RNA–Protein interactions for RNA: ENST00000235372.11

PRDM2-201, Transcript of PR/SET domain 2, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PRDM2, Length 7,957 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM2-201ENST00000235372 CCNB3Q8WWL7 1395 aa9.15□□□□□ -0.94
PRDM2-201ENST00000235372 SKIDA1Q1XH10 827 aa9.14□□□□□ -0.95
PRDM2-201ENST00000235372 EZRP15311 586 aaKnown RBP9.14□□□□□ -0.95
PRDM2-201ENST00000235372 ERLIN2O94905 339 aa9.14□□□□□ -0.95
PRDM2-201ENST00000235372 ERCC4Q92889 916 aaPredicted RBP9.14□□□□□ -0.95
PRDM2-201ENST00000235372 SYTL4Q96C24 671 aaPredicted RBP9.14□□□□□ -0.95
PRDM2-201ENST00000235372 MAPK8IP2Q13387 824 aaPredicted RBP9.14□□□□□ -0.95
PRDM2-201ENST00000235372 SKOR2Q2VWA4 1001 aaPredicted RBP9.14□□□□□ -0.95
PRDM2-201ENST00000235372 ZKSCAN1P17029 563 aaPredicted RBP9.13□□□□□ -0.95
PRDM2-201ENST00000235372 XBP1P17861 261 aa9.13□□□□□ -0.95
PRDM2-201ENST00000235372 NEBLO76041 1014 aa9.13□□□□□ -0.95
PRDM2-201ENST00000235372 DESP17661 470 aa9.13□□□□□ -0.95
PRDM2-201ENST00000235372 OLFM4Q6UX06 510 aa9.13□□□□□ -0.95
PRDM2-201ENST00000235372 CWC15Q9P013 229 aaKnown RBP9.13□□□□□ -0.95
PRDM2-201ENST00000235372 MNS1Q8NEH6 495 aa9.13□□□□□ -0.95
PRDM2-201ENST00000235372 C9orf78Q9NZ63 289 aaPredicted RBP9.13□□□□□ -0.95
PRDM2-201ENST00000235372 RCAN3Q9UKA8 241 aa9.13□□□□□ -0.95
PRDM2-201ENST00000235372 TRIM21P19474 475 aaKnown RBP9.13□□□□□ -0.95
PRDM2-201ENST00000235372 HSP90AB4PQ58FF6 505 aa9.12□□□□□ -0.95
PRDM2-201ENST00000235372 RNF20Q5VTR2 975 aa9.12□□□□□ -0.95
PRDM2-201ENST00000235372 BICD2Q8TD16 824 aa9.12□□□□□ -0.95
PRDM2-201ENST00000235372 ANO2Q9NQ90 1003 aa9.12□□□□□ -0.95
PRDM2-201ENST00000235372 CHMP5Q9NZZ3 219 aa9.12□□□□□ -0.95
PRDM2-201ENST00000235372 SASS6Q6UVJ0 657 aa9.12□□□□□ -0.95
PRDM2-201ENST00000235372 STK11IPQ8N1F8 1099 aa9.12□□□□□ -0.95
PRDM2-201ENST00000235372 NGEFQ8N5V2 710 aa9.12□□□□□ -0.95
PRDM2-201ENST00000235372 EIF4G1Q04637 1599 aaKnown RBP9.12□□□□□ -0.95
PRDM2-201ENST00000235372 ROCK2O75116 1388 aaKnown RBP9.11□□□□□ -0.95
PRDM2-201ENST00000235372 ENOX2Q16206 610 aaKnown RBP9.11□□□□□ -0.95
PRDM2-201ENST00000235372 SETD1BQ9UPS6 1966 aaKnown RBP9.11□□□□□ -0.95
PRDM2-201ENST00000235372 CDK5RAP3Q96JB5 506 aa9.11□□□□□ -0.95
PRDM2-201ENST00000235372 DDX49Q9Y6V7 483 aaKnown RBP9.11□□□□□ -0.95
PRDM2-201ENST00000235372 GBP2P32456 591 aaPredicted RBP9.11□□□□□ -0.95
PRDM2-201ENST00000235372 CCDC27Q2M243 656 aa9.1□□□□□ -0.95
PRDM2-201ENST00000235372 DCAF1Q9Y4B6 1507 aa9.1□□□□□ -0.95
PRDM2-201ENST00000235372 HMGN5P82970 282 aaKnown RBP9.1□□□□□ -0.95
PRDM2-201ENST00000235372 NAT10Q9H0A0 1025 aaKnown RBP9.1□□□□□ -0.95
PRDM2-201ENST00000235372 IFIT2P09913 472 aaKnown RBP9.1□□□□□ -0.95
PRDM2-201ENST00000235372 TEFQ10587 303 aa9.1□□□□□ -0.95
PRDM2-201ENST00000235372 GOLGA6L7A0A1B0GV03 622 aa9.1□□□□□ -0.95
PRDM2-201ENST00000235372 FYB1O15117 783 aa9.1□□□□□ -0.95
PRDM2-201ENST00000235372 DDX58O95786 925 aaKnown RBP9.1□□□□□ -0.95
PRDM2-201ENST00000235372 MAGEC2Q9UBF1 373 aaPredicted RBP9.09□□□□□ -0.95
PRDM2-201ENST00000235372 GOLGA6L10A6NI86 522 aa9.09□□□□□ -0.95
PRDM2-201ENST00000235372 DNAI2Q9GZS0 605 aa9.09□□□□□ -0.95
PRDM2-201ENST00000235372 SF3B2Q13435 895 aaKnown RBP9.09□□□□□ -0.95
PRDM2-201ENST00000235372 INCENPQ9NQS7 918 aa9.09□□□□□ -0.95
PRDM2-201ENST00000235372 CFAP65Q6ZU64 1925 aaKnown RBP9.09□□□□□ -0.95
PRDM2-201ENST00000235372 GRIPAP1Q4V328 841 aa9.09□□□□□ -0.95
PRDM2-201ENST00000235372 CENPJQ9HC77 1338 aaPredicted RBP9.08□□□□□ -0.96
PRDM2-201ENST00000235372 RALBP1Q15311 655 aa9.08□□□□□ -0.96
PRDM2-201ENST00000235372 PDCL3Q9H2J4 239 aa9.08□□□□□ -0.96
PRDM2-201ENST00000235372 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.08□□□□□ -0.96
PRDM2-201ENST00000235372 PDILTQ8N807 584 aa9.08□□□□□ -0.96
PRDM2-201ENST00000235372 SMARCE1Q969G3 411 aa9.08□□□□□ -0.96
PRDM2-201ENST00000235372 SLC4A3P48751 1232 aa9.08□□□□□ -0.96
PRDM2-201ENST00000235372 SPDYE4A6NLX3 237 aa9.08□□□□□ -0.96
PRDM2-201ENST00000235372 RALYLQ86SE5 291 aaKnown RBP9.08□□□□□ -0.96
PRDM2-201ENST00000235372 RSPH6AQ9H0K4 717 aa9.08□□□□□ -0.96
PRDM2-201ENST00000235372 CGNL1Q0VF96 1302 aa9.08□□□□□ -0.96
PRDM2-201ENST00000235372 KRT18P05783 430 aaKnown RBP9.08□□□□□ -0.96
PRDM2-201ENST00000235372 SLC3A2P08195 630 aaKnown RBP9.08□□□□□ -0.96
PRDM2-201ENST00000235372 TSPYL1Q9H0U9 437 aa9.07□□□□□ -0.96
PRDM2-201ENST00000235372 ANKRD45Q5TZF3 282 aa9.07□□□□□ -0.96
PRDM2-201ENST00000235372 CCDC73Q6ZRK6 1079 aa9.07□□□□□ -0.96
PRDM2-201ENST00000235372 CLASRPQ8N2M8 674 aaKnown RBP9.07□□□□□ -0.96
PRDM2-201ENST00000235372 TXLNAP40222 546 aa9.07□□□□□ -0.96
PRDM2-201ENST00000235372 PPP1R1BQ9UD71 204 aaPredicted RBP9.07□□□□□ -0.96
PRDM2-201ENST00000235372 REC8O95072 547 aa9.06□□□□□ -0.96
PRDM2-201ENST00000235372 HSP90AB3PQ58FF7 597 aa9.06□□□□□ -0.96
PRDM2-201ENST00000235372 G3BP1Q13283 466 aaKnown RBP eCLIP9.06□□□□□ -0.96
PRDM2-201ENST00000235372 TTLL5Q6EMB2 1281 aa9.06□□□□□ -0.96
PRDM2-201ENST00000235372 TMEM87AQ8NBN3 555 aa9.06□□□□□ -0.96
PRDM2-201ENST00000235372 GOLGA3Q08378 1498 aa9.06□□□□□ -0.96
PRDM2-201ENST00000235372 IFT57Q9NWB7 429 aa9.06□□□□□ -0.96
PRDM2-201ENST00000235372 LUC7LQ9NQ29 371 aaKnown RBP9.06□□□□□ -0.96
PRDM2-201ENST00000235372 MPHOSPH10O00566 681 aaKnown RBP9.06□□□□□ -0.96
PRDM2-201ENST00000235372 MTMR7Q9Y216 660 aa9.06□□□□□ -0.96
PRDM2-201ENST00000235372 CLUAP1Q96AJ1 413 aa9.05□□□□□ -0.96
PRDM2-201ENST00000235372 SART3Q15020 963 aaKnown RBP9.05□□□□□ -0.96
PRDM2-201ENST00000235372 RABEP1Q15276 862 aa9.05□□□□□ -0.96
PRDM2-201ENST00000235372 FILIP1LQ4L180 1135 aa9.05□□□□□ -0.96
PRDM2-201ENST00000235372 MATR3P43243 847 aaKnown RBP eCLIP9.05□□□□□ -0.963e-6■■■□□ 16.2
PRDM2-201ENST00000235372 TXLNBQ8N3L3 684 aa9.05□□□□□ -0.96
PRDM2-201ENST00000235372 EIF2S2P20042 333 aaKnown RBP9.05□□□□□ -0.96
PRDM2-201ENST00000235372 FOSBP53539 338 aa9.05□□□□□ -0.96
PRDM2-201ENST00000235372 ZNF526Q8TF50 670 aaPredicted RBP9.05□□□□□ -0.96
PRDM2-201ENST00000235372 DYDC1Q8WWB3 177 aa9.04□□□□□ -0.96
PRDM2-201ENST00000235372 STAMBPO95630 424 aa9.04□□□□□ -0.96
PRDM2-201ENST00000235372 NUTM2FA1L443 756 aa9.04□□□□□ -0.96
PRDM2-201ENST00000235372 AXDND1Q5T1B0 1012 aaPredicted RBP9.04□□□□□ -0.96
PRDM2-201ENST00000235372 ROCK1Q13464 1354 aa9.04□□□□□ -0.96
PRDM2-201ENST00000235372 BAZ1BQ9UIG0 1483 aaKnown RBP9.04□□□□□ -0.96
PRDM2-201ENST00000235372 CT47B1P0C2W7 299 aaPredicted RBP9.04□□□□□ -0.96
PRDM2-201ENST00000235372 LEKR1Q6ZMV7 388 aa9.04□□□□□ -0.96
PRDM2-201ENST00000235372 CCDC112Q8NEF3 446 aa9.04□□□□□ -0.96
PRDM2-201ENST00000235372 CCP110O43303 1012 aa9.03□□□□□ -0.96
PRDM2-201ENST00000235372 FEZ1Q99689 392 aa9.03□□□□□ -0.96
PRDM2-201ENST00000235372 FHAD1B1AJZ9 1412 aa9.03□□□□□ -0.96
PRDM2-201ENST00000235372 NF2P35240 595 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 988.3 ms