RNA–Protein interactions for RNA: ENSMUST00000199896.1

Smarcc1-207, Transcript of SWI/SNF complex subunit SMARCC1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Smarcc1, Length 5,773 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc1-207ENSMUST00000199896 Kri1Q8VDQ9 704 aaKnown RBP22.04■■□□□ 1.12
Smarcc1-207ENSMUST00000199896 Q8C5K5 320 aa22.04■■□□□ 1.12
Smarcc1-207ENSMUST00000199896 Rsph3aQ3UFY4 516 aa22.03■■□□□ 1.12
Smarcc1-207ENSMUST00000199896 BcanQ61361 883 aa22.02■■□□□ 1.12
Smarcc1-207ENSMUST00000199896 Nectin2P32507 530 aa22.02■■□□□ 1.12
Smarcc1-207ENSMUST00000199896 Map3k5O35099 1380 aa22.02■■□□□ 1.12
Smarcc1-207ENSMUST00000199896 Trim58Q5NCC9 485 aa22.01■■□□□ 1.11
Smarcc1-207ENSMUST00000199896 Rpgrip1lQ8CG73 1264 aa22.01■■□□□ 1.11
Smarcc1-207ENSMUST00000199896 Gnai1B2RSH2 354 aa22.01■■□□□ 1.11
Smarcc1-207ENSMUST00000199896 Gnai3Q9DC51 354 aa22.01■■□□□ 1.11
Smarcc1-207ENSMUST00000199896 Cplx2P84086 134 aa22.01■■□□□ 1.11
Smarcc1-207ENSMUST00000199896 Gm10471E9Q1C7 252 aa22.01■■□□□ 1.11
Smarcc1-207ENSMUST00000199896 Nap1l3Q794H2 544 aa22.01■■□□□ 1.11
Smarcc1-207ENSMUST00000199896 Cfdp1O88271 295 aaKnown RBP22■■□□□ 1.11
Smarcc1-207ENSMUST00000199896 Urb2E9Q7L1 1524 aaKnown RBP22■■□□□ 1.11
Smarcc1-207ENSMUST00000199896 Prdm16A2A935 1275 aa22■■□□□ 1.11
Smarcc1-207ENSMUST00000199896 Eva1cP58659 440 aa22■■□□□ 1.11
Smarcc1-207ENSMUST00000199896 Rfx1P48377 963 aa21.99■■□□□ 1.11
Smarcc1-207ENSMUST00000199896 Tpm3P21107 285 aaKnown RBP21.99■■□□□ 1.11
Smarcc1-207ENSMUST00000199896 Ccdc30Q8BVF4 654 aa21.99■■□□□ 1.11
Smarcc1-207ENSMUST00000199896 PnisrA2AJT4 805 aaKnown RBP21.98■■□□□ 1.11
Smarcc1-207ENSMUST00000199896 Zpr1Q62384 459 aa21.98■■□□□ 1.11
Smarcc1-207ENSMUST00000199896 Swt1Q9DBQ9 907 aa21.98■■□□□ 1.11
Smarcc1-207ENSMUST00000199896 Kiaa0754Q69ZZ9 979 aa21.98■■□□□ 1.11
Smarcc1-207ENSMUST00000199896 Efcab5A0JP43 1406 aa21.97■■□□□ 1.11
Smarcc1-207ENSMUST00000199896 Rbm25B2RY56 838 aaKnown RBP21.97■■□□□ 1.11
Smarcc1-207ENSMUST00000199896 Ddx11Q6AXC6 880 aa21.97■■□□□ 1.11
Smarcc1-207ENSMUST00000199896 CrcpO35427 148 aa21.97■■□□□ 1.11
Smarcc1-207ENSMUST00000199896 FanciQ8K368 1330 aa21.97■■□□□ 1.11
Smarcc1-207ENSMUST00000199896 Nutm1Q8BHP2 1126 aa21.96■■□□□ 1.11
Smarcc1-207ENSMUST00000199896 Sh3bgrQ9WUZ7 214 aa21.96■■□□□ 1.11
Smarcc1-207ENSMUST00000199896 Phactr2B1AVP0 632 aa21.95■■□□□ 1.1
Smarcc1-207ENSMUST00000199896 Cspp1B2RX88 1205 aa21.95■■□□□ 1.1
Smarcc1-207ENSMUST00000199896 Cux1P53564 1515 aa21.94■■□□□ 1.1
Smarcc1-207ENSMUST00000199896 Casq1O09165 405 aa21.94■■□□□ 1.1
Smarcc1-207ENSMUST00000199896 Ccp110Q7TSH4 1004 aa21.94■■□□□ 1.1
Smarcc1-207ENSMUST00000199896 Chmp4cQ9D7F7 232 aa21.94■■□□□ 1.1
Smarcc1-207ENSMUST00000199896 Q9D2X8 372 aa21.93■■□□□ 1.1
Smarcc1-207ENSMUST00000199896 Zranb3Q6NZP1 1069 aa21.93■■□□□ 1.1
Smarcc1-207ENSMUST00000199896 NexnQ7TPW1 607 aa21.93■■□□□ 1.1
Smarcc1-207ENSMUST00000199896 Evi5lH3BKQ3 813 aa21.93■■□□□ 1.1
Smarcc1-207ENSMUST00000199896 Sv2bQ8BG39 683 aa21.93■■□□□ 1.1
Smarcc1-207ENSMUST00000199896 Tnnt2P50752 301 aa21.92■■□□□ 1.1
Smarcc1-207ENSMUST00000199896 ScribQ80U72 1612 aa21.92■■□□□ 1.1
Smarcc1-207ENSMUST00000199896 Pank1Q8K4K6 548 aa21.92■■□□□ 1.1
Smarcc1-207ENSMUST00000199896 Rnf20Q5DTM8 973 aa21.91■■□□□ 1.1
Smarcc1-207ENSMUST00000199896 Evc2Q8K1G2 1220 aa21.91■■□□□ 1.1
Smarcc1-207ENSMUST00000199896 Arhgap5P97393 1501 aa21.91■■□□□ 1.1
Smarcc1-207ENSMUST00000199896 KinQ8K339 391 aa21.91■■□□□ 1.1
Smarcc1-207ENSMUST00000199896 Cplx1P63040 134 aa21.91■■□□□ 1.1
Smarcc1-207ENSMUST00000199896 Ak7Q9D2H2 614 aa21.91■■□□□ 1.1
Smarcc1-207ENSMUST00000199896 Sf3b2Q3UJB0 878 aaKnown RBP21.9■■□□□ 1.1
Smarcc1-207ENSMUST00000199896 Srek1Q8BZX4 494 aaKnown RBP21.9■■□□□ 1.1
Smarcc1-207ENSMUST00000199896 Hmox1P14901 289 aa21.9■■□□□ 1.1
Smarcc1-207ENSMUST00000199896 Trim30aP15533 496 aa21.89■■□□□ 1.1
Smarcc1-207ENSMUST00000199896 Arhgap31A6X8Z5 1425 aa21.89■■□□□ 1.09
Smarcc1-207ENSMUST00000199896 Mphosph10Q810V0 681 aaKnown RBP21.89■■□□□ 1.09
Smarcc1-207ENSMUST00000199896 Polr3gQ6NXY9 223 aa21.88■■□□□ 1.09
Smarcc1-207ENSMUST00000199896 Cd109Q8R422 1442 aa21.88■■□□□ 1.09
Smarcc1-207ENSMUST00000199896 Top2aQ01320 1528 aaKnown RBP21.87■■□□□ 1.09
Smarcc1-207ENSMUST00000199896 Rrp12Q6P5B0 1295 aaKnown RBP21.87■■□□□ 1.09
Smarcc1-207ENSMUST00000199896 FosbP13346 338 aa21.86■■□□□ 1.09
Smarcc1-207ENSMUST00000199896 Erc2Q6PH08 957 aa21.86■■□□□ 1.09
Smarcc1-207ENSMUST00000199896 Polr1aO35134 1717 aaKnown RBP21.86■■□□□ 1.09
Smarcc1-207ENSMUST00000199896 Ankrd36D3Z4K0 1415 aa21.86■■□□□ 1.09
Smarcc1-207ENSMUST00000199896 Afap1Q80YS6 731 aa21.85■■□□□ 1.09
Smarcc1-207ENSMUST00000199896 PhaxQ9JJT9 385 aaKnown RBP21.85■■□□□ 1.09
Smarcc1-207ENSMUST00000199896 Ddx54Q8K4L0 874 aaKnown RBP21.85■■□□□ 1.09
Smarcc1-207ENSMUST00000199896 Ift140E9PY46 1464 aa21.85■■□□□ 1.09
Smarcc1-207ENSMUST00000199896 Tpm4Q6IRU2 248 aa21.85■■□□□ 1.09
Smarcc1-207ENSMUST00000199896 Bicd2Q921C5 820 aa21.85■■□□□ 1.09
Smarcc1-207ENSMUST00000199896 Bcl11aQ9QYE3 773 aa21.85■■□□□ 1.09
Smarcc1-207ENSMUST00000199896 Sytl4Q9R0Q1 673 aa21.85■■□□□ 1.09
Smarcc1-207ENSMUST00000199896 Tpm2P58774 284 aa21.84■■□□□ 1.09
Smarcc1-207ENSMUST00000199896 MpripP97434 1024 aa21.84■■□□□ 1.09
Smarcc1-207ENSMUST00000199896 Gabpb2P81069 414 aa21.84■■□□□ 1.09
Smarcc1-207ENSMUST00000199896 Smg7Q5RJH6 1138 aaKnown RBP21.84■■□□□ 1.09
Smarcc1-207ENSMUST00000199896 Gnl3lQ6PGG6 577 aaKnown RBP21.84■■□□□ 1.09
Smarcc1-207ENSMUST00000199896 Noc3lQ8VI84 807 aaKnown RBP21.84■■□□□ 1.09
Smarcc1-207ENSMUST00000199896 Utp3Q9JI13 469 aaKnown RBP21.84■■□□□ 1.09
Smarcc1-207ENSMUST00000199896 Tpm1P58771 284 aa21.83■■□□□ 1.09
Smarcc1-207ENSMUST00000199896 Q7TT23 1179 aa21.83■■□□□ 1.08
Smarcc1-207ENSMUST00000199896 HypkQ9CR41 129 aa21.83■■□□□ 1.08
Smarcc1-207ENSMUST00000199896 Kif16bB1AVY7 1312 aa21.82■■□□□ 1.08
Smarcc1-207ENSMUST00000199896 Rec8Q8C5S7 591 aa21.82■■□□□ 1.08
Smarcc1-207ENSMUST00000199896 Duox2A2AQ99 1517 aa21.82■■□□□ 1.08
Smarcc1-207ENSMUST00000199896 Smc3Q9CW03 1217 aaKnown RBP21.82■■□□□ 1.08
Smarcc1-207ENSMUST00000199896 Wdr78E9PYY5 807 aa21.82■■□□□ 1.08
Smarcc1-207ENSMUST00000199896 Rbm5Q91YE7 815 aaKnown RBP21.82■■□□□ 1.08
Smarcc1-207ENSMUST00000199896 Cnnm1Q0GA42 951 aa21.81■■□□□ 1.08
Smarcc1-207ENSMUST00000199896 Becn1O88597 448 aa21.81■■□□□ 1.08
Smarcc1-207ENSMUST00000199896 Odf2A3KGV1 830 aaKnown RBP21.8■■□□□ 1.08
Smarcc1-207ENSMUST00000199896 KarsQ99MN1 595 aaKnown RBP21.8■■□□□ 1.08
Smarcc1-207ENSMUST00000199896 Vps8Q0P5W1 1427 aa21.79■■□□□ 1.08
Smarcc1-207ENSMUST00000199896 Apaf1O88879 1249 aa21.79■■□□□ 1.08
Smarcc1-207ENSMUST00000199896 Ccdc43Q9CR29 222 aaKnown RBP21.79■■□□□ 1.08
Smarcc1-207ENSMUST00000199896 Glipr1l2Q9CQ35 332 aa21.79■■□□□ 1.08
Smarcc1-207ENSMUST00000199896 Stk3Q9JI10 497 aa21.79■■□□□ 1.08
Smarcc1-207ENSMUST00000199896 Fgd6Q69ZL1 1399 aa21.78■■□□□ 1.08
Smarcc1-207ENSMUST00000199896 AampJ3QN89 436 aa21.78■■□□□ 1.08
Retrieved 100 of 22,080 RNA–protein pairs in 29.8 ms