RNA–Protein interactions for RNA: ENST00000247295.4

FAM78A-201, Transcript of family with sequence similarity 78 member A, humanhuman

TSL 2

Gene FAM78A, Length 4,560 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM78A-201ENST00000247295 CNTLNQ9NXG0 1405 aa14.08□□□□□ -0.16
FAM78A-201ENST00000247295 FOXD4L6Q3SYB3 417 aaPredicted RBP14.08□□□□□ -0.16
FAM78A-201ENST00000247295 FOXD4L3Q6VB84 417 aaPredicted RBP14.08□□□□□ -0.16
FAM78A-201ENST00000247295 RRBP1Q9P2E9 1410 aaKnown RBP14.07□□□□□ -0.16
FAM78A-201ENST00000247295 PRXQ9BXM0 1461 aa14.07□□□□□ -0.16
FAM78A-201ENST00000247295 EIF2S2P20042 333 aaKnown RBP14.07□□□□□ -0.16
FAM78A-201ENST00000247295 NGEFQ8N5V2 710 aa14.07□□□□□ -0.16
FAM78A-201ENST00000247295 UBE2Q2Q8WVN8 375 aa14.07□□□□□ -0.16
FAM78A-201ENST00000247295 RILPL2Q969X0 211 aa14.07□□□□□ -0.16
FAM78A-201ENST00000247295 PANK1Q8TE04 598 aa14.07□□□□□ -0.16
FAM78A-201ENST00000247295 FYCO1Q9BQS8 1478 aa14.06□□□□□ -0.16
FAM78A-201ENST00000247295 CUX1P39880 1505 aa14.05□□□□□ -0.16
FAM78A-201ENST00000247295 MTHFSP49914 203 aa14.05□□□□□ -0.16
FAM78A-201ENST00000247295 RBM10P98175 930 aaKnown RBP14.05□□□□□ -0.16
FAM78A-201ENST00000247295 GNL2Q13823 731 aaKnown RBP14.05□□□□□ -0.16
FAM78A-201ENST00000247295 TAF7LQ5H9L4 462 aa14.05□□□□□ -0.16
FAM78A-201ENST00000247295 DDX49Q9Y6V7 483 aaKnown RBP14.05□□□□□ -0.16
FAM78A-201ENST00000247295 PRG4Q92954 1404 aaPredicted RBP14.04□□□□□ -0.16
FAM78A-201ENST00000247295 DZIP1LQ8IYY4 767 aaKnown RBP14.04□□□□□ -0.16
FAM78A-201ENST00000247295 TEFQ10587 303 aa14.04□□□□□ -0.16
FAM78A-201ENST00000247295 NUTM2GQ5VZR2 741 aa14.04□□□□□ -0.16
FAM78A-201ENST00000247295 ZNF771Q7L3S4 317 aaPredicted RBP14.04□□□□□ -0.16
FAM78A-201ENST00000247295 RUNDC1Q96C34 613 aa14.03□□□□□ -0.16
FAM78A-201ENST00000247295 ERICH3Q5RHP9 1530 aa14.02□□□□□ -0.16
FAM78A-201ENST00000247295 LNPKQ9C0E8 428 aa14.02□□□□□ -0.16
FAM78A-201ENST00000247295 R3HCC1Q9Y3T6 440 aaKnown RBP14.02□□□□□ -0.16
FAM78A-201ENST00000247295 SLC12A5Q9H2X9 1139 aa14.02□□□□□ -0.17
FAM78A-201ENST00000247295 GRIN2BQ13224 1484 aa14.02□□□□□ -0.17
FAM78A-201ENST00000247295 DDX11L8A8MPP1 907 aa14.02□□□□□ -0.17
FAM78A-201ENST00000247295 CHMP4AQ9BY43 222 aa14.02□□□□□ -0.17
FAM78A-201ENST00000247295 TCP11L2Q8N4U5 519 aa14.01□□□□□ -0.17
FAM78A-201ENST00000247295 NRDCO43847 1150 aa14□□□□□ -0.17
FAM78A-201ENST00000247295 PTMSP20962 102 aa14□□□□□ -0.17
FAM78A-201ENST00000247295 GPATCH3Q96I76 525 aa14□□□□□ -0.17
FAM78A-201ENST00000247295 HSP90B1P14625 803 aaKnown RBP14□□□□□ -0.17
FAM78A-201ENST00000247295 POLA1P09884 1462 aaPredicted RBP14□□□□□ -0.17
FAM78A-201ENST00000247295 DDX19BQ9UMR2 479 aa14□□□□□ -0.17
FAM78A-201ENST00000247295 GOLGA6L6A8MZA4 724 aa13.99□□□□□ -0.17
FAM78A-201ENST00000247295 ST18O60284 1047 aa13.99□□□□□ -0.17
FAM78A-201ENST00000247295 PPP2R1AP30153 589 aa13.98□□□□□ -0.17
FAM78A-201ENST00000247295 FKBP5Q13451 457 aaPredicted RBP13.98□□□□□ -0.17
FAM78A-201ENST00000247295 C1orf141Q5JVX7 400 aa13.98□□□□□ -0.17
FAM78A-201ENST00000247295 ZMYND15Q9H091 742 aa13.98□□□□□ -0.17
FAM78A-201ENST00000247295 HDAC5Q9UQL6 1122 aa13.97□□□□□ -0.17
FAM78A-201ENST00000247295 ARHGAP5Q13017 1502 aa13.97□□□□□ -0.17
FAM78A-201ENST00000247295 TOPBP1Q92547 1522 aa13.97□□□□□ -0.17
FAM78A-201ENST00000247295 TOMM22Q9NS69 142 aa13.97□□□□□ -0.17
FAM78A-201ENST00000247295 BRD4O60885 1362 aaPredicted RBP13.96□□□□□ -0.18
FAM78A-201ENST00000247295 PSME1Q06323 249 aa13.96□□□□□ -0.18
FAM78A-201ENST00000247295 AKNAQ7Z591 1439 aa13.96□□□□□ -0.18
FAM78A-201ENST00000247295 C9orf78Q9NZ63 289 aaPredicted RBP13.95□□□□□ -0.18
FAM78A-201ENST00000247295 MIA2Q96PC5 1412 aa13.95□□□□□ -0.18
FAM78A-201ENST00000247295 GTF2E1P29083 439 aaPredicted RBP13.95□□□□□ -0.18
FAM78A-201ENST00000247295 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.95□□□□□ -0.18
FAM78A-201ENST00000247295 HFM1A2PYH4 1435 aa13.95□□□□□ -0.18
FAM78A-201ENST00000247295 PNISRQ8TF01 805 aaKnown RBP13.95□□□□□ -0.18
FAM78A-201ENST00000247295 BCL11BQ9C0K0 894 aaPredicted RBP13.95□□□□□ -0.18
FAM78A-201ENST00000247295 TOP2BQ02880 1626 aa13.94□□□□□ -0.18
FAM78A-201ENST00000247295 C9orf84Q5VXU9 1444 aa13.94□□□□□ -0.18
FAM78A-201ENST00000247295 WDR97A6NE52 1622 aa13.94□□□□□ -0.18
FAM78A-201ENST00000247295 BCAR3O75815 825 aa13.94□□□□□ -0.18
FAM78A-201ENST00000247295 RAPGEF3O95398 923 aa13.94□□□□□ -0.18
FAM78A-201ENST00000247295 SYAP1Q96A49 352 aaPredicted RBP13.94□□□□□ -0.18
FAM78A-201ENST00000247295 PRAM1Q96QH2 718 aa13.94□□□□□ -0.18
FAM78A-201ENST00000247295 SCAPERQ9BY12 1400 aa13.94□□□□□ -0.18
FAM78A-201ENST00000247295 TSR2Q969E8 191 aaKnown RBP13.93□□□□□ -0.18
FAM78A-201ENST00000247295 API5Q9BZZ5 524 aaKnown RBP13.93□□□□□ -0.18
FAM78A-201ENST00000247295 TSPYL4Q9UJ04 414 aa13.93□□□□□ -0.18
FAM78A-201ENST00000247295 NLRP6P59044 892 aa13.93□□□□□ -0.18
FAM78A-201ENST00000247295 KIF16BQ96L93 1317 aa13.93□□□□□ -0.18
FAM78A-201ENST00000247295 SYNJ2O15056 1496 aa13.93□□□□□ -0.18
FAM78A-201ENST00000247295 MRE11P49959 708 aa13.93□□□□□ -0.18
FAM78A-201ENST00000247295 KIAA1107Q9UPP5 1409 aa13.92□□□□□ -0.18
FAM78A-201ENST00000247295 C11orf95C9JLR9 678 aaPredicted RBP13.92□□□□□ -0.18
FAM78A-201ENST00000247295 MAPK8IP2Q13387 824 aaPredicted RBP13.92□□□□□ -0.18
FAM78A-201ENST00000247295 RRP9O43818 475 aaKnown RBP13.92□□□□□ -0.18
FAM78A-201ENST00000247295 PRKAR2BP31323 418 aa13.92□□□□□ -0.18
FAM78A-201ENST00000247295 STAC3Q96MF2 364 aa13.92□□□□□ -0.18
FAM78A-201ENST00000247295 CHMP5Q9NZZ3 219 aa13.92□□□□□ -0.18
FAM78A-201ENST00000247295 EXOSC9Q06265 439 aaKnown RBP13.91□□□□□ -0.18
FAM78A-201ENST00000247295 GNAI1P63096 354 aa13.91□□□□□ -0.18
FAM78A-201ENST00000247295 ANO2Q9NQ90 1003 aa13.91□□□□□ -0.18
FAM78A-201ENST00000247295 TIAM1Q13009 1591 aa13.91□□□□□ -0.18
FAM78A-201ENST00000247295 TXNDC2Q86VQ3 553 aa13.91□□□□□ -0.18
FAM78A-201ENST00000247295 TROQ12816 1431 aaPredicted RBP13.91□□□□□ -0.18
FAM78A-201ENST00000247295 DIAPH3Q9NSV4 1193 aa13.9□□□□□ -0.18
FAM78A-201ENST00000247295 TRAK2O60296 914 aa13.9□□□□□ -0.18
FAM78A-201ENST00000247295 CDK13Q14004 1512 aaKnown RBP13.9□□□□□ -0.18
FAM78A-201ENST00000247295 NAIPQ13075 1403 aa13.9□□□□□ -0.18
FAM78A-201ENST00000247295 SKOR2Q2VWA4 1001 aaPredicted RBP13.9□□□□□ -0.18
FAM78A-201ENST00000247295 TTC5Q8N0Z6 440 aa13.9□□□□□ -0.18
FAM78A-201ENST00000247295 EVA1CP58658 441 aa13.9□□□□□ -0.19
FAM78A-201ENST00000247295 NEXNQ0ZGT2 675 aa13.9□□□□□ -0.19
FAM78A-201ENST00000247295 SYTL4Q96C24 671 aaPredicted RBP13.9□□□□□ -0.19
FAM78A-201ENST00000247295 BACH2Q9BYV9 841 aa13.9□□□□□ -0.19
FAM78A-201ENST00000247295 AIMP1Q12904 312 aaKnown RBP13.89□□□□□ -0.19
FAM78A-201ENST00000247295 ZNF428Q96B54 188 aa13.89□□□□□ -0.19
FAM78A-201ENST00000247295 C1orf115Q9H7X2 142 aa13.89□□□□□ -0.19
FAM78A-201ENST00000247295 HTATSF1O43719 755 aaKnown RBP13.88□□□□□ -0.19
FAM78A-201ENST00000247295 CABP1Q9NZU7 370 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms