RNA–Protein interactions for RNA: ENST00000246868.6

SBDS-201, Transcript of SBDS, ribosome maturation factor, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SBDS, Length 1,631 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDS-201ENST00000246868 UBR1Q8IWV7 1749 aa27.29■■□□□ 1.96
SBDS-201ENST00000246868 NEXMIFQ5QGS0 1516 aa27.28■■□□□ 1.96
SBDS-201ENST00000246868 VGFO15240 615 aaPredicted RBP27.28■■□□□ 1.96
SBDS-201ENST00000246868 RALGAPBQ86X10 1494 aa27.24■■□□□ 1.95
SBDS-201ENST00000246868 HDGFP51858 240 aaKnown RBP27.24■■□□□ 1.95
SBDS-201ENST00000246868 KDM4FA0A1W2PPD8 638 aa27.23■■□□□ 1.95
SBDS-201ENST00000246868 CEP170BQ9Y4F5 1589 aaPredicted RBP27.23■■□□□ 1.95
SBDS-201ENST00000246868 ADGRF5Q8IZF2 1346 aa27.23■■□□□ 1.95
SBDS-201ENST00000246868 ZFYVE9O95405 1425 aa27.22■■□□□ 1.95
SBDS-201ENST00000246868 RIMS2Q9UQ26 1411 aa27.22■■□□□ 1.95
SBDS-201ENST00000246868 THEMISQ8N1K5 641 aaPredicted RBP27.22■■□□□ 1.95
SBDS-201ENST00000246868 ABCF1Q8NE71 845 aaKnown RBP eCLIP27.22■■□□□ 1.95
SBDS-201ENST00000246868 NRXN1Q9ULB1 1477 aa27.22■■□□□ 1.95
SBDS-201ENST00000246868 TRPM1Q7Z4N2 1603 aa27.21■■□□□ 1.95
SBDS-201ENST00000246868 ZNF142P52746 1687 aaPredicted RBP27.2■■□□□ 1.94
SBDS-201ENST00000246868 TMEM2Q9UHN6 1383 aa27.2■■□□□ 1.94
SBDS-201ENST00000246868 NUTM2DQ5VT03 806 aaPredicted RBP27.19■■□□□ 1.94
SBDS-201ENST00000246868 ROCK2O75116 1388 aaKnown RBP27.19■■□□□ 1.94
SBDS-201ENST00000246868 KIAA1210Q9ULL0 1709 aa27.17■■□□□ 1.94
SBDS-201ENST00000246868 PIK3C2GO75747 1445 aa27.17■■□□□ 1.94
SBDS-201ENST00000246868 CARD11Q9BXL7 1154 aa27.15■■□□□ 1.94
SBDS-201ENST00000246868 EID1Q9Y6B2 187 aa27.14■■□□□ 1.94
SBDS-201ENST00000246868 SLIT1O75093 1534 aa27.13■■□□□ 1.93
SBDS-201ENST00000246868 ARHGAP23Q9P227 1491 aa27.11■■□□□ 1.93
SBDS-201ENST00000246868 GPRASP1Q5JY77 1395 aa27.11■■□□□ 1.93
SBDS-201ENST00000246868 EIF4G2P78344 907 aaKnown RBP eCLIP27.11■■□□□ 1.93
SBDS-201ENST00000246868 NBPF1Q3BBV0 1214 aa27.11■■□□□ 1.93
SBDS-201ENST00000246868 CFAP70Q5T0N1 1121 aa27.1■■□□□ 1.93
SBDS-201ENST00000246868 LAMC1P11047 1609 aa27.1■■□□□ 1.93
SBDS-201ENST00000246868 C14orf93Q9H972 538 aaKnown RBP27.09■■□□□ 1.93
SBDS-201ENST00000246868 TXNDC2Q86VQ3 553 aa27.08■■□□□ 1.93
SBDS-201ENST00000246868 ZNF316A6NFI3 1004 aaPredicted RBP27.06■■□□□ 1.92
SBDS-201ENST00000246868 USP47Q96K76 1375 aa27.06■■□□□ 1.92
SBDS-201ENST00000246868 SETBP1Q9Y6X0 1596 aa27.05■■□□□ 1.92
SBDS-201ENST00000246868 LTKP29376 864 aa27.04■■□□□ 1.92
SBDS-201ENST00000246868 BCANQ96GW7 911 aa27.04■■□□□ 1.92
SBDS-201ENST00000246868 SCAF11Q99590 1463 aaKnown RBP27.03■■□□□ 1.92
SBDS-201ENST00000246868 HSPA5P11021 654 aaKnown RBP27.03■■□□□ 1.92
SBDS-201ENST00000246868 PLEKHG1Q9ULL1 1385 aa27.03■■□□□ 1.92
SBDS-201ENST00000246868 ANKLE2Q86XL3 938 aa27.01■■□□□ 1.92
SBDS-201ENST00000246868 SENP3Q9H4L4 574 aaPredicted RBP27.01■■□□□ 1.92
SBDS-201ENST00000246868 ALKQ9UM73 1620 aa27.01■■□□□ 1.91
SBDS-201ENST00000246868 IQGAP1P46940 1657 aa26.97■■□□□ 1.91
SBDS-201ENST00000246868 ADGRB1O14514 1584 aa26.97■■□□□ 1.91
SBDS-201ENST00000246868 HIRIP3Q9BW71 556 aaPredicted RBP26.97■■□□□ 1.91
SBDS-201ENST00000246868 NRXN3Q9Y4C0 1643 aa26.96■■□□□ 1.91
SBDS-201ENST00000246868 EIF3AQ14152 1382 aaKnown RBP26.96■■□□□ 1.91
SBDS-201ENST00000246868 TMEM132EQ6IEE7 984 aa26.95■■□□□ 1.91
SBDS-201ENST00000246868 SETD1AO15047 1707 aaKnown RBP26.91■■□□□ 1.9
SBDS-201ENST00000246868 POLR1AO95602 1720 aaPredicted RBP26.91■■□□□ 1.9
SBDS-201ENST00000246868 ST20-MTHFSA0A0A6YYL1 179 aa26.9■■□□□ 1.9
SBDS-201ENST00000246868 ADAMTS13Q76LX8 1427 aa26.9■■□□□ 1.9
SBDS-201ENST00000246868 ASXL1Q8IXJ9 1541 aa26.9■■□□□ 1.9
SBDS-201ENST00000246868 DIP2AQ14689 1571 aa26.89■■□□□ 1.9
SBDS-201ENST00000246868 LMTK3Q96Q04 1460 aa26.88■■□□□ 1.89
SBDS-201ENST00000246868 YTHDC2Q9H6S0 1430 aaKnown RBP26.88■■□□□ 1.89
SBDS-201ENST00000246868 TRAK1Q9UPV9 953 aa26.87■■□□□ 1.89
SBDS-201ENST00000246868 TBX22Q9Y458 520 aa26.87■■□□□ 1.89
SBDS-201ENST00000246868 MED14O60244 1454 aa26.86■■□□□ 1.89
SBDS-201ENST00000246868 SLC26A8Q96RN1 970 aa26.86■■□□□ 1.89
SBDS-201ENST00000246868 STK26Q9P289 416 aa26.85■■□□□ 1.89
SBDS-201ENST00000246868 METP08581 1390 aa26.85■■□□□ 1.89
SBDS-201ENST00000246868 NPHP4O75161 1426 aaPredicted RBP26.85■■□□□ 1.89
SBDS-201ENST00000246868 LRPPRCP42704 1394 aaKnown RBP26.84■■□□□ 1.89
SBDS-201ENST00000246868 HSPA2P54652 639 aa26.83■■□□□ 1.88
SBDS-201ENST00000246868 NCKAP5LQ9HCH0 1330 aa26.83■■□□□ 1.88
SBDS-201ENST00000246868 SLC24A1O60721 1099 aa26.81■■□□□ 1.88
SBDS-201ENST00000246868 ARHGEF28Q8N1W1 1705 aaKnown RBP26.8■■□□□ 1.88
SBDS-201ENST00000246868 CENPJQ9HC77 1338 aaPredicted RBP26.8■■□□□ 1.88
SBDS-201ENST00000246868 ABCC11Q96J66 1382 aa26.8■■□□□ 1.88
SBDS-201ENST00000246868 PIK3R4Q99570 1358 aa26.78■■□□□ 1.88
SBDS-201ENST00000246868 TESK2Q96S53 571 aa26.77■■□□□ 1.88
SBDS-201ENST00000246868 DLC1Q96QB1 1528 aa26.77■■□□□ 1.88
SBDS-201ENST00000246868 KNDC1Q76NI1 1749 aa26.76■■□□□ 1.87
SBDS-201ENST00000246868 POGKQ9P215 609 aa26.76■■□□□ 1.87
SBDS-201ENST00000246868 TMF1P82094 1093 aa26.75■■□□□ 1.87
SBDS-201ENST00000246868 TECPR2O15040 1411 aa26.74■■□□□ 1.87
SBDS-201ENST00000246868 QRICH2Q9H0J4 1663 aa26.74■■□□□ 1.87
SBDS-201ENST00000246868 SBNO2Q9Y2G9 1366 aa26.74■■□□□ 1.87
SBDS-201ENST00000246868 PRAM1Q96QH2 718 aa26.73■■□□□ 1.87
SBDS-201ENST00000246868 SIRT1Q96EB6 747 aa26.72■■□□□ 1.87
SBDS-201ENST00000246868 CCDC7Q96M83 1385 aa26.72■■□□□ 1.87
SBDS-201ENST00000246868 WASHC2AQ641Q2 1341 aa26.71■■□□□ 1.87
SBDS-201ENST00000246868 CPS1P31327 1500 aa26.71■■□□□ 1.87
SBDS-201ENST00000246868 AMOTL2Q9Y2J4 779 aa26.71■■□□□ 1.87
SBDS-201ENST00000246868 C11orf95C9JLR9 678 aaPredicted RBP26.7■■□□□ 1.86
SBDS-201ENST00000246868 FAM135BQ49AJ0 1406 aa26.7■■□□□ 1.86
SBDS-201ENST00000246868 KIF7Q2M1P5 1343 aa26.7■■□□□ 1.86
SBDS-201ENST00000246868 CDCA8Q53HL2 280 aa26.69■■□□□ 1.86
SBDS-201ENST00000246868 PTPRUQ92729 1446 aa26.69■■□□□ 1.86
SBDS-201ENST00000246868 SAFB2Q14151 953 aaKnown RBP eCLIP26.68■■□□□ 1.86
SBDS-201ENST00000246868 POLR3GLQ9BT43 218 aa26.67■■□□□ 1.86
SBDS-201ENST00000246868 DISP3Q9P2K9 1392 aa26.66■■□□□ 1.86
SBDS-201ENST00000246868 STRCQ7RTU9 1775 aa26.66■■□□□ 1.86
SBDS-201ENST00000246868 CHD2O14647 1828 aaKnown RBP26.66■■□□□ 1.86
SBDS-201ENST00000246868 XRN1Q8IZH2 1706 aaKnown RBP26.66■■□□□ 1.86
SBDS-201ENST00000246868 PTCH1Q13635 1447 aa26.66■■□□□ 1.86
SBDS-201ENST00000246868 WAPLQ7Z5K2 1190 aa26.65■■□□□ 1.86
SBDS-201ENST00000246868 ROBO2Q9HCK4 1378 aa26.64■■□□□ 1.86
SBDS-201ENST00000246868 DDX10Q13206 875 aaKnown RBP26.62■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms