST00000259216 ABCC11Q96J66 1382 aa29.87■■■□□ 2.37
CFC1-201ENST00000259216 JCADQ9P266 1359 aa29.87■■■□□ 2.37
CFC1-201ENST00000259216 NHSL1Q5SYE7 1610 aa29.86■■■□□ 2.37
CFC1-201ENST00000259216 C14orf93Q9H972 538 aaKnown RBP29.85■■■□□ 2.37
CFC1-201ENST00000259216 RGS17Q9UGC6 210 aaPredicted RBP29.85■■■□□ 2.37
CFC1-201ENST00000259216 C1orf167Q5SNV9 1468 aa29.85■■■□□ 2.37
CFC1-201ENST00000259216 TMEM132EQ6IEE7 984 aa29.84■■■□□ 2.37
CFC1-201ENST00000259216 YTHDC2Q9H6S0 1430 aaKnown RBP29.82■■■□□ 2.36
CFC1-201ENST00000259216 SOCS7O14512 581 aa29.82■■■□□ 2.36
CFC1-201ENST00000259216 LAMC1P11047 1609 aa29.82■■■□□ 2.36
CFC1-201ENST00000259216 CDC42BPGQ6DT37 1551 aa29.81■■■□□ 2.36
CFC1-201ENST00000259216 PLEKHH1Q9ULM0 1364 aa29.79■■■□□ 2.36
CFC1-201ENST00000259216 SHPRHQ149N8 1683 aa29.79■■■□□ 2.36
CFC1-201ENST00000259216 CFAP70Q5T0N1 1121 aa29.79■■■□□ 2.36
CFC1-201ENST00000259216 PHF23Q9BUL5 403 aaPredicted RBP29.79■■■□□ 2.36
CFC1-201ENST00000259216 STK26Q9P289 416 aa29.78■■■□□ 2.36
CFC1-201ENST00000259216 WAPLQ7Z5K2 1190 aa29.77■■■□□ 2.36
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms