RNA–Protein interactions for RNA: ENSMUST00000107935.7

Shank1-202, Transcript of SH3 and multiple ankyrin repeat domains protein 1, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Shank1, Length 6,649 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shank1-202ENSMUST00000107935 Pdia4P08003 638 aaKnown RBP18.23■□□□□ 0.51
Shank1-202ENSMUST00000107935 Kif7B7ZNG0 1348 aa18.23■□□□□ 0.51
Shank1-202ENSMUST00000107935 HmmrQ00547 794 aaKnown RBP18.23■□□□□ 0.51
Shank1-202ENSMUST00000107935 Ttll13A4Q9F6 804 aa18.23■□□□□ 0.51
Shank1-202ENSMUST00000107935 Pibf1E9Q6K3 756 aa18.22■□□□□ 0.51
Shank1-202ENSMUST00000107935 Rock1P70335 1354 aa18.22■□□□□ 0.51
Shank1-202ENSMUST00000107935 Vps53Q8CCB4 832 aa18.22■□□□□ 0.51
Shank1-202ENSMUST00000107935 Chmp4cQ9D7F7 232 aa18.21■□□□□ 0.51
Shank1-202ENSMUST00000107935 Trim58Q5NCC9 485 aa18.21■□□□□ 0.51
Shank1-202ENSMUST00000107935 Krt82Q99M74 516 aa18.21■□□□□ 0.51
Shank1-202ENSMUST00000107935 Tmco3Q8BH01 678 aa18.21■□□□□ 0.51
Shank1-202ENSMUST00000107935 Kif15Q6P9L6 1387 aa18.21■□□□□ 0.51
Shank1-202ENSMUST00000107935 Stk26Q99JT2 416 aa18.21■□□□□ 0.51
Shank1-202ENSMUST00000107935 KarsQ99MN1 595 aaKnown RBP18.21■□□□□ 0.51
Shank1-202ENSMUST00000107935 Ddx11Q6AXC6 880 aa18.2■□□□□ 0.5
Shank1-202ENSMUST00000107935 Trak1Q6PD31 939 aa18.2■□□□□ 0.5
Shank1-202ENSMUST00000107935 Atl3Q91YH5 541 aa18.2■□□□□ 0.5
Shank1-202ENSMUST00000107935 Slc4a1apE9PX68 744 aa18.2■□□□□ 0.5
Shank1-202ENSMUST00000107935 G3bp1P97855 465 aaKnown RBP18.19■□□□□ 0.5
Shank1-202ENSMUST00000107935 Odf2A3KGV1 830 aaKnown RBP18.19■□□□□ 0.5
Shank1-202ENSMUST00000107935 Olfml1Q8BSH2 233 aa18.19■□□□□ 0.5
Shank1-202ENSMUST00000107935 AppP12023 770 aa18.19■□□□□ 0.5
Shank1-202ENSMUST00000107935 PdcQ9QW08 244 aa18.18■□□□□ 0.5
Shank1-202ENSMUST00000107935 OptnQ8K3K8 584 aa18.18■□□□□ 0.5
Shank1-202ENSMUST00000107935 Wdr78E9PYY5 807 aa18.18■□□□□ 0.5
Shank1-202ENSMUST00000107935 Cbx1P83917 185 aaKnown RBP18.18■□□□□ 0.5
Shank1-202ENSMUST00000107935 Cplx1P63040 134 aa18.18■□□□□ 0.5
Shank1-202ENSMUST00000107935 Tnpo1Q8BFY9 898 aaKnown RBP18.18■□□□□ 0.5
Shank1-202ENSMUST00000107935 Tsen2Q6P7W5 460 aa18.17■□□□□ 0.5
Shank1-202ENSMUST00000107935 Ppp1r18Q8BQ30 594 aa18.17■□□□□ 0.5
Shank1-202ENSMUST00000107935 Pank3Q8R2W9 370 aa18.17■□□□□ 0.5
Shank1-202ENSMUST00000107935 Gtf3c5Q8R2T8 520 aa18.17■□□□□ 0.5
Shank1-202ENSMUST00000107935 CastP51125 788 aa18.17■□□□□ 0.5
Shank1-202ENSMUST00000107935 Cplx2P84086 134 aa18.17■□□□□ 0.5
Shank1-202ENSMUST00000107935 Cep112Q5PR68 954 aa18.17■□□□□ 0.5
Shank1-202ENSMUST00000107935 FosbP13346 338 aa18.16■□□□□ 0.5
Shank1-202ENSMUST00000107935 Ccdc102aQ3TMW1 549 aa18.16■□□□□ 0.5
Shank1-202ENSMUST00000107935 Rnf20Q5DTM8 973 aa18.16■□□□□ 0.5
Shank1-202ENSMUST00000107935 Nol12Q8BG17 217 aa18.15■□□□□ 0.5
Shank1-202ENSMUST00000107935 Ppp2r3aB2RXC8 1150 aa18.15■□□□□ 0.5
Shank1-202ENSMUST00000107935 Znf710Q3U288 666 aa18.15■□□□□ 0.5
Shank1-202ENSMUST00000107935 Ccdc83Q9D4V3 305 aa18.15■□□□□ 0.5
Shank1-202ENSMUST00000107935 Tceal9Q9DD24 104 aa18.15■□□□□ 0.5
Shank1-202ENSMUST00000107935 Nap1l1P28656 391 aaKnown RBP18.15■□□□□ 0.5
Shank1-202ENSMUST00000107935 Cep162Q6ZQ06 1403 aa18.15■□□□□ 0.5
Shank1-202ENSMUST00000107935 Srcin1Q9QWI6 1250 aa18.14■□□□□ 0.5
Shank1-202ENSMUST00000107935 Ccar2Q8VDP4 922 aaKnown RBP18.14■□□□□ 0.49
Shank1-202ENSMUST00000107935 Ccdc43Q9CR29 222 aaKnown RBP18.14■□□□□ 0.49
Shank1-202ENSMUST00000107935 Necab1Q8BG18 352 aa18.13■□□□□ 0.49
Shank1-202ENSMUST00000107935 AcrbpQ3V140 540 aa18.13■□□□□ 0.49
Shank1-202ENSMUST00000107935 Fmnl2A2APV2 1086 aa18.13■□□□□ 0.49
Shank1-202ENSMUST00000107935 Dusp27Q148W8 1138 aa18.13■□□□□ 0.49
Shank1-202ENSMUST00000107935 Triml2E9PW10 424 aa18.12■□□□□ 0.49
Shank1-202ENSMUST00000107935 NefhP19246 1090 aa18.12■□□□□ 0.49
Shank1-202ENSMUST00000107935 Frmd3Q8BHD4 595 aa18.12■□□□□ 0.49
Shank1-202ENSMUST00000107935 Trim30cD3YVI9 513 aa18.12■□□□□ 0.49
Shank1-202ENSMUST00000107935 Kif27Q7M6Z4 1394 aa18.12■□□□□ 0.49
Shank1-202ENSMUST00000107935 Usp48Q3V0C5 1052 aa18.12■□□□□ 0.49
Shank1-202ENSMUST00000107935 Baz1aO88379 1555 aa18.11■□□□□ 0.49
Shank1-202ENSMUST00000107935 Cchcr1Q8K2I2 770 aa18.11■□□□□ 0.49
Shank1-202ENSMUST00000107935 Dhx8A2A4P0 1244 aaKnown RBP18.11■□□□□ 0.49
Shank1-202ENSMUST00000107935 1700010I14RikQ7TPG0 532 aa18.1■□□□□ 0.49
Shank1-202ENSMUST00000107935 Paf1Q8K2T8 535 aa18.1■□□□□ 0.49
Shank1-202ENSMUST00000107935 Cetn4Q8K4K1 168 aa18.1■□□□□ 0.49
Shank1-202ENSMUST00000107935 Q9D2X8 372 aa18.1■□□□□ 0.49
Shank1-202ENSMUST00000107935 Hmox1P14901 289 aa18.1■□□□□ 0.49
Shank1-202ENSMUST00000107935 Nek4Q9Z1J2 792 aa18.1■□□□□ 0.49
Shank1-202ENSMUST00000107935 Ift57Q8BXG3 429 aa18.1■□□□□ 0.49
Shank1-202ENSMUST00000107935 Spag5Q7TME2 1165 aa18.1■□□□□ 0.49
Shank1-202ENSMUST00000107935 Ints3Q7TPD0 1041 aaKnown RBP18.09■□□□□ 0.49
Shank1-202ENSMUST00000107935 Cc2d1aQ8K1A6 943 aa18.09■□□□□ 0.49
Shank1-202ENSMUST00000107935 Sycp1Q62209 993 aa18.09■□□□□ 0.49
Shank1-202ENSMUST00000107935 Arglu1Q3UL36 271 aaKnown RBP18.09■□□□□ 0.49
Shank1-202ENSMUST00000107935 Ercc6F8VPZ5 1481 aa18.09■□□□□ 0.49
Shank1-202ENSMUST00000107935 Gbp4Q61107 620 aa18.09■□□□□ 0.49
Shank1-202ENSMUST00000107935 Otud6bQ8K2H2 294 aa18.09■□□□□ 0.49
Shank1-202ENSMUST00000107935 Ssh1Q76I79 1042 aa18.08■□□□□ 0.49
Shank1-202ENSMUST00000107935 Ncbp3Q8BZR9 615 aaKnown RBP18.08■□□□□ 0.49
Shank1-202ENSMUST00000107935 Ggt6Q6PDE7 497 aa18.08■□□□□ 0.49
Shank1-202ENSMUST00000107935 ItpripQ3TNL8 555 aa18.08■□□□□ 0.48
Shank1-202ENSMUST00000107935 Zkscan1Q8BGS3 561 aaKnown RBP18.08■□□□□ 0.48
Shank1-202ENSMUST00000107935 GsdmaQ9EST1 446 aa18.07■□□□□ 0.48
Shank1-202ENSMUST00000107935 Pank1Q8K4K6 548 aa18.07■□□□□ 0.48
Shank1-202ENSMUST00000107935 PhaxQ9JJT9 385 aaKnown RBP18.07■□□□□ 0.48
Shank1-202ENSMUST00000107935 Ppm1eQ80TL0 749 aa18.06■□□□□ 0.48
Shank1-202ENSMUST00000107935 Gprasp1Q5U4C1 1347 aa18.06■□□□□ 0.48
Shank1-202ENSMUST00000107935 Vgll3P85442 326 aa18.06■□□□□ 0.48
Shank1-202ENSMUST00000107935 AnlnQ8K298 1121 aaKnown RBP18.06■□□□□ 0.48
Shank1-202ENSMUST00000107935 Inpp5dQ9ES52 1191 aa18.06■□□□□ 0.48
Shank1-202ENSMUST00000107935 Esx1O88933 382 aa18.06■□□□□ 0.48
Shank1-202ENSMUST00000107935 Bag1Q60739 355 aa18.06■□□□□ 0.48
Shank1-202ENSMUST00000107935 Cabp1Q9JLK7 227 aa18.06■□□□□ 0.48
Shank1-202ENSMUST00000107935 March6Q6ZQ89 909 aa18.06■□□□□ 0.48
Shank1-202ENSMUST00000107935 Ccdc181Q80ZU5 509 aa18.06■□□□□ 0.48
Shank1-202ENSMUST00000107935 Cfap99A0A140LIX9 648 aa18.05■□□□□ 0.48
Shank1-202ENSMUST00000107935 Anapc15-psA0A140T8L6 141 aa18.05■□□□□ 0.48
Shank1-202ENSMUST00000107935 NcapgE9PWG6 1004 aa18.05■□□□□ 0.48
Shank1-202ENSMUST00000107935 Nup155Q99P88 1391 aaKnown RBP18.05■□□□□ 0.48
Shank1-202ENSMUST00000107935 Plekhh1Q80TI1 1356 aa18.03■□□□□ 0.48
Shank1-202ENSMUST00000107935 Hdgfl1Q2VPR5 283 aa18.03■□□□□ 0.48
Retrieved 100 of 22,080 RNA–protein pairs in 16.4 ms