RNA–Protein interactions for RNA: ENST00000238961.8

SLF2-201, Transcript of SMC5-SMC6 complex localization factor 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SLF2, Length 7,288 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLF2-201ENST00000238961 ATP6V1DQ9Y5K8 247 aa12.51□□□□□ -0.41
SLF2-201ENST00000238961 SPDYE4A6NLX3 237 aa12.5□□□□□ -0.41
SLF2-201ENST00000238961 SMC4Q9NTJ3 1288 aa12.5□□□□□ -0.41
SLF2-201ENST00000238961 TRDNQ13061 729 aa12.5□□□□□ -0.41
SLF2-201ENST00000238961 EIF4G1Q04637 1599 aaKnown RBP12.5□□□□□ -0.41
SLF2-201ENST00000238961 CLASRPQ8N2M8 674 aaKnown RBP12.5□□□□□ -0.41
SLF2-201ENST00000238961 NGDNQ8NEJ9 315 aaKnown RBP12.5□□□□□ -0.41
SLF2-201ENST00000238961 PMFBP1Q8TBY8 1022 aa12.5□□□□□ -0.41
SLF2-201ENST00000238961 FOSBP53539 338 aa12.49□□□□□ -0.41
SLF2-201ENST00000238961 HSP90AB4PQ58FF6 505 aa12.49□□□□□ -0.41
SLF2-201ENST00000238961 ARGLU1Q9NWB6 273 aaPredicted RBP12.49□□□□□ -0.41
SLF2-201ENST00000238961 MROH2BQ7Z745 1585 aa12.49□□□□□ -0.41
SLF2-201ENST00000238961 PDCL3Q9H2J4 239 aa12.49□□□□□ -0.41
SLF2-201ENST00000238961 NF2P35240 595 aa12.49□□□□□ -0.41
SLF2-201ENST00000238961 GRIPAP1Q4V328 841 aa12.48□□□□□ -0.41
SLF2-201ENST00000238961 BICD2Q8TD16 824 aa12.48□□□□□ -0.41
SLF2-201ENST00000238961 PDILTQ8N807 584 aa12.48□□□□□ -0.41
SLF2-201ENST00000238961 LMOD3Q0VAK6 560 aa12.47□□□□□ -0.41
SLF2-201ENST00000238961 DYDC1Q8WWB3 177 aa12.47□□□□□ -0.41
SLF2-201ENST00000238961 CCDC27Q2M243 656 aa12.46□□□□□ -0.41
SLF2-201ENST00000238961 SAFBQ15424 915 aaKnown RBP eCLIP12.46□□□□□ -0.41
SLF2-201ENST00000238961 DDX49Q9Y6V7 483 aaKnown RBP12.46□□□□□ -0.41
SLF2-201ENST00000238961 ERLIN2O94905 339 aa12.46□□□□□ -0.42
SLF2-201ENST00000238961 C1orf141Q5JVX7 400 aa12.46□□□□□ -0.42
SLF2-201ENST00000238961 DCAF11Q8TEB1 546 aa12.46□□□□□ -0.42
SLF2-201ENST00000238961 DIAPH3Q9NSV4 1193 aa12.46□□□□□ -0.42
SLF2-201ENST00000238961 TMEM87AQ8NBN3 555 aa12.45□□□□□ -0.42
SLF2-201ENST00000238961 ANO2Q9NQ90 1003 aa12.45□□□□□ -0.42
SLF2-201ENST00000238961 ABCC8Q09428 1581 aa12.44□□□□□ -0.42
SLF2-201ENST00000238961 GGT6Q6P531 493 aa12.44□□□□□ -0.42
SLF2-201ENST00000238961 ERCC4Q92889 916 aaPredicted RBP12.44□□□□□ -0.42
SLF2-201ENST00000238961 CWC15Q9P013 229 aaKnown RBP12.44□□□□□ -0.42
SLF2-201ENST00000238961 TAX1BP1Q86VP1 789 aa12.44□□□□□ -0.42
SLF2-201ENST00000238961 AXDND1Q5T1B0 1012 aaPredicted RBP12.44□□□□□ -0.42
SLF2-201ENST00000238961 BRMS1Q9HCU9 246 aa12.44□□□□□ -0.42
SLF2-201ENST00000238961 KDM4AO75164 1064 aa12.43□□□□□ -0.42
SLF2-201ENST00000238961 TTC5Q8N0Z6 440 aa12.43□□□□□ -0.42
SLF2-201ENST00000238961 DDX11L8A8MPP1 907 aa12.43□□□□□ -0.42
SLF2-201ENST00000238961 GBP2P32456 591 aaPredicted RBP12.43□□□□□ -0.42
SLF2-201ENST00000238961 SASS6Q6UVJ0 657 aa12.43□□□□□ -0.42
SLF2-201ENST00000238961 CDK5RAP3Q96JB5 506 aa12.43□□□□□ -0.42
SLF2-201ENST00000238961 DDX23Q9BUQ8 820 aaKnown RBP12.43□□□□□ -0.42
SLF2-201ENST00000238961 GOLGA6L7A0A1B0GV03 622 aa12.43□□□□□ -0.42
SLF2-201ENST00000238961 KRT18P05783 430 aaKnown RBP12.43□□□□□ -0.42
SLF2-201ENST00000238961 NUTM2FA1L443 756 aa12.43□□□□□ -0.42
SLF2-201ENST00000238961 CLUAP1Q96AJ1 413 aa12.42□□□□□ -0.42
SLF2-201ENST00000238961 INCENPQ9NQS7 918 aa12.42□□□□□ -0.42
SLF2-201ENST00000238961 OLFM4Q6UX06 510 aa12.42□□□□□ -0.42
SLF2-201ENST00000238961 FAM13BQ9NYF5 915 aa12.42□□□□□ -0.42
SLF2-201ENST00000238961 IFT57Q9NWB7 429 aa12.42□□□□□ -0.42
SLF2-201ENST00000238961 CCDC112Q8NEF3 446 aa12.42□□□□□ -0.42
SLF2-201ENST00000238961 WRNQ14191 1432 aaPredicted RBP eCLIP12.41□□□□□ -0.42
SLF2-201ENST00000238961 CT47B1P0C2W7 299 aaPredicted RBP12.41□□□□□ -0.42
SLF2-201ENST00000238961 MATR3P43243 847 aaKnown RBP eCLIP12.41□□□□□ -0.422e-8■□□□□ 9.1
SLF2-201ENST00000238961 EID1Q9Y6B2 187 aa12.41□□□□□ -0.42
SLF2-201ENST00000238961 DESP17661 470 aa12.41□□□□□ -0.42
SLF2-201ENST00000238961 GOLGA6L10A6NI86 522 aa12.4□□□□□ -0.42
SLF2-201ENST00000238961 CBX1P83916 185 aa12.4□□□□□ -0.42
SLF2-201ENST00000238961 PSMD1Q99460 953 aa12.4□□□□□ -0.42
SLF2-201ENST00000238961 C9orf78Q9NZ63 289 aaPredicted RBP12.4□□□□□ -0.42
SLF2-201ENST00000238961 PDS5BQ9NTI5 1447 aa12.4□□□□□ -0.42
SLF2-201ENST00000238961 MPHOSPH10O00566 681 aaKnown RBP12.4□□□□□ -0.43
SLF2-201ENST00000238961 ZKSCAN1P17029 563 aaPredicted RBP12.4□□□□□ -0.43
SLF2-201ENST00000238961 RUFY2Q8WXA3 655 aa12.4□□□□□ -0.43
SLF2-201ENST00000238961 IPO9Q96P70 1041 aaKnown RBP12.4□□□□□ -0.43
SLF2-201ENST00000238961 CHMP5Q9NZZ3 219 aa12.4□□□□□ -0.43
SLF2-201ENST00000238961 PLCD3Q8N3E9 789 aa12.39□□□□□ -0.43
SLF2-201ENST00000238961 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.39□□□□□ -0.43
SLF2-201ENST00000238961 CEP63Q96MT8 703 aa12.39□□□□□ -0.43
SLF2-201ENST00000238961 PUS7Q96PZ0 661 aaKnown RBP12.39□□□□□ -0.43
SLF2-201ENST00000238961 MAGEC2Q9UBF1 373 aaPredicted RBP12.39□□□□□ -0.43
SLF2-201ENST00000238961 SMARCA2P51531 1590 aa12.38□□□□□ -0.43
SLF2-201ENST00000238961 KIF27Q86VH2 1401 aa12.38□□□□□ -0.43
SLF2-201ENST00000238961 STAMBPO95630 424 aa12.38□□□□□ -0.43
SLF2-201ENST00000238961 XBP1P17861 261 aa12.38□□□□□ -0.43
SLF2-201ENST00000238961 BRPF1P55201 1214 aaPredicted RBP12.38□□□□□ -0.43
SLF2-201ENST00000238961 CENPHQ9H3R5 247 aa12.38□□□□□ -0.43
SLF2-201ENST00000238961 ATP2B2Q01814 1243 aa12.37□□□□□ -0.43
SLF2-201ENST00000238961 CLIP1P30622 1438 aa12.37□□□□□ -0.43
SLF2-201ENST00000238961 IFIT2P09913 472 aaKnown RBP12.37□□□□□ -0.43
SLF2-201ENST00000238961 EIF2S2P20042 333 aaKnown RBP12.37□□□□□ -0.43
SLF2-201ENST00000238961 KIAA0754O94854 1291 aa12.37□□□□□ -0.43
SLF2-201ENST00000238961 TRIM21P19474 475 aaKnown RBP12.36□□□□□ -0.43
SLF2-201ENST00000238961 CCDC88BA6NC98 1476 aa12.36□□□□□ -0.43
SLF2-201ENST00000238961 VPS37CA5D8V6 355 aaPredicted RBP12.36□□□□□ -0.43
SLF2-201ENST00000238961 LEKR1Q6ZMV7 388 aa12.36□□□□□ -0.43
SLF2-201ENST00000238961 CCDC73Q6ZRK6 1079 aa12.36□□□□□ -0.43
SLF2-201ENST00000238961 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.36□□□□□ -0.43
SLF2-201ENST00000238961 ZHX3Q9H4I2 956 aa12.36□□□□□ -0.43
SLF2-201ENST00000238961 CEP162Q5TB80 1403 aa12.36□□□□□ -0.43
SLF2-201ENST00000238961 SF3B2Q13435 895 aaKnown RBP12.36□□□□□ -0.43
SLF2-201ENST00000238961 PPM1EQ8WY54 764 aa12.36□□□□□ -0.43
SLF2-201ENST00000238961 COMMD10Q9Y6G5 202 aa12.36□□□□□ -0.43
SLF2-201ENST00000238961 ANKRD45Q5TZF3 282 aa12.36□□□□□ -0.43
SLF2-201ENST00000238961 GOLGA6L10A0A0M3HER8 536 aa12.35□□□□□ -0.43
SLF2-201ENST00000238961 CHMP4BP1P59074 171 aa12.35□□□□□ -0.43
SLF2-201ENST00000238961 ANAPC15P60006 121 aa12.35□□□□□ -0.43
SLF2-201ENST00000238961 RSPH4AQ5TD94 716 aa12.35□□□□□ -0.43
SLF2-201ENST00000238961 TEFQ10587 303 aa12.35□□□□□ -0.43
SLF2-201ENST00000238961 CCDC181Q5TID7 509 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms