RNA–Protein interactions for RNA: ENST00000230418.8

PTK7-201, Transcript of protein tyrosine kinase 7 (inactive), humanhuman

TSL 1 (best)

Gene PTK7, Length 3,958 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTK7-201ENST00000230418 STAC3Q96MF2 364 aa18.63■□□□□ 0.57
PTK7-201ENST00000230418 PAK3O75914 559 aaPredicted RBP18.63■□□□□ 0.57
PTK7-201ENST00000230418 ABCC10Q5T3U5 1492 aa18.63■□□□□ 0.57
PTK7-201ENST00000230418 ABCC2Q92887 1545 aa18.62■□□□□ 0.57
PTK7-201ENST00000230418 TESK2Q96S53 571 aa18.62■□□□□ 0.57
PTK7-201ENST00000230418 COG6Q9Y2V7 657 aa18.62■□□□□ 0.57
PTK7-201ENST00000230418 NOP58Q9Y2X3 529 aaKnown RBP18.62■□□□□ 0.57
PTK7-201ENST00000230418 PRAG1Q86YV5 1406 aa18.61■□□□□ 0.57
PTK7-201ENST00000230418 MBD5Q9P267 1494 aa18.6■□□□□ 0.57
PTK7-201ENST00000230418 DHX29Q7Z478 1369 aaKnown RBP18.6■□□□□ 0.57
PTK7-201ENST00000230418 TCERG1O14776 1098 aaKnown RBP18.6■□□□□ 0.57
PTK7-201ENST00000230418 GCC2Q8IWJ2 1684 aa18.6■□□□□ 0.57
PTK7-201ENST00000230418 ABCA8O94911 1581 aa18.6■□□□□ 0.57
PTK7-201ENST00000230418 ADGRL2O95490 1459 aa18.6■□□□□ 0.57
PTK7-201ENST00000230418 DENND4BO75064 1496 aaPredicted RBP18.6■□□□□ 0.57
PTK7-201ENST00000230418 SKAP1Q86WV1 359 aa18.59■□□□□ 0.57
PTK7-201ENST00000230418 RALGAPBQ86X10 1494 aa18.59■□□□□ 0.57
PTK7-201ENST00000230418 ARXQ96QS3 562 aa18.58■□□□□ 0.57
PTK7-201ENST00000230418 SMC4Q9NTJ3 1288 aa18.58■□□□□ 0.57
PTK7-201ENST00000230418 TXNDC2Q86VQ3 553 aa18.58■□□□□ 0.57
PTK7-201ENST00000230418 WDR7Q9Y4E6 1490 aa18.58■□□□□ 0.56
PTK7-201ENST00000230418 HMOX1P09601 288 aa18.57■□□□□ 0.56
PTK7-201ENST00000230418 NOS1P29475 1434 aa18.57■□□□□ 0.56
PTK7-201ENST00000230418 SHANK2Q9UPX8 1470 aa18.57■□□□□ 0.56
PTK7-201ENST00000230418 TCP11L2Q8N4U5 519 aa18.57■□□□□ 0.56
PTK7-201ENST00000230418 ITPRIPQ8IWB1 547 aa18.56■□□□□ 0.56
PTK7-201ENST00000230418 KDM5BQ9UGL1 1544 aa18.56■□□□□ 0.56
PTK7-201ENST00000230418 WAPLQ7Z5K2 1190 aa18.55■□□□□ 0.56
PTK7-201ENST00000230418 CABP1Q9NZU7 370 aa18.55■□□□□ 0.56
PTK7-201ENST00000230418 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.55■□□□□ 0.56
PTK7-201ENST00000230418 DUOX2Q9NRD8 1548 aa18.55■□□□□ 0.56
PTK7-201ENST00000230418 LTV1Q96GA3 475 aaPredicted RBP18.55■□□□□ 0.56
PTK7-201ENST00000230418 E9PSI1 815 aa18.55■□□□□ 0.56
PTK7-201ENST00000230418 BCAR3O75815 825 aa18.55■□□□□ 0.56
PTK7-201ENST00000230418 MYH16Q9H6N6 1097 aa18.55■□□□□ 0.56
PTK7-201ENST00000230418 NGDNQ8NEJ9 315 aaKnown RBP18.54■□□□□ 0.56
PTK7-201ENST00000230418 CFAP65Q6ZU64 1925 aaKnown RBP18.54■□□□□ 0.56
PTK7-201ENST00000230418 PANK1Q8TE04 598 aa18.54■□□□□ 0.56
PTK7-201ENST00000230418 HSP90AA1P07900 732 aaKnown RBP18.53■□□□□ 0.56
PTK7-201ENST00000230418 EID1Q9Y6B2 187 aa18.53■□□□□ 0.56
PTK7-201ENST00000230418 A2MP01023 1474 aa18.52■□□□□ 0.56
PTK7-201ENST00000230418 APBB1O00213 710 aa18.52■□□□□ 0.56
PTK7-201ENST00000230418 SLC52A1Q9NWF4 448 aa18.52■□□□□ 0.56
PTK7-201ENST00000230418 SMG6Q86US8 1419 aaKnown RBP18.52■□□□□ 0.55
PTK7-201ENST00000230418 CHD1O14646 1710 aa18.52■□□□□ 0.55
PTK7-201ENST00000230418 C20orf194Q5TEA3 1177 aa18.51■□□□□ 0.55
PTK7-201ENST00000230418 SLC26A8Q96RN1 970 aa18.51■□□□□ 0.55
PTK7-201ENST00000230418 RUNDC1Q96C34 613 aa18.51■□□□□ 0.55
PTK7-201ENST00000230418 CDK19Q9BWU1 502 aa18.5■□□□□ 0.55
PTK7-201ENST00000230418 SPATA31E1Q6ZUB1 1445 aa18.5■□□□□ 0.55
PTK7-201ENST00000230418 PER1O15534 1290 aaPredicted RBP18.5■□□□□ 0.55
PTK7-201ENST00000230418 FBLN1P23142 703 aa18.5■□□□□ 0.55
PTK7-201ENST00000230418 PDE4AP27815 886 aa18.5■□□□□ 0.55
PTK7-201ENST00000230418 RIPK4P57078 832 aa18.5■□□□□ 0.55
PTK7-201ENST00000230418 PNNQ9H307 717 aaKnown RBP18.5■□□□□ 0.55
PTK7-201ENST00000230418 SAMD9LQ8IVG5 1584 aa18.5■□□□□ 0.55
PTK7-201ENST00000230418 DIAPH1O60610 1272 aaKnown RBP18.49■□□□□ 0.55
PTK7-201ENST00000230418 SLC4A3P48751 1232 aa18.49■□□□□ 0.55
PTK7-201ENST00000230418 NSD3Q9BZ95 1437 aa18.49■□□□□ 0.55
PTK7-201ENST00000230418 TTC37Q6PGP7 1564 aa18.49■□□□□ 0.55
PTK7-201ENST00000230418 NUTM2GQ5VZR2 741 aa18.49■□□□□ 0.55
PTK7-201ENST00000230418 TSR2Q969E8 191 aaKnown RBP18.48■□□□□ 0.55
PTK7-201ENST00000230418 SPRYD3Q8NCJ5 442 aa18.48■□□□□ 0.55
PTK7-201ENST00000230418 COG3Q96JB2 828 aa18.48■□□□□ 0.55
PTK7-201ENST00000230418 CEBPAP49715 358 aaPredicted RBP18.47■□□□□ 0.55
PTK7-201ENST00000230418 AMER1Q5JTC6 1135 aaPredicted RBP18.47■□□□□ 0.55
PTK7-201ENST00000230418 SCAF11Q99590 1463 aaKnown RBP18.46■□□□□ 0.55
PTK7-201ENST00000230418 PMFBP1Q8TBY8 1022 aa18.44■□□□□ 0.54
PTK7-201ENST00000230418 ARHGEF12Q9NZN5 1544 aa18.44■□□□□ 0.54
PTK7-201ENST00000230418 C14orf93Q9H972 538 aaKnown RBP18.44■□□□□ 0.54
PTK7-201ENST00000230418 DDRGK1Q96HY6 314 aa18.43■□□□□ 0.54
PTK7-201ENST00000230418 A0A0G2JS52 829 aa18.43■□□□□ 0.54
PTK7-201ENST00000230418 AMPHP49418 695 aa18.43■□□□□ 0.54
PTK7-201ENST00000230418 CARD14Q9BXL6 1004 aa18.42■□□□□ 0.54
PTK7-201ENST00000230418 UHRF1BP1Q6BDS2 1440 aa18.42■□□□□ 0.54
PTK7-201ENST00000230418 CDC42BPAQ5VT25 1732 aa18.42■□□□□ 0.54
PTK7-201ENST00000230418 RTF1Q92541 710 aaKnown RBP18.41■□□□□ 0.54
PTK7-201ENST00000230418 ADGBQ8N7X0 1667 aa18.41■□□□□ 0.54
PTK7-201ENST00000230418 IPO9Q96P70 1041 aaKnown RBP18.41■□□□□ 0.54
PTK7-201ENST00000230418 RPGRIP1LQ68CZ1 1315 aa18.4■□□□□ 0.54
PTK7-201ENST00000230418 PRKAR2BP31323 418 aa18.39■□□□□ 0.53
PTK7-201ENST00000230418 RRS1Q15050 365 aaKnown RBP18.39■□□□□ 0.53
PTK7-201ENST00000230418 MS4A1P11836 297 aa18.39■□□□□ 0.53
PTK7-201ENST00000230418 CENPQQ7L2Z9 268 aaPredicted RBP18.39■□□□□ 0.53
PTK7-201ENST00000230418 ZNF518AQ6AHZ1 1483 aa18.39■□□□□ 0.53
PTK7-201ENST00000230418 PARD3Q8TEW0 1356 aa18.38■□□□□ 0.53
PTK7-201ENST00000230418 IPO8O15397 1037 aaKnown RBP18.38■□□□□ 0.53
PTK7-201ENST00000230418 RWDD1Q9H446 243 aaPredicted RBP18.38■□□□□ 0.53
PTK7-201ENST00000230418 EXOSC9Q06265 439 aaKnown RBP18.38■□□□□ 0.53
PTK7-201ENST00000230418 WWC1Q8IX03 1113 aa18.38■□□□□ 0.53
PTK7-201ENST00000230418 RBM33Q96EV2 1170 aaKnown RBP18.38■□□□□ 0.53
PTK7-201ENST00000230418 PLA2R1Q13018 1463 aa18.37■□□□□ 0.53
PTK7-201ENST00000230418 ZKSCAN2Q63HK3 967 aa18.37■□□□□ 0.53
PTK7-201ENST00000230418 SLFN5Q08AF3 891 aa18.36■□□□□ 0.53
PTK7-201ENST00000230418 SLC4A10Q6U841 1118 aa18.36■□□□□ 0.53
PTK7-201ENST00000230418 THUMPD2Q9BTF0 503 aaKnown RBP18.36■□□□□ 0.53
PTK7-201ENST00000230418 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.36■□□□□ 0.53
PTK7-201ENST00000230418 HAP1P54257 671 aaPredicted RBP18.36■□□□□ 0.53
PTK7-201ENST00000230418 NECTIN2Q92692 538 aa18.35■□□□□ 0.53
PTK7-201ENST00000230418 SLKQ9H2G2 1235 aaPredicted RBP18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms