RNA–Protein interactions for RNA: ENST00000236017.5

APH1A-201, Transcript of aph-1 homolog A, gamma-secretase subunit, humanhuman

TSL 2

Gene APH1A, Length 663 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APH1A-201ENST00000236017 CHGAP10645 457 aaKnown RBP27.64■■■□□ 2.02
APH1A-201ENST00000236017 ITGAEP38570 1179 aa27.64■■■□□ 2.02
APH1A-201ENST00000236017 ABCF1Q8NE71 845 aaKnown RBP eCLIP27.62■■■□□ 2.01
APH1A-201ENST00000236017 FAM135BQ49AJ0 1406 aa27.6■■■□□ 2.01
APH1A-201ENST00000236017 RIMS2Q9UQ26 1411 aa27.6■■■□□ 2.01
APH1A-201ENST00000236017 PPARGC1BQ86YN6 1023 aaKnown RBP27.6■■■□□ 2.01
APH1A-201ENST00000236017 PLEKHG1Q9ULL1 1385 aa27.6■■■□□ 2.01
APH1A-201ENST00000236017 RBM33Q96EV2 1170 aaKnown RBP27.59■■■□□ 2.01
APH1A-201ENST00000236017 NUP155O75694 1391 aa27.59■■■□□ 2.01
APH1A-201ENST00000236017 ZFYVE9O95405 1425 aa27.58■■■□□ 2.01
APH1A-201ENST00000236017 UNC13BO14795 1591 aa27.56■■■□□ 2
APH1A-201ENST00000236017 TBX22Q9Y458 520 aa27.56■■■□□ 2
APH1A-201ENST00000236017 NKTRP30414 1462 aaKnown RBP27.54■■■□□ 2
APH1A-201ENST00000236017 XIRP1Q702N8 1843 aaKnown RBP27.53■■■□□ 2
APH1A-201ENST00000236017 MSH6P52701 1360 aa27.52■■■□□ 2
APH1A-201ENST00000236017 GCC2Q8IWJ2 1684 aa27.52■■■□□ 2
APH1A-201ENST00000236017 NUTM2DQ5VT03 806 aaPredicted RBP27.51■■□□□ 1.99
APH1A-201ENST00000236017 TMEM131LA2VDJ0 1609 aa27.51■■□□□ 1.99
APH1A-201ENST00000236017 NWD1Q149M9 1564 aa27.48■■□□□ 1.99
APH1A-201ENST00000236017 SLAIN2Q9P270 581 aa27.48■■□□□ 1.99
APH1A-201ENST00000236017 IQGAP3Q86VI3 1631 aa27.47■■□□□ 1.99
APH1A-201ENST00000236017 E9PCH4 1651 aa27.46■■□□□ 1.99
APH1A-201ENST00000236017 C14orf37Q86TY3 774 aa27.43■■□□□ 1.98
APH1A-201ENST00000236017 NCOA3Q9Y6Q9 1424 aa27.42■■□□□ 1.98
APH1A-201ENST00000236017 PIK3R4Q99570 1358 aa27.42■■□□□ 1.98
APH1A-201ENST00000236017 ADAMTS13Q76LX8 1427 aa27.41■■□□□ 1.98
APH1A-201ENST00000236017 MYO5BQ9ULV0 1848 aa27.41■■□□□ 1.98
APH1A-201ENST00000236017 CHD2O14647 1828 aaKnown RBP27.37■■□□□ 1.97
APH1A-201ENST00000236017 ZNF326Q5BKZ1 582 aaKnown RBP27.37■■□□□ 1.97
APH1A-201ENST00000236017 C19orf44Q9H6X5 657 aa27.37■■□□□ 1.97
APH1A-201ENST00000236017 RGS17Q9UGC6 210 aaPredicted RBP27.37■■□□□ 1.97
APH1A-201ENST00000236017 ROBO1Q9Y6N7 1651 aa27.36■■□□□ 1.97
APH1A-201ENST00000236017 CADPS2Q86UW7 1296 aa27.36■■□□□ 1.97
APH1A-201ENST00000236017 AMOTL2Q9Y2J4 779 aa27.36■■□□□ 1.97
APH1A-201ENST00000236017 DIP2AQ14689 1571 aa27.35■■□□□ 1.97
APH1A-201ENST00000236017 ATF3P18847 181 aa27.34■■□□□ 1.97
APH1A-201ENST00000236017 RRBP1Q9P2E9 1410 aaKnown RBP27.33■■□□□ 1.97
APH1A-201ENST00000236017 JCADQ9P266 1359 aa27.29■■□□□ 1.96
APH1A-201ENST00000236017 TRPM2O94759 1503 aa27.29■■□□□ 1.96
APH1A-201ENST00000236017 NAIPQ13075 1403 aa27.26■■□□□ 1.95
APH1A-201ENST00000236017 PTPRUQ92729 1446 aa27.26■■□□□ 1.95
APH1A-201ENST00000236017 TRIM52Q96A61 297 aa27.26■■□□□ 1.95
APH1A-201ENST00000236017 POTEAQ6S8J7 498 aa27.23■■□□□ 1.95
APH1A-201ENST00000236017 SPHKAPQ2M3C7 1700 aa27.21■■□□□ 1.95
APH1A-201ENST00000236017 PHLPP1O60346 1717 aa27.2■■□□□ 1.94
APH1A-201ENST00000236017 SETBP1Q9Y6X0 1596 aa27.19■■□□□ 1.94
APH1A-201ENST00000236017 METP08581 1390 aa27.18■■□□□ 1.94
APH1A-201ENST00000236017 SPATA31A6Q5VVP1 1343 aa27.17■■□□□ 1.94
APH1A-201ENST00000236017 SIPA1L2Q9P2F8 1722 aaPredicted RBP27.17■■□□□ 1.94
APH1A-201ENST00000236017 BRINP3Q76B58 766 aa27.17■■□□□ 1.94
APH1A-201ENST00000236017 SLC4A1APQ9BWU0 796 aaKnown RBP27.17■■□□□ 1.94
APH1A-201ENST00000236017 VGFO15240 615 aaPredicted RBP27.16■■□□□ 1.94
APH1A-201ENST00000236017 HFM1A2PYH4 1435 aa27.16■■□□□ 1.94
APH1A-201ENST00000236017 DCCP43146 1447 aa27.16■■□□□ 1.94
APH1A-201ENST00000236017 MEX3CQ5U5Q3 659 aaKnown RBP27.13■■□□□ 1.93
APH1A-201ENST00000236017 CLTCL1P53675 1640 aa27.12■■□□□ 1.93
APH1A-201ENST00000236017 NRXN3Q9Y4C0 1643 aa27.12■■□□□ 1.93
APH1A-201ENST00000236017 RPGRIP1LQ68CZ1 1315 aa27.12■■□□□ 1.93
APH1A-201ENST00000236017 COL16A1Q07092 1604 aaPredicted RBP27.12■■□□□ 1.93
APH1A-201ENST00000236017 NEXMIFQ5QGS0 1516 aa27.11■■□□□ 1.93
APH1A-201ENST00000236017 AHDC1Q5TGY3 1603 aaPredicted RBP27.1■■□□□ 1.93
APH1A-201ENST00000236017 XRN1Q8IZH2 1706 aaKnown RBP27.08■■□□□ 1.93
APH1A-201ENST00000236017 ZNF772Q68DY9 489 aaPredicted RBP27.06■■□□□ 1.92
APH1A-201ENST00000236017 MST1RQ04912 1400 aa27.06■■□□□ 1.92
APH1A-201ENST00000236017 ADGRL3Q9HAR2 1447 aa27.05■■□□□ 1.92
APH1A-201ENST00000236017 LRRC59Q96AG4 307 aaKnown RBP27.04■■□□□ 1.92
APH1A-201ENST00000236017 KIF1BO60333 1816 aa27.03■■□□□ 1.92
APH1A-201ENST00000236017 NUTM2BA6NNL0 878 aaPredicted RBP27.02■■□□□ 1.92
APH1A-201ENST00000236017 NUTM2EB1AL46 878 aaPredicted RBP27.02■■□□□ 1.92
APH1A-201ENST00000236017 NUTM2AQ8IVF1 878 aaPredicted RBP27.02■■□□□ 1.92
APH1A-201ENST00000236017 LRP6O75581 1613 aa27.01■■□□□ 1.92
APH1A-201ENST00000236017 ASXL1Q8IXJ9 1541 aa27.01■■□□□ 1.91
APH1A-201ENST00000236017 SETD5Q9C0A6 1442 aa26.99■■□□□ 1.91
APH1A-201ENST00000236017 FOXD1Q16676 465 aa26.99■■□□□ 1.91
APH1A-201ENST00000236017 PTCH1Q13635 1447 aa26.97■■□□□ 1.91
APH1A-201ENST00000236017 ROBO2Q9HCK4 1378 aa26.96■■□□□ 1.91
APH1A-201ENST00000236017 SHPRHQ149N8 1683 aa26.95■■□□□ 1.91
APH1A-201ENST00000236017 DDX17Q92841 729 aaKnown RBP26.95■■□□□ 1.9
APH1A-201ENST00000236017 MPHOSPH9Q99550 1183 aa26.95■■□□□ 1.9
APH1A-201ENST00000236017 C1orf167Q5SNV9 1468 aa26.93■■□□□ 1.9
APH1A-201ENST00000236017 CCDC144AA2RUR9 1427 aa26.92■■□□□ 1.9
APH1A-201ENST00000236017 RGL3Q3MIN7 710 aa26.92■■□□□ 1.9
APH1A-201ENST00000236017 RXRBP28702 533 aa26.91■■□□□ 1.9
APH1A-201ENST00000236017 ACIN1Q9UKV3 1341 aaKnown RBP26.9■■□□□ 1.9
APH1A-201ENST00000236017 PRAG1Q86YV5 1406 aa26.9■■□□□ 1.9
APH1A-201ENST00000236017 ORAI2Q96SN7 254 aa26.89■■□□□ 1.9
APH1A-201ENST00000236017 ADGRF5Q8IZF2 1346 aa26.89■■□□□ 1.89
APH1A-201ENST00000236017 AFF2P51816 1311 aa26.88■■□□□ 1.89
APH1A-201ENST00000236017 PNPLA6Q8IY17 1366 aa26.87■■□□□ 1.89
APH1A-201ENST00000236017 NHSL1Q5SYE7 1610 aa26.87■■□□□ 1.89
APH1A-201ENST00000236017 ANKRD30BQ9BXX2 1392 aa26.86■■□□□ 1.89
APH1A-201ENST00000236017 NALCNQ8IZF0 1738 aa26.86■■□□□ 1.89
APH1A-201ENST00000236017 C8orf37Q96NL8 207 aa26.85■■□□□ 1.89
APH1A-201ENST00000236017 SOS2Q07890 1332 aaPredicted RBP26.84■■□□□ 1.89
APH1A-201ENST00000236017 SETD1AO15047 1707 aaKnown RBP26.83■■□□□ 1.89
APH1A-201ENST00000236017 STK26Q9P289 416 aa26.83■■□□□ 1.89
APH1A-201ENST00000236017 SPATA31E1Q6ZUB1 1445 aa26.82■■□□□ 1.88
APH1A-201ENST00000236017 PPLO60437 1756 aa26.82■■□□□ 1.88
APH1A-201ENST00000236017 ESCO1Q5FWF5 840 aa26.8■■□□□ 1.88
APH1A-201ENST00000236017 NGLY1Q96IV0 654 aa26.8■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms