RNA–Protein interactions for RNA: ENSMUST00000022327.12

Ldb3-201, Transcript of LIM domain-binding protein 3, mousemouse

APPRIS P4 TSL 1 (best) BASIC

Gene Ldb3, Length 5,119 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb3-201ENSMUST00000022327 Ccdc47Q9D024 483 aaKnown RBP15.12■□□□□ 0.01
Ldb3-201ENSMUST00000022327 Myom3A2ABU4 1439 aa15.12■□□□□ 0.01
Ldb3-201ENSMUST00000022327 FanciQ8K368 1330 aa15.12■□□□□ 0.01
Ldb3-201ENSMUST00000022327 Smc4Q8CG47 1286 aa15.12■□□□□ 0.01
Ldb3-201ENSMUST00000022327 Pabpn1Q8CCS6 302 aaKnown RBP15.12■□□□□ 0.01
Ldb3-201ENSMUST00000022327 Ccer1Q9CQL2 403 aa15.12■□□□□ 0.01
Ldb3-201ENSMUST00000022327 Grin2bQ01097 1482 aa15.11■□□□□ 0.01
Ldb3-201ENSMUST00000022327 Puf60Q3UEB3 564 aaKnown RBP15.11■□□□□ 0.01
Ldb3-201ENSMUST00000022327 KinQ8K339 391 aa15.11■□□□□ 0.01
Ldb3-201ENSMUST00000022327 Sf3a1Q8K4Z5 791 aaKnown RBP15.11■□□□□ 0.01
Ldb3-201ENSMUST00000022327 Swt1Q9DBQ9 907 aa15.11■□□□□ 0.01
Ldb3-201ENSMUST00000022327 Mroh2bQ7M6Y6 1581 aa15.11■□□□□ 0.01
Ldb3-201ENSMUST00000022327 Ush1cQ9ES64 910 aa15.1■□□□□ 0.01
Ldb3-201ENSMUST00000022327 Cd109Q8R422 1442 aa15.1■□□□□ 0.01
Ldb3-201ENSMUST00000022327 Plekhg5Q66T02 1073 aa15.1■□□□□ 0.01
Ldb3-201ENSMUST00000022327 Nap1l3Q794H2 544 aa15.1■□□□□ 0.01
Ldb3-201ENSMUST00000022327 Gm7298A0A0N4SVU1 1476 aa15.09■□□□□ 0.01
Ldb3-201ENSMUST00000022327 Ggt6Q6PDE7 497 aa15.09■□□□□ 0.01
Ldb3-201ENSMUST00000022327 PogzQ8BZH4 1409 aaKnown RBP15.09■□□□□ 0.01
Ldb3-201ENSMUST00000022327 Tceal9Q9DD24 104 aa15.09■□□□□ 0.01
Ldb3-201ENSMUST00000022327 Tiam1Q60610 1591 aa15.08■□□□□ 0
Ldb3-201ENSMUST00000022327 Rab3gap2Q8BMG7 1366 aa15.08■□□□□ 0
Ldb3-201ENSMUST00000022327 Zfp644E9QA22 1323 aa15.08■□□□□ 0
Ldb3-201ENSMUST00000022327 Arhgap31A6X8Z5 1425 aa15.08■□□□□ 0
Ldb3-201ENSMUST00000022327 Ccdc171E9Q1U1 1324 aa15.08■□□□□ 0
Ldb3-201ENSMUST00000022327 Il16O54824 1322 aa15.08■□□□□ 0
Ldb3-201ENSMUST00000022327 Kiaa0754Q69ZZ9 979 aa15.08■□□□□ 0
Ldb3-201ENSMUST00000022327 Trim30aP15533 496 aa15.07■□□□□ 0
Ldb3-201ENSMUST00000022327 Gtf3c3Q3TMP1 882 aa15.07■□□□□ 0
Ldb3-201ENSMUST00000022327 Eif2s2Q99L45 331 aaKnown RBP15.07■□□□□ 0
Ldb3-201ENSMUST00000022327 Urb2E9Q7L1 1524 aaKnown RBP15.07■□□□□ 0
Ldb3-201ENSMUST00000022327 Gsdma3Q5Y4Y6 464 aa15.07■□□□□ 0
Ldb3-201ENSMUST00000022327 Fam163aQ8CAA5 168 aa15.07■□□□□ 0
Ldb3-201ENSMUST00000022327 Triml2E9PW10 424 aa15.06■□□□□ 0
Ldb3-201ENSMUST00000022327 Slc4a2P13808 1237 aaKnown RBP15.06■□□□□ 0
Ldb3-201ENSMUST00000022327 Ric3Q8BPM6 367 aa15.06■□□□□ 0
Ldb3-201ENSMUST00000022327 Srek1Q8BZX4 494 aaKnown RBP15.06■□□□□ 0
Ldb3-201ENSMUST00000022327 Usp16Q99LG0 825 aa15.06■□□□□ 0
Ldb3-201ENSMUST00000022327 Ppp2r1aQ76MZ3 589 aa15.05■□□□□ 0
Ldb3-201ENSMUST00000022327 Rbm25B2RY56 838 aaKnown RBP15.05■□□□□ -0
Ldb3-201ENSMUST00000022327 Arhgap5P97393 1501 aa15.05■□□□□ -0
Ldb3-201ENSMUST00000022327 Cplx2P84086 134 aa15.05■□□□□ -0
Ldb3-201ENSMUST00000022327 Mcm2P97310 904 aa15.05■□□□□ -0
Ldb3-201ENSMUST00000022327 Pak3Q61036 559 aa15.04■□□□□ -0
Ldb3-201ENSMUST00000022327 MlecQ6ZQI3 291 aaKnown RBP15.04■□□□□ -0
Ldb3-201ENSMUST00000022327 Gm21190A0A0G2JGJ6 266 aa15.04■□□□□ -0
Ldb3-201ENSMUST00000022327 Rnf20Q5DTM8 973 aa15.04■□□□□ -0
Ldb3-201ENSMUST00000022327 Ccdc183A2AJB1 534 aa15.04■□□□□ -0
Ldb3-201ENSMUST00000022327 Tpd52l1O54818 204 aa15.04■□□□□ -0
Ldb3-201ENSMUST00000022327 Sh3bgrQ9WUZ7 214 aa15.04■□□□□ -0
Ldb3-201ENSMUST00000022327 Rfx1P48377 963 aa15.03■□□□□ -0
Ldb3-201ENSMUST00000022327 Chmp7Q8R1T1 451 aa15.03■□□□□ -0
Ldb3-201ENSMUST00000022327 Ttll13A4Q9F6 804 aa15.02■□□□□ -0
Ldb3-201ENSMUST00000022327 Ttll5Q8CHB8 1328 aa15.02■□□□□ -0
Ldb3-201ENSMUST00000022327 Ddx11Q6AXC6 880 aa15.02■□□□□ -0
Ldb3-201ENSMUST00000022327 Evc2Q8K1G2 1220 aa15.02■□□□□ -0
Ldb3-201ENSMUST00000022327 Pank1Q8K4K6 548 aa15.02□□□□□ -0.01
Ldb3-201ENSMUST00000022327 Tpm3P21107 285 aaKnown RBP15.01□□□□□ -0.01
Ldb3-201ENSMUST00000022327 PhaxQ9JJT9 385 aaKnown RBP15.01□□□□□ -0.01
Ldb3-201ENSMUST00000022327 Cavin4A2AMM0 362 aa15.01□□□□□ -0.01
Ldb3-201ENSMUST00000022327 Kif4P33174 1231 aa15.01□□□□□ -0.01
Ldb3-201ENSMUST00000022327 Zfp444Q3TDV8 331 aaKnown RBP15.01□□□□□ -0.01
Ldb3-201ENSMUST00000022327 Erc2Q6PH08 957 aa15.01□□□□□ -0.01
Ldb3-201ENSMUST00000022327 Atp2b2Q9R0K7 1198 aa15.01□□□□□ -0.01
Ldb3-201ENSMUST00000022327 Cc2d1aQ8K1A6 943 aa15□□□□□ -0.01
Ldb3-201ENSMUST00000022327 AppP12023 770 aa15□□□□□ -0.01
Ldb3-201ENSMUST00000022327 Q7TT23 1179 aa15□□□□□ -0.01
Ldb3-201ENSMUST00000022327 Gripap1Q8VD04 806 aa15□□□□□ -0.01
Ldb3-201ENSMUST00000022327 Q8BT18 775 aa14.99□□□□□ -0.01
Ldb3-201ENSMUST00000022327 Fgd6Q69ZL1 1399 aa14.99□□□□□ -0.01
Ldb3-201ENSMUST00000022327 SkilQ60665 675 aa14.99□□□□□ -0.01
Ldb3-201ENSMUST00000022327 KarsQ99MN1 595 aaKnown RBP14.99□□□□□ -0.01
Ldb3-201ENSMUST00000022327 Q9D2X8 372 aa14.99□□□□□ -0.01
Ldb3-201ENSMUST00000022327 Ppp2r3aB2RXC8 1150 aa14.98□□□□□ -0.01
Ldb3-201ENSMUST00000022327 A0A1L1SQF0 893 aa14.98□□□□□ -0.01
Ldb3-201ENSMUST00000022327 Cchcr1Q8K2I2 770 aa14.98□□□□□ -0.01
Ldb3-201ENSMUST00000022327 Washc2Q6PGL7 1334 aa14.98□□□□□ -0.01
Ldb3-201ENSMUST00000022327 Fyb1O35601 819 aa14.97□□□□□ -0.01
Ldb3-201ENSMUST00000022327 Ccdc141E9Q8Q6 1531 aa14.97□□□□□ -0.01
Ldb3-201ENSMUST00000022327 EprsQ8CGC7 1512 aaKnown RBP14.97□□□□□ -0.01
Ldb3-201ENSMUST00000022327 AqrQ8CFQ3 1481 aaKnown RBP14.97□□□□□ -0.01
Ldb3-201ENSMUST00000022327 Map3k5O35099 1380 aa14.97□□□□□ -0.01
Ldb3-201ENSMUST00000022327 Gpatch11Q3UFS4 262 aa14.97□□□□□ -0.01
Ldb3-201ENSMUST00000022327 Smc3Q9CW03 1217 aaKnown RBP14.97□□□□□ -0.01
Ldb3-201ENSMUST00000022327 Gm21969J3QJZ1 289 aa14.96□□□□□ -0.01
Ldb3-201ENSMUST00000022327 Sv2bQ8BG39 683 aa14.96□□□□□ -0.01
Ldb3-201ENSMUST00000022327 Tpm1P58771 284 aa14.96□□□□□ -0.02
Ldb3-201ENSMUST00000022327 Hoxa7P02830 229 aa14.95□□□□□ -0.02
Ldb3-201ENSMUST00000022327 1700010I14RikQ7TPG0 532 aa14.95□□□□□ -0.02
Ldb3-201ENSMUST00000022327 Phactr2B1AVP0 632 aa14.95□□□□□ -0.02
Ldb3-201ENSMUST00000022327 Cyp46a1Q9WVK8 500 aa14.95□□□□□ -0.02
Ldb3-201ENSMUST00000022327 Utp3Q9JI13 469 aaKnown RBP14.94□□□□□ -0.02
Ldb3-201ENSMUST00000022327 Ccdc173A0JLY1 547 aa14.94□□□□□ -0.02
Ldb3-201ENSMUST00000022327 PtprkP35822 1457 aa14.94□□□□□ -0.02
Ldb3-201ENSMUST00000022327 Dhx9O70133 1380 aaKnown RBP14.94□□□□□ -0.02
Ldb3-201ENSMUST00000022327 Kif3aP28741 701 aa14.94□□□□□ -0.02
Ldb3-201ENSMUST00000022327 Q9D9H8 365 aa14.94□□□□□ -0.02
Ldb3-201ENSMUST00000022327 Top2bQ64511 1612 aa14.94□□□□□ -0.02
Ldb3-201ENSMUST00000022327 CadpsQ80TJ1 1355 aa14.93□□□□□ -0.02
Ldb3-201ENSMUST00000022327 Frmpd1A2AKB4 1549 aa14.93□□□□□ -0.02
Retrieved 100 of 22,080 RNA–protein pairs in 26 ms