RNA–Protein interactions for RNA: ENST00000027335.7

CDH17-201, Transcript of cadherin 17, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH17, Length 3,693 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH17-201ENST00000027335 CANXP27824 592 aaKnown RBP6.56□□□□□ -1.36
CDH17-201ENST00000027335 RSPH4AQ5TD94 716 aa6.56□□□□□ -1.36
CDH17-201ENST00000027335 ERICH6BQ5W0A0 696 aa6.56□□□□□ -1.36
CDH17-201ENST00000027335 PAXIP1Q6ZW49 1069 aaPredicted RBP6.56□□□□□ -1.36
CDH17-201ENST00000027335 DAPK1P53355 1430 aa6.56□□□□□ -1.36
CDH17-201ENST00000027335 ANKRD50Q9ULJ7 1429 aa6.56□□□□□ -1.36
CDH17-201ENST00000027335 TRAPPC8Q9Y2L5 1435 aa6.56□□□□□ -1.36
CDH17-201ENST00000027335 RNF17Q9BXT8 1623 aaKnown RBP6.56□□□□□ -1.36
CDH17-201ENST00000027335 ABCC5O15440 1437 aa6.56□□□□□ -1.36
CDH17-201ENST00000027335 POTEHQ6S545 545 aa6.55□□□□□ -1.36
CDH17-201ENST00000027335 CFAP44Q96MT7 982 aa6.55□□□□□ -1.36
CDH17-201ENST00000027335 CC2D1BQ5T0F9 858 aaKnown RBP6.55□□□□□ -1.36
CDH17-201ENST00000027335 MIA2Q96PC5 1412 aa6.55□□□□□ -1.36
CDH17-201ENST00000027335 MYO3AQ8NEV4 1616 aa6.55□□□□□ -1.36
CDH17-201ENST00000027335 PTPN23Q9H3S7 1636 aa6.55□□□□□ -1.36
CDH17-201ENST00000027335 HFM1A2PYH4 1435 aa6.55□□□□□ -1.36
CDH17-201ENST00000027335 DIP2CQ9Y2E4 1556 aa6.54□□□□□ -1.36
CDH17-201ENST00000027335 GPATCH8Q9UKJ3 1502 aaKnown RBP6.54□□□□□ -1.36
CDH17-201ENST00000027335 MLH3Q9UHC1 1453 aa6.54□□□□□ -1.36
CDH17-201ENST00000027335 AAMPQ13685 434 aa6.54□□□□□ -1.36
CDH17-201ENST00000027335 SCAPERQ9BY12 1400 aa6.54□□□□□ -1.36
CDH17-201ENST00000027335 CAMSAP2Q08AD1 1489 aa6.54□□□□□ -1.36
CDH17-201ENST00000027335 MYO5CQ9NQX4 1742 aa6.54□□□□□ -1.36
CDH17-201ENST00000027335 ALKQ9UM73 1620 aa6.53□□□□□ -1.36
CDH17-201ENST00000027335 WDR43Q15061 677 aaKnown RBP eCLIP6.53□□□□□ -1.36
CDH17-201ENST00000027335 WASHC2CQ9Y4E1 1318 aa6.53□□□□□ -1.36
CDH17-201ENST00000027335 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP6.53□□□□□ -1.36
CDH17-201ENST00000027335 SAFB2Q14151 953 aaKnown RBP eCLIP6.53□□□□□ -1.36
CDH17-201ENST00000027335 B4GALNT3Q6L9W6 998 aa6.53□□□□□ -1.36
CDH17-201ENST00000027335 RTL5Q5HYW3 569 aaPredicted RBP6.52□□□□□ -1.37
CDH17-201ENST00000027335 KIF14Q15058 1648 aa6.52□□□□□ -1.37
CDH17-201ENST00000027335 CCER2I3L3R5 266 aa6.52□□□□□ -1.37
CDH17-201ENST00000027335 TNNT2P45379 298 aaPredicted RBP6.52□□□□□ -1.37
CDH17-201ENST00000027335 MED14O60244 1454 aa6.52□□□□□ -1.37
CDH17-201ENST00000027335 CAMSAP1Q5T5Y3 1602 aa6.51□□□□□ -1.37
CDH17-201ENST00000027335 ZNF518AQ6AHZ1 1483 aa6.51□□□□□ -1.37
CDH17-201ENST00000027335 NBPF8Q3BBV2 869 aa6.51□□□□□ -1.37
CDH17-201ENST00000027335 KANK1Q14678 1352 aa6.51□□□□□ -1.37
CDH17-201ENST00000027335 RSPH6AQ9H0K4 717 aa6.51□□□□□ -1.37
CDH17-201ENST00000027335 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP6.51□□□□□ -1.37
CDH17-201ENST00000027335 NEUROD2Q15784 382 aa6.51□□□□□ -1.37
CDH17-201ENST00000027335 CDK12Q9NYV4 1490 aaPredicted RBP6.5□□□□□ -1.37
CDH17-201ENST00000027335 KNSTRNQ9Y448 316 aa6.5□□□□□ -1.37
CDH17-201ENST00000027335 ITSN2Q9NZM3 1697 aa6.5□□□□□ -1.37
CDH17-201ENST00000027335 PLXNC1O60486 1568 aa6.5□□□□□ -1.37
CDH17-201ENST00000027335 VWDEQ8N2E2 1590 aa6.5□□□□□ -1.37
CDH17-201ENST00000027335 CEP170BQ9Y4F5 1589 aaPredicted RBP6.5□□□□□ -1.37
CDH17-201ENST00000027335 STK26Q9P289 416 aa6.5□□□□□ -1.37
CDH17-201ENST00000027335 PLCH2O75038 1416 aa6.5□□□□□ -1.37
CDH17-201ENST00000027335 ANP32AP39687 249 aaKnown RBP6.49□□□□□ -1.37
CDH17-201ENST00000027335 PUS7Q96PZ0 661 aaKnown RBP6.49□□□□□ -1.37
CDH17-201ENST00000027335 ST20-MTHFSA0A0A6YYL1 179 aa6.49□□□□□ -1.37
CDH17-201ENST00000027335 ABCA6Q8N139 1617 aa6.49□□□□□ -1.37
CDH17-201ENST00000027335 NEURL4Q96JN8 1562 aa6.48□□□□□ -1.37
CDH17-201ENST00000027335 CCDC144AA2RUR9 1427 aa6.48□□□□□ -1.37
CDH17-201ENST00000027335 C1QBPQ07021 282 aaKnown RBP6.48□□□□□ -1.37
CDH17-201ENST00000027335 NEFMP07197 916 aa6.48□□□□□ -1.37
CDH17-201ENST00000027335 ROCK2O75116 1388 aaKnown RBP6.48□□□□□ -1.37
CDH17-201ENST00000027335 RBM10P98175 930 aaKnown RBP6.47□□□□□ -1.37
CDH17-201ENST00000027335 NBR1Q14596 966 aa6.47□□□□□ -1.37
CDH17-201ENST00000027335 NBPF1Q3BBV0 1214 aa6.47□□□□□ -1.37
CDH17-201ENST00000027335 PPP4R3CPQ6ZMV5 832 aa6.47□□□□□ -1.37
CDH17-201ENST00000027335 PLEKHH2Q8IVE3 1493 aa6.47□□□□□ -1.37
CDH17-201ENST00000027335 CCDC141Q6ZP82 1450 aa6.47□□□□□ -1.37
CDH17-201ENST00000027335 TMF1P82094 1093 aa6.46□□□□□ -1.37
CDH17-201ENST00000027335 A2ML1A8K2U0 1454 aa6.46□□□□□ -1.37
CDH17-201ENST00000027335 KDM5AP29375 1690 aaKnown RBP6.46□□□□□ -1.37
CDH17-201ENST00000027335 PPM1GO15355 546 aaPredicted RBP6.46□□□□□ -1.38
CDH17-201ENST00000027335 ROCK1Q13464 1354 aa6.46□□□□□ -1.38
CDH17-201ENST00000027335 SYCP2Q9BX26 1530 aa6.46□□□□□ -1.38
CDH17-201ENST00000027335 TRAK1Q9UPV9 953 aa6.46□□□□□ -1.38
CDH17-201ENST00000027335 PRKRIP1Q9H875 184 aaPredicted RBP6.45□□□□□ -1.38
CDH17-201ENST00000027335 PPP4R2Q9NY27 417 aa6.45□□□□□ -1.38
CDH17-201ENST00000027335 DHX30Q7L2E3 1194 aaKnown RBP eCLIP6.45□□□□□ -1.38
CDH17-201ENST00000027335 KIAA1107Q9UPP5 1409 aa6.45□□□□□ -1.38
CDH17-201ENST00000027335 ANKRD30BQ9BXX2 1392 aa6.45□□□□□ -1.38
CDH17-201ENST00000027335 DEKP35659 375 aaKnown RBP6.45□□□□□ -1.38
CDH17-201ENST00000027335 DNMT1P26358 1616 aaKnown RBP6.45□□□□□ -1.38
CDH17-201ENST00000027335 PREX2Q70Z35 1606 aa6.45□□□□□ -1.38
CDH17-201ENST00000027335 ADGBQ8N7X0 1667 aa6.44□□□□□ -1.38
CDH17-201ENST00000027335 WASHC2AQ641Q2 1341 aa6.44□□□□□ -1.38
CDH17-201ENST00000027335 TMEM132EQ6IEE7 984 aa6.44□□□□□ -1.38
CDH17-201ENST00000027335 ABCC1P33527 1531 aa6.44□□□□□ -1.38
CDH17-201ENST00000027335 ZBTB7CA1YPR0 619 aa6.44□□□□□ -1.38
CDH17-201ENST00000027335 SHANK2Q9UPX8 1470 aa6.44□□□□□ -1.38
CDH17-201ENST00000027335 KIDINS220Q9ULH0 1771 aa6.44□□□□□ -1.38
CDH17-201ENST00000027335 TSHZ2Q9NRE2 1034 aa6.44□□□□□ -1.38
CDH17-201ENST00000027335 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.44□□□□□ -1.38
CDH17-201ENST00000027335 KDM5DQ9BY66 1539 aa6.43□□□□□ -1.38
CDH17-201ENST00000027335 C11orf95C9JLR9 678 aaPredicted RBP6.43□□□□□ -1.38
CDH17-201ENST00000027335 CDCA8Q53HL2 280 aa6.43□□□□□ -1.38
CDH17-201ENST00000027335 CFAP70Q5T0N1 1121 aa6.43□□□□□ -1.38
CDH17-201ENST00000027335 POGKQ9P215 609 aa6.43□□□□□ -1.38
CDH17-201ENST00000027335 LRRIQ1Q96JM4 1722 aa6.43□□□□□ -1.38
CDH17-201ENST00000027335 USP47Q96K76 1375 aa6.43□□□□□ -1.38
CDH17-201ENST00000027335 ARID3AQ99856 593 aa6.43□□□□□ -1.38
CDH17-201ENST00000027335 RBM19Q9Y4C8 960 aaKnown RBP6.43□□□□□ -1.38
CDH17-201ENST00000027335 LRP5O75197 1615 aa6.43□□□□□ -1.38
CDH17-201ENST00000027335 TICAM2Q86XR7 235 aa6.43□□□□□ -1.38
CDH17-201ENST00000027335 ZC3H13Q5T200 1668 aaKnown RBP6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms