RNA–Protein interactions for RNA: ENST00000252211.6

ZKSCAN3-201, Transcript of zinc finger with KRAB and SCAN domains 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZKSCAN3, Length 4,725 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZKSCAN3-201ENST00000252211 APAF1O14727 1248 aa15.35■□□□□ 0.05
ZKSCAN3-201ENST00000252211 HSP90AB1P08238 724 aaKnown RBP15.35■□□□□ 0.05
ZKSCAN3-201ENST00000252211 DCAF8Q5TAQ9 597 aa15.35■□□□□ 0.05
ZKSCAN3-201ENST00000252211 ERICH6BQ5W0A0 696 aa15.35■□□□□ 0.05
ZKSCAN3-201ENST00000252211 ISY1Q9ULR0 285 aaKnown RBP15.35■□□□□ 0.05
ZKSCAN3-201ENST00000252211 SUPT6HQ7KZ85 1726 aaKnown RBP15.35■□□□□ 0.05
ZKSCAN3-201ENST00000252211 GPATCH3Q96I76 525 aa15.35■□□□□ 0.05
ZKSCAN3-201ENST00000252211 KIF7Q2M1P5 1343 aa15.35■□□□□ 0.05
ZKSCAN3-201ENST00000252211 E9PSI1 815 aa15.35■□□□□ 0.05
ZKSCAN3-201ENST00000252211 ANKRD30BQ9BXX2 1392 aa15.34■□□□□ 0.05
ZKSCAN3-201ENST00000252211 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.34■□□□□ 0.05
ZKSCAN3-201ENST00000252211 MSH5O43196 834 aa15.34■□□□□ 0.05
ZKSCAN3-201ENST00000252211 CCDC7Q96M83 1385 aa15.33■□□□□ 0.05
ZKSCAN3-201ENST00000252211 NBPF1Q3BBV0 1214 aa15.33■□□□□ 0.04
ZKSCAN3-201ENST00000252211 RIPK4P57078 832 aa15.32■□□□□ 0.04
ZKSCAN3-201ENST00000252211 NEXNQ0ZGT2 675 aa15.32■□□□□ 0.04
ZKSCAN3-201ENST00000252211 ROCK1Q13464 1354 aa15.32■□□□□ 0.04
ZKSCAN3-201ENST00000252211 EIF2S2P20042 333 aaKnown RBP15.31■□□□□ 0.04
ZKSCAN3-201ENST00000252211 ZNF692Q9BU19 519 aaPredicted RBP15.3■□□□□ 0.04
ZKSCAN3-201ENST00000252211 ERBINQ96RT1 1412 aa15.3■□□□□ 0.04
ZKSCAN3-201ENST00000252211 FRAT2O75474 233 aaPredicted RBP15.3■□□□□ 0.04
ZKSCAN3-201ENST00000252211 DENND4BO75064 1496 aaPredicted RBP15.29■□□□□ 0.04
ZKSCAN3-201ENST00000252211 TPRNQ4KMQ1 711 aa15.29■□□□□ 0.04
ZKSCAN3-201ENST00000252211 HSCBQ8IWL3 235 aa15.29■□□□□ 0.04
ZKSCAN3-201ENST00000252211 RUNDC1Q96C34 613 aa15.29■□□□□ 0.04
ZKSCAN3-201ENST00000252211 HMOX1P09601 288 aa15.28■□□□□ 0.04
ZKSCAN3-201ENST00000252211 CDK19Q9BWU1 502 aa15.28■□□□□ 0.04
ZKSCAN3-201ENST00000252211 BCL2L13Q9BXK5 485 aa15.28■□□□□ 0.04
ZKSCAN3-201ENST00000252211 KIF14Q15058 1648 aa15.28■□□□□ 0.04
ZKSCAN3-201ENST00000252211 ZKSCAN2Q63HK3 967 aa15.27■□□□□ 0.04
ZKSCAN3-201ENST00000252211 DDX58O95786 925 aaKnown RBP15.27■□□□□ 0.03
ZKSCAN3-201ENST00000252211 PCF11O94913 1555 aaKnown RBP15.27■□□□□ 0.03
ZKSCAN3-201ENST00000252211 MTHFSP49914 203 aa15.26■□□□□ 0.03
ZKSCAN3-201ENST00000252211 TRIM6-TRIM34B2RNG4 842 aa15.26■□□□□ 0.03
ZKSCAN3-201ENST00000252211 CABP1Q9NZU7 370 aa15.26■□□□□ 0.03
ZKSCAN3-201ENST00000252211 USP35Q9P2H5 1018 aa15.26■□□□□ 0.03
ZKSCAN3-201ENST00000252211 CAMSAP2Q08AD1 1489 aa15.26■□□□□ 0.03
ZKSCAN3-201ENST00000252211 FANCAO15360 1455 aa15.26■□□□□ 0.03
ZKSCAN3-201ENST00000252211 SLC12A5Q9H2X9 1139 aa15.26■□□□□ 0.03
ZKSCAN3-201ENST00000252211 PPP6R1Q9UPN7 881 aa15.26■□□□□ 0.03
ZKSCAN3-201ENST00000252211 AKNAQ7Z591 1439 aa15.25■□□□□ 0.03
ZKSCAN3-201ENST00000252211 RTEL1-TNFRSF6BF6WH68 1400 aa15.25■□□□□ 0.03
ZKSCAN3-201ENST00000252211 GNAI1P63096 354 aa15.25■□□□□ 0.03
ZKSCAN3-201ENST00000252211 BIVM-ERCC5R4GMW8 1640 aa15.25■□□□□ 0.03
ZKSCAN3-201ENST00000252211 TULP1O00294 542 aaPredicted RBP15.24■□□□□ 0.03
ZKSCAN3-201ENST00000252211 C9orf78Q9NZ63 289 aaPredicted RBP15.24■□□□□ 0.03
ZKSCAN3-201ENST00000252211 TSPYL4Q9UJ04 414 aa15.24■□□□□ 0.03
ZKSCAN3-201ENST00000252211 GOLGA6L4A6NEF3 574 aa15.24■□□□□ 0.03
ZKSCAN3-201ENST00000252211 NAIPQ13075 1403 aa15.24■□□□□ 0.03
ZKSCAN3-201ENST00000252211 API5Q9BZZ5 524 aaKnown RBP15.23■□□□□ 0.03
ZKSCAN3-201ENST00000252211 STRN4Q9NRL3 753 aa15.22■□□□□ 0.03
ZKSCAN3-201ENST00000252211 NBPF8Q3BBV2 869 aa15.22■□□□□ 0.03
ZKSCAN3-201ENST00000252211 ABCC5O15440 1437 aa15.22■□□□□ 0.03
ZKSCAN3-201ENST00000252211 NECTIN2Q92692 538 aa15.22■□□□□ 0.03
ZKSCAN3-201ENST00000252211 CEBPAP49715 358 aaPredicted RBP15.22■□□□□ 0.03
ZKSCAN3-201ENST00000252211 ZBED9Q6R2W3 1325 aa15.22■□□□□ 0.03
ZKSCAN3-201ENST00000252211 GAS2L2Q8NHY3 880 aa15.21■□□□□ 0.03
ZKSCAN3-201ENST00000252211 FKBP5Q13451 457 aaPredicted RBP15.21■□□□□ 0.03
ZKSCAN3-201ENST00000252211 PLEKHO1Q53GL0 409 aaPredicted RBP15.21■□□□□ 0.03
ZKSCAN3-201ENST00000252211 PHF23Q9BUL5 403 aaPredicted RBP15.21■□□□□ 0.03
ZKSCAN3-201ENST00000252211 ATAD2Q6PL18 1390 aa15.21■□□□□ 0.02
ZKSCAN3-201ENST00000252211 WASHC2AQ641Q2 1341 aa15.2■□□□□ 0.02
ZKSCAN3-201ENST00000252211 PRDM11Q9NQV5 511 aa15.2■□□□□ 0.02
ZKSCAN3-201ENST00000252211 CCDC61Q9Y6R9 512 aa15.2■□□□□ 0.02
ZKSCAN3-201ENST00000252211 TCERG1O14776 1098 aaKnown RBP15.2■□□□□ 0.02
ZKSCAN3-201ENST00000252211 GNL2Q13823 731 aaKnown RBP15.2■□□□□ 0.02
ZKSCAN3-201ENST00000252211 FBXO31Q5XUX0 539 aaPredicted RBP15.2■□□□□ 0.02
ZKSCAN3-201ENST00000252211 CNTLNQ9NXG0 1405 aa15.2■□□□□ 0.02
ZKSCAN3-201ENST00000252211 NUTM2BA6NNL0 878 aaPredicted RBP15.19■□□□□ 0.02
ZKSCAN3-201ENST00000252211 NUTM2EB1AL46 878 aaPredicted RBP15.19■□□□□ 0.02
ZKSCAN3-201ENST00000252211 NUTM2AQ8IVF1 878 aaPredicted RBP15.19■□□□□ 0.02
ZKSCAN3-201ENST00000252211 MAP3K1Q13233 1512 aa15.19■□□□□ 0.02
ZKSCAN3-201ENST00000252211 IDI1Q13907 227 aa15.19■□□□□ 0.02
ZKSCAN3-201ENST00000252211 SMG6Q86US8 1419 aaKnown RBP15.19■□□□□ 0.02
ZKSCAN3-201ENST00000252211 PIP4K2BP78356 416 aa15.19■□□□□ 0.02
ZKSCAN3-201ENST00000252211 ASXL2Q76L83 1435 aa15.19■□□□□ 0.02
ZKSCAN3-201ENST00000252211 TATP17735 454 aaPredicted RBP15.18■□□□□ 0.02
ZKSCAN3-201ENST00000252211 TOM1L2Q6ZVM7 507 aa15.17■□□□□ 0.02
ZKSCAN3-201ENST00000252211 DHX29Q7Z478 1369 aaKnown RBP15.17■□□□□ 0.02
ZKSCAN3-201ENST00000252211 NCOA1Q15788 1441 aa15.17■□□□□ 0.02
ZKSCAN3-201ENST00000252211 TEX14Q8IWB6 1497 aa15.17■□□□□ 0.02
ZKSCAN3-201ENST00000252211 TRIM44Q96DX7 344 aaPredicted RBP15.16■□□□□ 0.02
ZKSCAN3-201ENST00000252211 PRKAR2BP31323 418 aa15.16■□□□□ 0.02
ZKSCAN3-201ENST00000252211 NUDT16Q96DE0 195 aaKnown RBP15.16■□□□□ 0.02
ZKSCAN3-201ENST00000252211 DDX19BQ9UMR2 479 aa15.16■□□□□ 0.02
ZKSCAN3-201ENST00000252211 DMRT2Q9Y5R5 561 aa15.16■□□□□ 0.02
ZKSCAN3-201ENST00000252211 PPP2R1AP30153 589 aa15.15■□□□□ 0.02
ZKSCAN3-201ENST00000252211 COG6Q9Y2V7 657 aa15.15■□□□□ 0.02
ZKSCAN3-201ENST00000252211 BRD4O60885 1362 aaPredicted RBP15.15■□□□□ 0.02
ZKSCAN3-201ENST00000252211 KIF16BQ96L93 1317 aa15.15■□□□□ 0.02
ZKSCAN3-201ENST00000252211 PTMAP06454 111 aaKnown RBP15.15■□□□□ 0.02
ZKSCAN3-201ENST00000252211 TCP11L2Q8N4U5 519 aa15.14■□□□□ 0.01
ZKSCAN3-201ENST00000252211 TOMM22Q9NS69 142 aa15.14■□□□□ 0.01
ZKSCAN3-201ENST00000252211 ATP10BO94823 1461 aa15.14■□□□□ 0.01
ZKSCAN3-201ENST00000252211 DZIP1LQ8IYY4 767 aaKnown RBP15.14■□□□□ 0.01
ZKSCAN3-201ENST00000252211 PTPN23Q9H3S7 1636 aa15.13■□□□□ 0.01
ZKSCAN3-201ENST00000252211 PLIN1O60240 522 aa15.13■□□□□ 0.01
ZKSCAN3-201ENST00000252211 LRRFIP1Q32MZ4 808 aaKnown RBP15.13■□□□□ 0.01
ZKSCAN3-201ENST00000252211 RIC3Q7Z5B4 369 aa15.13■□□□□ 0.01
ZKSCAN3-201ENST00000252211 ADAMTS8Q9UP79 889 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms