RNA–Protein interactions for RNA: ENST00000199448.8

EPDR1-201, Transcript of ependymin related 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene EPDR1, Length 2,599 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPDR1-201ENST00000199448 RNF17Q9BXT8 1623 aaKnown RBP26.9■■□□□ 1.9
EPDR1-201ENST00000199448 BCAR3O75815 825 aa26.9■■□□□ 1.9
EPDR1-201ENST00000199448 SLFN5Q08AF3 891 aa26.9■■□□□ 1.9
EPDR1-201ENST00000199448 RTN4Q9NQC3 1192 aaKnown RBP26.88■■□□□ 1.89
EPDR1-201ENST00000199448 MADDQ8WXG6 1647 aa26.87■■□□□ 1.89
EPDR1-201ENST00000199448 C8orf34Q49A92 452 aa26.87■■□□□ 1.89
EPDR1-201ENST00000199448 EFCAB2Q5VUJ9 269 aa26.87■■□□□ 1.89
EPDR1-201ENST00000199448 CENPQQ7L2Z9 268 aaPredicted RBP26.87■■□□□ 1.89
EPDR1-201ENST00000199448 PLCH2O75038 1416 aa26.84■■□□□ 1.89
EPDR1-201ENST00000199448 CFAP70Q5T0N1 1121 aa26.83■■□□□ 1.89
EPDR1-201ENST00000199448 SPAG9O60271 1321 aaKnown RBP26.82■■□□□ 1.88
EPDR1-201ENST00000199448 SCAF11Q99590 1463 aaKnown RBP26.82■■□□□ 1.88
EPDR1-201ENST00000199448 ASXL1Q8IXJ9 1541 aa26.81■■□□□ 1.88
EPDR1-201ENST00000199448 ABCC2Q92887 1545 aa26.81■■□□□ 1.88
EPDR1-201ENST00000199448 PPM1GO15355 546 aaPredicted RBP26.81■■□□□ 1.88
EPDR1-201ENST00000199448 CARD14Q9BXL6 1004 aa26.81■■□□□ 1.88
EPDR1-201ENST00000199448 IQGAP1P46940 1657 aa26.81■■□□□ 1.88
EPDR1-201ENST00000199448 CHD1O14646 1710 aa26.81■■□□□ 1.88
EPDR1-201ENST00000199448 TRMT2AQ8IZ69 625 aaKnown RBP26.8■■□□□ 1.88
EPDR1-201ENST00000199448 DDRGK1Q96HY6 314 aa26.8■■□□□ 1.88
EPDR1-201ENST00000199448 FAM161AQ3B820 660 aa26.79■■□□□ 1.88
EPDR1-201ENST00000199448 USP35Q9P2H5 1018 aa26.79■■□□□ 1.88
EPDR1-201ENST00000199448 NFKBIBQ15653 356 aa26.78■■□□□ 1.88
EPDR1-201ENST00000199448 CDCA8Q53HL2 280 aa26.77■■□□□ 1.88
EPDR1-201ENST00000199448 IGHDP01880 384 aa26.76■■□□□ 1.87
EPDR1-201ENST00000199448 CLTCL1P53675 1640 aa26.76■■□□□ 1.87
EPDR1-201ENST00000199448 PIK3C2GO75747 1445 aa26.76■■□□□ 1.87
EPDR1-201ENST00000199448 ADGRF5Q8IZF2 1346 aa26.76■■□□□ 1.87
EPDR1-201ENST00000199448 GOLGA6L2Q8N9W4 650 aaPredicted RBP26.75■■□□□ 1.87
EPDR1-201ENST00000199448 SYNMO15061 1565 aa26.75■■□□□ 1.87
EPDR1-201ENST00000199448 ABCC1P33527 1531 aa26.74■■□□□ 1.87
EPDR1-201ENST00000199448 MYOM1P52179 1685 aa26.74■■□□□ 1.87
EPDR1-201ENST00000199448 TNNT2P45379 298 aaPredicted RBP26.73■■□□□ 1.87
EPDR1-201ENST00000199448 UGGT1Q9NYU2 1555 aa26.73■■□□□ 1.87
EPDR1-201ENST00000199448 TRPM2O94759 1503 aa26.73■■□□□ 1.87
EPDR1-201ENST00000199448 KIF3BO15066 747 aa26.72■■□□□ 1.87
EPDR1-201ENST00000199448 NEUROD2Q15784 382 aa26.71■■□□□ 1.87
EPDR1-201ENST00000199448 PTPRTO14522 1441 aa26.71■■□□□ 1.87
EPDR1-201ENST00000199448 SCAPERQ9BY12 1400 aa26.71■■□□□ 1.87
EPDR1-201ENST00000199448 PANK1Q8TE04 598 aa26.7■■□□□ 1.87
EPDR1-201ENST00000199448 NKTRP30414 1462 aaKnown RBP26.69■■□□□ 1.86
EPDR1-201ENST00000199448 SHROOM2Q13796 1616 aa26.69■■□□□ 1.86
EPDR1-201ENST00000199448 DAXXQ9UER7 740 aaPredicted RBP26.69■■□□□ 1.86
EPDR1-201ENST00000199448 RRP7AQ9Y3A4 280 aaKnown RBP26.69■■□□□ 1.86
EPDR1-201ENST00000199448 SPHKAPQ2M3C7 1700 aa26.69■■□□□ 1.86
EPDR1-201ENST00000199448 COG6Q9Y2V7 657 aa26.67■■□□□ 1.86
EPDR1-201ENST00000199448 ERVK-7P63135 1459 aa26.67■■□□□ 1.86
EPDR1-201ENST00000199448 BRPF3Q9ULD4 1205 aa26.66■■□□□ 1.86
EPDR1-201ENST00000199448 ZCCHC11Q5TAX3 1644 aaKnown RBP26.66■■□□□ 1.86
EPDR1-201ENST00000199448 E9PSI1 815 aa26.66■■□□□ 1.86
EPDR1-201ENST00000199448 SEC24BO95487 1268 aa26.65■■□□□ 1.86
EPDR1-201ENST00000199448 TNNQ9UQP3 1299 aa26.64■■□□□ 1.86
EPDR1-201ENST00000199448 NPC1L1Q9UHC9 1359 aa26.64■■□□□ 1.86
EPDR1-201ENST00000199448 ZFYVE16Q7Z3T8 1539 aa26.64■■□□□ 1.86
EPDR1-201ENST00000199448 CLASP1Q7Z460 1538 aa26.64■■□□□ 1.86
EPDR1-201ENST00000199448 FRAT2O75474 233 aaPredicted RBP26.64■■□□□ 1.85
EPDR1-201ENST00000199448 ANO8Q9HCE9 1232 aaPredicted RBP26.64■■□□□ 1.85
EPDR1-201ENST00000199448 EIF3AQ14152 1382 aaKnown RBP26.63■■□□□ 1.85
EPDR1-201ENST00000199448 GSE1Q14687 1217 aa26.63■■□□□ 1.85
EPDR1-201ENST00000199448 FRAT1Q92837 279 aaPredicted RBP26.63■■□□□ 1.85
EPDR1-201ENST00000199448 WWC1Q8IX03 1113 aa26.63■■□□□ 1.85
EPDR1-201ENST00000199448 CEP152O94986 1710 aa26.63■■□□□ 1.85
EPDR1-201ENST00000199448 USP19O94966 1318 aa26.6■■□□□ 1.85
EPDR1-201ENST00000199448 BCL2L13Q9BXK5 485 aa26.59■■□□□ 1.85
EPDR1-201ENST00000199448 CANXP27824 592 aaKnown RBP26.59■■□□□ 1.85
EPDR1-201ENST00000199448 SLC12A5Q9H2X9 1139 aa26.59■■□□□ 1.85
EPDR1-201ENST00000199448 CHGAP10645 457 aaKnown RBP26.58■■□□□ 1.85
EPDR1-201ENST00000199448 CENPJQ9HC77 1338 aaPredicted RBP26.58■■□□□ 1.85
EPDR1-201ENST00000199448 TRAK1Q9UPV9 953 aa26.58■■□□□ 1.85
EPDR1-201ENST00000199448 KDM5AP29375 1690 aaKnown RBP26.58■■□□□ 1.85
EPDR1-201ENST00000199448 RTEL1-TNFRSF6BF6WH68 1400 aa26.55■■□□□ 1.84
EPDR1-201ENST00000199448 CLUAP1Q96AJ1 413 aa26.55■■□□□ 1.84
EPDR1-201ENST00000199448 STAC3Q96MF2 364 aa26.55■■□□□ 1.84
EPDR1-201ENST00000199448 KANK1Q14678 1352 aa26.55■■□□□ 1.84
EPDR1-201ENST00000199448 RLBP1P12271 317 aa26.54■■□□□ 1.84
EPDR1-201ENST00000199448 ABCA6Q8N139 1617 aa26.54■■□□□ 1.84
EPDR1-201ENST00000199448 TMEM132EQ6IEE7 984 aa26.54■■□□□ 1.84
EPDR1-201ENST00000199448 MORC1Q86VD1 984 aa26.53■■□□□ 1.84
EPDR1-201ENST00000199448 TET3O43151 1660 aa26.52■■□□□ 1.84
EPDR1-201ENST00000199448 SENP3Q9H4L4 574 aaPredicted RBP26.51■■□□□ 1.83
EPDR1-201ENST00000199448 DEPDC5O75140 1603 aa26.51■■□□□ 1.83
EPDR1-201ENST00000199448 NSD3Q9BZ95 1437 aa26.51■■□□□ 1.83
EPDR1-201ENST00000199448 PDE3AQ14432 1141 aa26.51■■□□□ 1.83
EPDR1-201ENST00000199448 TCP11L2Q8N4U5 519 aa26.51■■□□□ 1.83
EPDR1-201ENST00000199448 PCDHB15Q9Y5E8 787 aa26.5■■□□□ 1.83
EPDR1-201ENST00000199448 CGNL1Q0VF96 1302 aa26.5■■□□□ 1.83
EPDR1-201ENST00000199448 MAP3K4Q9Y6R4 1608 aa26.49■■□□□ 1.83
EPDR1-201ENST00000199448 ATP7AQ04656 1500 aa26.49■■□□□ 1.83
EPDR1-201ENST00000199448 RARSP54136 660 aaKnown RBP26.49■■□□□ 1.83
EPDR1-201ENST00000199448 FANCAO15360 1455 aa26.48■■□□□ 1.83
EPDR1-201ENST00000199448 NUTM2DQ5VT03 806 aaPredicted RBP26.48■■□□□ 1.83
EPDR1-201ENST00000199448 POLR3AO14802 1390 aaPredicted RBP26.47■■□□□ 1.83
EPDR1-201ENST00000199448 NOS1P29475 1434 aa26.47■■□□□ 1.83
EPDR1-201ENST00000199448 VWDEQ8N2E2 1590 aa26.46■■□□□ 1.83
EPDR1-201ENST00000199448 MTHFSP49914 203 aa26.46■■□□□ 1.83
EPDR1-201ENST00000199448 SLKQ9H2G2 1235 aaPredicted RBP26.44■■□□□ 1.82
EPDR1-201ENST00000199448 UHRF1BP1LA0JNW5 1464 aa26.43■■□□□ 1.82
EPDR1-201ENST00000199448 MROH1Q8NDA8 1641 aa26.43■■□□□ 1.82
EPDR1-201ENST00000199448 RUNDC1Q96C34 613 aa26.43■■□□□ 1.82
EPDR1-201ENST00000199448 MYOM2P54296 1465 aa26.42■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms