RNA–Protein interactions for RNA: ENSMUST00000223160.1

Trim9-211, Transcript of E3 ubiquitin-protein ligase TRIM9, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Trim9, Length 3,574 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9-211ENSMUST00000223160 ArxO35085 564 aa13.36□□□□□ -0.27
Trim9-211ENSMUST00000223160 Puf60Q3UEB3 564 aaKnown RBP13.36□□□□□ -0.27
Trim9-211ENSMUST00000223160 Speer4f1Q9D5Q6 258 aa13.36□□□□□ -0.27
Trim9-211ENSMUST00000223160 Ptch1Q61115 1434 aa13.35□□□□□ -0.27
Trim9-211ENSMUST00000223160 Nsd2Q8BVE8 1365 aa13.35□□□□□ -0.27
Trim9-211ENSMUST00000223160 Gapvd1Q6PAR5 1458 aa13.34□□□□□ -0.27
Trim9-211ENSMUST00000223160 NhsB1AV60 1647 aa13.33□□□□□ -0.27
Trim9-211ENSMUST00000223160 Adamts13Q769J6 1426 aa13.33□□□□□ -0.28
Trim9-211ENSMUST00000223160 Igf1rQ60751 1373 aa13.33□□□□□ -0.28
Trim9-211ENSMUST00000223160 Rnf17Q99MV7 1640 aa13.33□□□□□ -0.28
Trim9-211ENSMUST00000223160 Gm156Q58A37 223 aa13.32□□□□□ -0.28
Trim9-211ENSMUST00000223160 Liat1Q810M6 228 aa13.32□□□□□ -0.28
Trim9-211ENSMUST00000223160 Znf316Q6PGE4 1016 aa13.32□□□□□ -0.28
Trim9-211ENSMUST00000223160 Tulp4Q9JIL5 1547 aa13.3□□□□□ -0.28
Trim9-211ENSMUST00000223160 Gas2l2Q5SSG4 860 aa13.3□□□□□ -0.28
Trim9-211ENSMUST00000223160 Abcc6Q9R1S7 1498 aa13.3□□□□□ -0.28
Trim9-211ENSMUST00000223160 Mink1Q9JM52 1308 aa13.3□□□□□ -0.28
Trim9-211ENSMUST00000223160 Mast1Q9R1L5 1570 aa13.3□□□□□ -0.28
Trim9-211ENSMUST00000223160 Kidins220E9Q9B7 1793 aa13.29□□□□□ -0.28
Trim9-211ENSMUST00000223160 Abcc3B2RX12 1523 aa13.29□□□□□ -0.28
Trim9-211ENSMUST00000223160 Armcx1Q9CX83 456 aa13.29□□□□□ -0.28
Trim9-211ENSMUST00000223160 Cfap74Q3UY96 1578 aa13.28□□□□□ -0.28
Trim9-211ENSMUST00000223160 Exosc9Q9JHI7 438 aaKnown RBP13.28□□□□□ -0.28
Trim9-211ENSMUST00000223160 Kif1bQ60575 1816 aaKnown RBP13.28□□□□□ -0.28
Trim9-211ENSMUST00000223160 Abca8bQ8K440 1620 aa13.28□□□□□ -0.28
Trim9-211ENSMUST00000223160 Iqgap1Q9JKF1 1657 aaKnown RBP13.28□□□□□ -0.28
Trim9-211ENSMUST00000223160 Kif16bB1AVY7 1312 aa13.27□□□□□ -0.28
Trim9-211ENSMUST00000223160 Shq1Q7TMX5 569 aa13.27□□□□□ -0.28
Trim9-211ENSMUST00000223160 Kdm5cP41230 1554 aa13.27□□□□□ -0.28
Trim9-211ENSMUST00000223160 DroshaQ5HZJ0 1373 aaKnown RBP13.27□□□□□ -0.28
Trim9-211ENSMUST00000223160 Afap1Q80YS6 731 aa13.27□□□□□ -0.29
Trim9-211ENSMUST00000223160 ShprhQ7TPQ3 1674 aa13.27□□□□□ -0.29
Trim9-211ENSMUST00000223160 AatkQ80YE4 1365 aa13.27□□□□□ -0.29
Trim9-211ENSMUST00000223160 Atxn3Q9CVD2 355 aa13.27□□□□□ -0.29
Trim9-211ENSMUST00000223160 Q9D9H8 365 aa13.27□□□□□ -0.29
Trim9-211ENSMUST00000223160 Ylpm1Q9R0I7 1386 aaKnown RBP13.26□□□□□ -0.29
Trim9-211ENSMUST00000223160 Apaf1O88879 1249 aa13.26□□□□□ -0.29
Trim9-211ENSMUST00000223160 AU022751B1B0V2 589 aa13.25□□□□□ -0.29
Trim9-211ENSMUST00000223160 Plin1Q8CGN5 517 aa13.25□□□□□ -0.29
Trim9-211ENSMUST00000223160 Hdac5Q9Z2V6 1113 aa13.25□□□□□ -0.29
Trim9-211ENSMUST00000223160 Golga2Q921M4 999 aa13.24□□□□□ -0.29
Trim9-211ENSMUST00000223160 Zfyve16Q80U44 1528 aa13.24□□□□□ -0.29
Trim9-211ENSMUST00000223160 IqubQ8CDK3 788 aa13.24□□□□□ -0.29
Trim9-211ENSMUST00000223160 Cep170Q6A065 1588 aa13.23□□□□□ -0.29
Trim9-211ENSMUST00000223160 Col17a1Q07563 1470 aa13.23□□□□□ -0.29
Trim9-211ENSMUST00000223160 ChgaP26339 463 aaKnown RBP13.22□□□□□ -0.29
Trim9-211ENSMUST00000223160 NgefQ8CHT1 710 aa13.22□□□□□ -0.29
Trim9-211ENSMUST00000223160 Asxl2Q8BZ32 1370 aa13.22□□□□□ -0.29
Trim9-211ENSMUST00000223160 Xrn1P97789 1719 aaKnown RBP13.22□□□□□ -0.29
Trim9-211ENSMUST00000223160 Rab3gap2Q8BMG7 1366 aa13.22□□□□□ -0.29
Trim9-211ENSMUST00000223160 Pdcd11Q6NS46 1862 aaKnown RBP13.21□□□□□ -0.29
Trim9-211ENSMUST00000223160 OvosQ3UU35 1456 aa13.21□□□□□ -0.3
Trim9-211ENSMUST00000223160 Ccdc30Q8BVF4 654 aa13.21□□□□□ -0.3
Trim9-211ENSMUST00000223160 U2af1Q9D883 239 aaKnown RBP13.21□□□□□ -0.3
Trim9-211ENSMUST00000223160 Utp14aQ640M1 767 aaKnown RBP13.2□□□□□ -0.3
Trim9-211ENSMUST00000223160 Abca6Q8K441 1624 aa13.2□□□□□ -0.3
Trim9-211ENSMUST00000223160 Myo3aQ8K3H5 1613 aa13.2□□□□□ -0.3
Trim9-211ENSMUST00000223160 Egfem1Q8C088 590 aa13.2□□□□□ -0.3
Trim9-211ENSMUST00000223160 Tspyl2Q7TQI8 677 aa13.19□□□□□ -0.3
Trim9-211ENSMUST00000223160 Gm16486A0A1D5RMD1 1434 aa13.19□□□□□ -0.3
Trim9-211ENSMUST00000223160 Yeats2Q3TUF7 1407 aa13.19□□□□□ -0.3
Trim9-211ENSMUST00000223160 Nos1Q9Z0J4 1429 aa13.19□□□□□ -0.3
Trim9-211ENSMUST00000223160 4930567H17RikQ3V0K5 233 aa13.19□□□□□ -0.3
Trim9-211ENSMUST00000223160 Safb2Q80YR5 991 aaKnown RBP13.19□□□□□ -0.3
Trim9-211ENSMUST00000223160 Pank1Q8K4K6 548 aa13.19□□□□□ -0.3
Trim9-211ENSMUST00000223160 Abca9Q8K449 1623 aa13.18□□□□□ -0.3
Trim9-211ENSMUST00000223160 Rwdd1Q9CQK7 243 aa13.18□□□□□ -0.3
Trim9-211ENSMUST00000223160 Robo2Q7TPD3 1470 aa13.18□□□□□ -0.3
Trim9-211ENSMUST00000223160 P2rx7Q9Z1M0 595 aa13.17□□□□□ -0.3
Trim9-211ENSMUST00000223160 Kank1E9Q238 1360 aa13.17□□□□□ -0.3
Trim9-211ENSMUST00000223160 Zmym4A2A791 1549 aaKnown RBP13.16□□□□□ -0.3
Trim9-211ENSMUST00000223160 Gli2Q0VGT2 1544 aa13.16□□□□□ -0.3
Trim9-211ENSMUST00000223160 Znf330Q922H9 316 aa13.16□□□□□ -0.3
Trim9-211ENSMUST00000223160 Ppip5k1A2ARP1 1436 aa13.16□□□□□ -0.3
Trim9-211ENSMUST00000223160 Ak9G3UYQ4 1894 aa13.15□□□□□ -0.3
Trim9-211ENSMUST00000223160 Birc3O08863 600 aa13.15□□□□□ -0.3
Trim9-211ENSMUST00000223160 Cfap65Q3V0B4 1847 aa13.15□□□□□ -0.3
Trim9-211ENSMUST00000223160 Depdc5P61460 1591 aa13.15□□□□□ -0.3
Trim9-211ENSMUST00000223160 Tsen2Q6P7W5 460 aa13.15□□□□□ -0.3
Trim9-211ENSMUST00000223160 Upf2A2AT37 1269 aaKnown RBP13.14□□□□□ -0.31
Trim9-211ENSMUST00000223160 Dnajc5gQ8C632 165 aa13.14□□□□□ -0.31
Trim9-211ENSMUST00000223160 Znf518aB2RRF6 1478 aaKnown RBP13.14□□□□□ -0.31
Trim9-211ENSMUST00000223160 Atp2b2Q9R0K7 1198 aa13.14□□□□□ -0.31
Trim9-211ENSMUST00000223160 Ttll13A4Q9F6 804 aa13.13□□□□□ -0.31
Trim9-211ENSMUST00000223160 Ksr2Q3UVC0 959 aa13.13□□□□□ -0.31
Trim9-211ENSMUST00000223160 Adgrl3Q80TS3 1537 aa13.13□□□□□ -0.31
Trim9-211ENSMUST00000223160 GsdmaQ9EST1 446 aa13.13□□□□□ -0.31
Trim9-211ENSMUST00000223160 Hecw1Q8K4P8 1604 aa13.12□□□□□ -0.31
Trim9-211ENSMUST00000223160 AnkarA2RT91 1465 aa13.11□□□□□ -0.31
Trim9-211ENSMUST00000223160 Txndc2Q6P902 515 aa13.11□□□□□ -0.31
Trim9-211ENSMUST00000223160 Chmp5Q9D7S9 219 aa13.11□□□□□ -0.31
Trim9-211ENSMUST00000223160 Myo5cE9Q1F5 1742 aa13.1□□□□□ -0.31
Trim9-211ENSMUST00000223160 Tex14Q7M6U3 1450 aa13.1□□□□□ -0.31
Trim9-211ENSMUST00000223160 Cluap1Q8R3P7 413 aa13.1□□□□□ -0.31
Trim9-211ENSMUST00000223160 Kiaa1107Q80TK0 1369 aa13.1□□□□□ -0.31
Trim9-211ENSMUST00000223160 Plch2A2AP18 1501 aa13.1□□□□□ -0.31
Trim9-211ENSMUST00000223160 DiexfQ8BTT6 772 aaKnown RBP13.1□□□□□ -0.31
Trim9-211ENSMUST00000223160 Irx6Q9ER75 438 aa13.09□□□□□ -0.31
Trim9-211ENSMUST00000223160 Pcdh10E9PXQ7 1057 aa13.09□□□□□ -0.31
Trim9-211ENSMUST00000223160 Ppp1r3fQ9JIG4 799 aa13.09□□□□□ -0.31
Retrieved 100 of 22,080 RNA–protein pairs in 14.3 ms