RNA–Protein interactions for RNA: ENST00000253452.6

COX4I1-201, Transcript of cytochrome c oxidase subunit 4I1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COX4I1, Length 708 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COX4I1-201ENST00000253452 PPP1R15AO75807 674 aaPredicted RBP22.05■■□□□ 1.12
COX4I1-201ENST00000253452 XIRP1Q702N8 1843 aaKnown RBP22.04■■□□□ 1.12
COX4I1-201ENST00000253452 PLEKHG1Q9ULL1 1385 aa22.04■■□□□ 1.12
COX4I1-201ENST00000253452 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.04■■□□□ 1.12
COX4I1-201ENST00000253452 RBM33Q96EV2 1170 aaKnown RBP22.04■■□□□ 1.12
COX4I1-201ENST00000253452 TBX22Q9Y458 520 aa22.03■■□□□ 1.12
COX4I1-201ENST00000253452 ZFYVE9O95405 1425 aa22.03■■□□□ 1.12
COX4I1-201ENST00000253452 MSH6P52701 1360 aa22.02■■□□□ 1.12
COX4I1-201ENST00000253452 RIMS2Q9UQ26 1411 aa22.02■■□□□ 1.12
COX4I1-201ENST00000253452 ROCK1Q13464 1354 aa22.01■■□□□ 1.11
COX4I1-201ENST00000253452 RGS17Q9UGC6 210 aaPredicted RBP22.01■■□□□ 1.11
COX4I1-201ENST00000253452 NWD1Q149M9 1564 aa22■■□□□ 1.11
COX4I1-201ENST00000253452 SLAIN2Q9P270 581 aa22■■□□□ 1.11
COX4I1-201ENST00000253452 CHGAP10645 457 aaKnown RBP21.99■■□□□ 1.11
COX4I1-201ENST00000253452 NCOA3Q9Y6Q9 1424 aa21.97■■□□□ 1.11
COX4I1-201ENST00000253452 TMEM131LA2VDJ0 1609 aa21.95■■□□□ 1.1
COX4I1-201ENST00000253452 UNC13BO14795 1591 aa21.95■■□□□ 1.1
COX4I1-201ENST00000253452 NUP155O75694 1391 aa21.93■■□□□ 1.1
COX4I1-201ENST00000253452 ROBO1Q9Y6N7 1651 aa21.93■■□□□ 1.1
COX4I1-201ENST00000253452 GCC2Q8IWJ2 1684 aa21.92■■□□□ 1.1
COX4I1-201ENST00000253452 PIK3R4Q99570 1358 aa21.92■■□□□ 1.1
COX4I1-201ENST00000253452 NUTM2DQ5VT03 806 aaPredicted RBP21.9■■□□□ 1.1
COX4I1-201ENST00000253452 C14orf37Q86TY3 774 aa21.9■■□□□ 1.1
COX4I1-201ENST00000253452 ADAMTS13Q76LX8 1427 aa21.89■■□□□ 1.1
COX4I1-201ENST00000253452 CADPS2Q86UW7 1296 aa21.89■■□□□ 1.09
COX4I1-201ENST00000253452 C19orf44Q9H6X5 657 aa21.89■■□□□ 1.09
COX4I1-201ENST00000253452 JCADQ9P266 1359 aa21.88■■□□□ 1.09
COX4I1-201ENST00000253452 ITGAEP38570 1179 aa21.88■■□□□ 1.09
COX4I1-201ENST00000253452 POTEAQ6S8J7 498 aa21.88■■□□□ 1.09
COX4I1-201ENST00000253452 IQGAP3Q86VI3 1631 aa21.87■■□□□ 1.09
COX4I1-201ENST00000253452 CHD2O14647 1828 aaKnown RBP21.87■■□□□ 1.09
COX4I1-201ENST00000253452 E9PCH4 1651 aa21.86■■□□□ 1.09
COX4I1-201ENST00000253452 ATF3P18847 181 aa21.86■■□□□ 1.09
COX4I1-201ENST00000253452 DIP2AQ14689 1571 aa21.86■■□□□ 1.09
COX4I1-201ENST00000253452 AMOTL2Q9Y2J4 779 aa21.84■■□□□ 1.09
COX4I1-201ENST00000253452 MYO5BQ9ULV0 1848 aa21.83■■□□□ 1.09
COX4I1-201ENST00000253452 SPATA31A6Q5VVP1 1343 aa21.8■■□□□ 1.08
COX4I1-201ENST00000253452 TRPM2O94759 1503 aa21.8■■□□□ 1.08
COX4I1-201ENST00000253452 PHLPP1O60346 1717 aa21.79■■□□□ 1.08
COX4I1-201ENST00000253452 ZNF326Q5BKZ1 582 aaKnown RBP21.77■■□□□ 1.08
COX4I1-201ENST00000253452 PPARGC1BQ86YN6 1023 aaKnown RBP21.77■■□□□ 1.08
COX4I1-201ENST00000253452 PTPRUQ92729 1446 aa21.77■■□□□ 1.08
COX4I1-201ENST00000253452 COL16A1Q07092 1604 aaPredicted RBP21.74■■□□□ 1.07
COX4I1-201ENST00000253452 BRINP3Q76B58 766 aa21.74■■□□□ 1.07
COX4I1-201ENST00000253452 DCCP43146 1447 aa21.73■■□□□ 1.07
COX4I1-201ENST00000253452 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.73■■□□□ 1.07
COX4I1-201ENST00000253452 MEX3CQ5U5Q3 659 aaKnown RBP21.73■■□□□ 1.07
COX4I1-201ENST00000253452 ZNF772Q68DY9 489 aaPredicted RBP21.72■■□□□ 1.07
COX4I1-201ENST00000253452 AHDC1Q5TGY3 1603 aaPredicted RBP21.72■■□□□ 1.07
COX4I1-201ENST00000253452 SETBP1Q9Y6X0 1596 aa21.71■■□□□ 1.07
COX4I1-201ENST00000253452 METP08581 1390 aa21.69■■□□□ 1.06
COX4I1-201ENST00000253452 LRP6O75581 1613 aa21.67■■□□□ 1.06
COX4I1-201ENST00000253452 SPHKAPQ2M3C7 1700 aa21.66■■□□□ 1.06
COX4I1-201ENST00000253452 NRXN3Q9Y4C0 1643 aa21.66■■□□□ 1.06
COX4I1-201ENST00000253452 RRBP1Q9P2E9 1410 aaKnown RBP21.65■■□□□ 1.06
COX4I1-201ENST00000253452 MST1RQ04912 1400 aa21.64■■□□□ 1.06
COX4I1-201ENST00000253452 XRN1Q8IZH2 1706 aaKnown RBP21.64■■□□□ 1.06
COX4I1-201ENST00000253452 VGFO15240 615 aaPredicted RBP21.64■■□□□ 1.05
COX4I1-201ENST00000253452 LRRC59Q96AG4 307 aaKnown RBP21.64■■□□□ 1.05
COX4I1-201ENST00000253452 NAIPQ13075 1403 aa21.63■■□□□ 1.05
COX4I1-201ENST00000253452 SETD5Q9C0A6 1442 aa21.63■■□□□ 1.05
COX4I1-201ENST00000253452 NUTM2BA6NNL0 878 aaPredicted RBP21.62■■□□□ 1.05
COX4I1-201ENST00000253452 NUTM2EB1AL46 878 aaPredicted RBP21.62■■□□□ 1.05
COX4I1-201ENST00000253452 NUTM2AQ8IVF1 878 aaPredicted RBP21.62■■□□□ 1.05
COX4I1-201ENST00000253452 SHPRHQ149N8 1683 aa21.62■■□□□ 1.05
COX4I1-201ENST00000253452 ADGRL3Q9HAR2 1447 aa21.62■■□□□ 1.05
COX4I1-201ENST00000253452 NEXMIFQ5QGS0 1516 aa21.61■■□□□ 1.05
COX4I1-201ENST00000253452 ASXL1Q8IXJ9 1541 aa21.61■■□□□ 1.05
COX4I1-201ENST00000253452 TRIM52Q96A61 297 aa21.61■■□□□ 1.05
COX4I1-201ENST00000253452 RXRBP28702 533 aa21.6■■□□□ 1.05
COX4I1-201ENST00000253452 RPGRIP1LQ68CZ1 1315 aa21.59■■□□□ 1.05
COX4I1-201ENST00000253452 CLTCL1P53675 1640 aa21.59■■□□□ 1.05
COX4I1-201ENST00000253452 SLC4A1APQ9BWU0 796 aaKnown RBP21.56■■□□□ 1.04
COX4I1-201ENST00000253452 HFM1A2PYH4 1435 aa21.55■■□□□ 1.04
COX4I1-201ENST00000253452 AFF2P51816 1311 aa21.55■■□□□ 1.04
COX4I1-201ENST00000253452 UPF1Q92900 1129 aaKnown RBP eCLIP21.54■■□□□ 1.04
COX4I1-201ENST00000253452 PTCH1Q13635 1447 aa21.54■■□□□ 1.04
COX4I1-201ENST00000253452 DDX17Q92841 729 aaKnown RBP21.52■■□□□ 1.04
COX4I1-201ENST00000253452 C1orf167Q5SNV9 1468 aa21.52■■□□□ 1.03
COX4I1-201ENST00000253452 PNPLA6Q8IY17 1366 aa21.51■■□□□ 1.03
COX4I1-201ENST00000253452 CDK12Q9NYV4 1490 aaPredicted RBP21.51■■□□□ 1.03
COX4I1-201ENST00000253452 NHSL1Q5SYE7 1610 aa21.51■■□□□ 1.03
COX4I1-201ENST00000253452 ROBO2Q9HCK4 1378 aa21.5■■□□□ 1.03
COX4I1-201ENST00000253452 SETD1AO15047 1707 aaKnown RBP21.5■■□□□ 1.03
COX4I1-201ENST00000253452 KIF1BO60333 1816 aa21.5■■□□□ 1.03
COX4I1-201ENST00000253452 PRAG1Q86YV5 1406 aa21.49■■□□□ 1.03
COX4I1-201ENST00000253452 C8orf37Q96NL8 207 aa21.49■■□□□ 1.03
COX4I1-201ENST00000253452 ORAI2Q96SN7 254 aa21.48■■□□□ 1.03
COX4I1-201ENST00000253452 QTRT2Q9H974 415 aaKnown RBP21.48■■□□□ 1.03
COX4I1-201ENST00000253452 SOS2Q07890 1332 aaPredicted RBP21.47■■□□□ 1.03
COX4I1-201ENST00000253452 RBM6P78332 1123 aaKnown RBP21.46■■□□□ 1.03
COX4I1-201ENST00000253452 NALCNQ8IZF0 1738 aa21.46■■□□□ 1.03
COX4I1-201ENST00000253452 NGLY1Q96IV0 654 aa21.45■■□□□ 1.02
COX4I1-201ENST00000253452 ADAMTS2O95450 1211 aa21.43■■□□□ 1.02
COX4I1-201ENST00000253452 FOXD1Q16676 465 aa21.4■■□□□ 1.02
COX4I1-201ENST00000253452 LAMC1P11047 1609 aa21.4■■□□□ 1.02
COX4I1-201ENST00000253452 CCDC144AA2RUR9 1427 aa21.39■■□□□ 1.02
COX4I1-201ENST00000253452 ADGRF5Q8IZF2 1346 aa21.39■■□□□ 1.01
COX4I1-201ENST00000253452 ESCO1Q5FWF5 840 aa21.39■■□□□ 1.01
COX4I1-201ENST00000253452 NPHP3Q7Z494 1330 aa21.38■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms