RNA–Protein interactions for RNA: ENST00000238616.9

NEK9-201, Transcript of NIMA related kinase 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEK9, Length 8,310 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-201ENST00000238616 TTLL5Q6EMB2 1281 aa16.13■□□□□ 0.17
NEK9-201ENST00000238616 WASHC2CQ9Y4E1 1318 aa16.13■□□□□ 0.17
NEK9-201ENST00000238616 LMOD3Q0VAK6 560 aa16.13■□□□□ 0.17
NEK9-201ENST00000238616 CENPJQ9HC77 1338 aaPredicted RBP16.13■□□□□ 0.17
NEK9-201ENST00000238616 TEFQ10587 303 aa16.13■□□□□ 0.17
NEK9-201ENST00000238616 ARHGAP35Q9NRY4 1499 aa16.13■□□□□ 0.17
NEK9-201ENST00000238616 CPLX2Q6PUV4 134 aaKnown RBP16.11■□□□□ 0.17
NEK9-201ENST00000238616 PSME1Q06323 249 aa16.11■□□□□ 0.17
NEK9-201ENST00000238616 HSP90AA2PQ14568 343 aaPredicted RBP16.11■□□□□ 0.17
NEK9-201ENST00000238616 TRAK1Q9UPV9 953 aa16.11■□□□□ 0.17
NEK9-201ENST00000238616 KIF3BO15066 747 aa16.1■□□□□ 0.17
NEK9-201ENST00000238616 DDX49Q9Y6V7 483 aaKnown RBP16.1■□□□□ 0.17
NEK9-201ENST00000238616 IBSPP21815 317 aaPredicted RBP16.09■□□□□ 0.17
NEK9-201ENST00000238616 BICD2Q8TD16 824 aa16.09■□□□□ 0.17
NEK9-201ENST00000238616 ATP6V1DQ9Y5K8 247 aa16.09■□□□□ 0.17
NEK9-201ENST00000238616 PPM1FP49593 454 aaPredicted RBP16.09■□□□□ 0.17
NEK9-201ENST00000238616 AK7Q96M32 723 aa16.08■□□□□ 0.16
NEK9-201ENST00000238616 FHAD1B1AJZ9 1412 aa16.08■□□□□ 0.16
NEK9-201ENST00000238616 IFIT2P09913 472 aaKnown RBP16.07■□□□□ 0.16
NEK9-201ENST00000238616 NUP155O75694 1391 aa16.07■□□□□ 0.16
NEK9-201ENST00000238616 CCDC97Q96F63 343 aaPredicted RBP16.07■□□□□ 0.16
NEK9-201ENST00000238616 DDX11L8A8MPP1 907 aa16.06■□□□□ 0.16
NEK9-201ENST00000238616 TEX35Q5T0J7 233 aa16.06■□□□□ 0.16
NEK9-201ENST00000238616 OFD1O75665 1012 aa16.06■□□□□ 0.16
NEK9-201ENST00000238616 CEP164Q9UPV0 1460 aa16.06■□□□□ 0.16
NEK9-201ENST00000238616 FAM177BA6PVY3 158 aa16.05■□□□□ 0.16
NEK9-201ENST00000238616 ATP2B2Q01814 1243 aa16.05■□□□□ 0.16
NEK9-201ENST00000238616 CAGE1Q8TC20 777 aa16.05■□□□□ 0.16
NEK9-201ENST00000238616 PDILTQ8N807 584 aa16.05■□□□□ 0.16
NEK9-201ENST00000238616 COG3Q96JB2 828 aa16.04■□□□□ 0.16
NEK9-201ENST00000238616 CFAP65Q6ZU64 1925 aaKnown RBP16.04■□□□□ 0.16
NEK9-201ENST00000238616 RALBP1Q15311 655 aa16.04■□□□□ 0.16
NEK9-201ENST00000238616 PLCD4Q9BRC7 762 aa16.04■□□□□ 0.16
NEK9-201ENST00000238616 SETD1BQ9UPS6 1966 aaKnown RBP16.03■□□□□ 0.16
NEK9-201ENST00000238616 WRNQ14191 1432 aaPredicted RBP eCLIP16.03■□□□□ 0.16
NEK9-201ENST00000238616 AIMP1Q12904 312 aaKnown RBP16.03■□□□□ 0.16
NEK9-201ENST00000238616 DHX37Q8IY37 1157 aaKnown RBP16.03■□□□□ 0.16
NEK9-201ENST00000238616 HNRNPMP52272 730 aaKnown RBP eCLIP16.03■□□□□ 0.16
NEK9-201ENST00000238616 NEFHP12036 1026 aa16.03■□□□□ 0.16
NEK9-201ENST00000238616 ZKSCAN1P17029 563 aaPredicted RBP16.03■□□□□ 0.16
NEK9-201ENST00000238616 RUFY2Q8WXA3 655 aa16.02■□□□□ 0.16
NEK9-201ENST00000238616 MYO15BQ96JP2 1530 aa16.02■□□□□ 0.15
NEK9-201ENST00000238616 VPS37CA5D8V6 355 aaPredicted RBP16.02■□□□□ 0.15
NEK9-201ENST00000238616 ANKRD62A6NC57 917 aa16.02■□□□□ 0.15
NEK9-201ENST00000238616 NEUROD6Q96NK8 337 aa16.02■□□□□ 0.15
NEK9-201ENST00000238616 SAFBQ15424 915 aaKnown RBP eCLIP16.01■□□□□ 0.15
NEK9-201ENST00000238616 SASS6Q6UVJ0 657 aa16.01■□□□□ 0.15
NEK9-201ENST00000238616 CHMP4CQ96CF2 233 aa16.01■□□□□ 0.15
NEK9-201ENST00000238616 CCDC173Q0VFZ6 552 aa16.01■□□□□ 0.15
NEK9-201ENST00000238616 STK11IPQ8N1F8 1099 aa16.01■□□□□ 0.15
NEK9-201ENST00000238616 ZNF428Q96B54 188 aa16■□□□□ 0.15
NEK9-201ENST00000238616 RDXP35241 583 aaKnown RBP16■□□□□ 0.15
NEK9-201ENST00000238616 WASHC4Q2M389 1173 aa15.99■□□□□ 0.15
NEK9-201ENST00000238616 BRMS1Q9HCU9 246 aa15.99■□□□□ 0.15
NEK9-201ENST00000238616 G3BP1Q13283 466 aaKnown RBP eCLIP15.99■□□□□ 0.152e-6■□□□□ 8.1
NEK9-201ENST00000238616 SYCP1Q15431 976 aa15.98■□□□□ 0.15
NEK9-201ENST00000238616 IPO9Q96P70 1041 aaKnown RBP15.98■□□□□ 0.15
NEK9-201ENST00000238616 BRPF1P55201 1214 aaPredicted RBP15.98■□□□□ 0.15
NEK9-201ENST00000238616 DDX58O95786 925 aaKnown RBP15.97■□□□□ 0.15
NEK9-201ENST00000238616 RALYLQ86SE5 291 aaKnown RBP15.97■□□□□ 0.15
NEK9-201ENST00000238616 IFT57Q9NWB7 429 aa15.97■□□□□ 0.15
NEK9-201ENST00000238616 EEA1Q15075 1411 aa15.97■□□□□ 0.15
NEK9-201ENST00000238616 CGNL1Q0VF96 1302 aa15.97■□□□□ 0.15
NEK9-201ENST00000238616 CDR1P51861 262 aa15.97■□□□□ 0.15
NEK9-201ENST00000238616 NUTM2GQ5VZR2 741 aa15.97■□□□□ 0.15
NEK9-201ENST00000238616 WDR70Q9NW82 654 aa15.97■□□□□ 0.15
NEK9-201ENST00000238616 SETD5Q9C0A6 1442 aa15.97■□□□□ 0.15
NEK9-201ENST00000238616 RNF20Q5VTR2 975 aa15.97■□□□□ 0.15
NEK9-201ENST00000238616 RIC3Q7Z5B4 369 aa15.97■□□□□ 0.15
NEK9-201ENST00000238616 CDK5RAP3Q96JB5 506 aa15.97■□□□□ 0.15
NEK9-201ENST00000238616 FAM13BQ9NYF5 915 aa15.96■□□□□ 0.15
NEK9-201ENST00000238616 CUX2O14529 1486 aa15.96■□□□□ 0.15
NEK9-201ENST00000238616 OLFM4Q6UX06 510 aa15.96■□□□□ 0.15
NEK9-201ENST00000238616 CARMIL2Q6F5E8 1435 aa15.96■□□□□ 0.15
NEK9-201ENST00000238616 SEPT7Q16181 437 aaKnown RBP15.95■□□□□ 0.14
NEK9-201ENST00000238616 MINK1Q8N4C8 1332 aaPredicted RBP15.95■□□□□ 0.14
NEK9-201ENST00000238616 MPHOSPH9Q99550 1183 aa15.95■□□□□ 0.14
NEK9-201ENST00000238616 ATF3P18847 181 aa15.95■□□□□ 0.14
NEK9-201ENST00000238616 MATR3P43243 847 aaKnown RBP eCLIP15.95■□□□□ 0.14
NEK9-201ENST00000238616 SF3B2Q13435 895 aaKnown RBP15.94■□□□□ 0.14
NEK9-201ENST00000238616 FKBP5Q13451 457 aaPredicted RBP15.94■□□□□ 0.14
NEK9-201ENST00000238616 RBM5P52756 815 aaKnown RBP eCLIP15.94■□□□□ 0.14
NEK9-201ENST00000238616 CCDC191Q8NCU4 936 aa15.94■□□□□ 0.14
NEK9-201ENST00000238616 H0YHG0 523 aa15.93■□□□□ 0.14
NEK9-201ENST00000238616 MYO6Q9UM54 1294 aa15.93■□□□□ 0.14
NEK9-201ENST00000238616 FAM161AQ3B820 660 aa15.93■□□□□ 0.14
NEK9-201ENST00000238616 SMC3Q9UQE7 1217 aa15.92■□□□□ 0.14
NEK9-201ENST00000238616 ENOX2Q16206 610 aaKnown RBP15.92■□□□□ 0.14
NEK9-201ENST00000238616 REC8O95072 547 aa15.92■□□□□ 0.14
NEK9-201ENST00000238616 XBP1P17861 261 aa15.92■□□□□ 0.14
NEK9-201ENST00000238616 KRT18P05783 430 aaKnown RBP15.92■□□□□ 0.14
NEK9-201ENST00000238616 ZRSR2Q15696 482 aaKnown RBP15.92■□□□□ 0.14
NEK9-201ENST00000238616 CHMP4BP1P59074 171 aa15.92■□□□□ 0.14
NEK9-201ENST00000238616 HSP90B2PQ58FF3 399 aa15.92■□□□□ 0.14
NEK9-201ENST00000238616 MNS1Q8NEH6 495 aa15.92■□□□□ 0.14
NEK9-201ENST00000238616 ATP2B1P20020 1258 aa15.92■□□□□ 0.14
NEK9-201ENST00000238616 ZHX3Q9H4I2 956 aa15.92■□□□□ 0.14
NEK9-201ENST00000238616 TIMELESSQ9UNS1 1208 aa15.91■□□□□ 0.14
NEK9-201ENST00000238616 NOM1Q5C9Z4 860 aaKnown RBP15.91■□□□□ 0.14
NEK9-201ENST00000238616 MYCNP04198 464 aaPredicted RBP15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms