RNA–Protein interactions for RNA: ENSMUST00000012627.4

Rpa3-201, Transcript of Replication protein A 14 kDa subunit, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rpa3, Length 670 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa3-201ENSMUST00000012627 Krtap3-3Q9D7P0 99 aa13.91□□□□□ -0.18
Rpa3-201ENSMUST00000012627 PrimpolQ6P1E7 537 aa13.9□□□□□ -0.18
Rpa3-201ENSMUST00000012627 Wfs1P56695 890 aa13.85□□□□□ -0.19
Rpa3-201ENSMUST00000012627 Map3k9Q3U1V8 1077 aa13.85□□□□□ -0.19
Rpa3-201ENSMUST00000012627 Scube2Q9JJS0 997 aa13.85□□□□□ -0.19
Rpa3-201ENSMUST00000012627 Tmub1Q9JMG3 245 aa13.85□□□□□ -0.19
Rpa3-201ENSMUST00000012627 Irf5P56477 497 aa13.84□□□□□ -0.19
Rpa3-201ENSMUST00000012627 Cyp8b1O88962 500 aa13.83□□□□□ -0.2
Rpa3-201ENSMUST00000012627 Nos2P29477 1144 aa13.81□□□□□ -0.2
Rpa3-201ENSMUST00000012627 Cacna1iE9Q7P2 2199 aa13.81□□□□□ -0.2
Rpa3-201ENSMUST00000012627 Sulf1Q8K007 870 aa13.8□□□□□ -0.2
Rpa3-201ENSMUST00000012627 Wdr62Q3U3T8 1523 aa13.8□□□□□ -0.2
Rpa3-201ENSMUST00000012627 Suv39h2Q9EQQ0 477 aa13.79□□□□□ -0.2
Rpa3-201ENSMUST00000012627 Rsf1E9PWW9 1441 aaKnown RBP13.79□□□□□ -0.2
Rpa3-201ENSMUST00000012627 Cops2P61202 443 aaKnown RBP13.78□□□□□ -0.2
Rpa3-201ENSMUST00000012627 Gimap6Q8K349 305 aa13.78□□□□□ -0.2
Rpa3-201ENSMUST00000012627 Fmn1Q05860 1466 aa13.75□□□□□ -0.21
Rpa3-201ENSMUST00000012627 Phox2bO35690 314 aa13.75□□□□□ -0.21
Rpa3-201ENSMUST00000012627 Tsen34Q8BMZ5 316 aa13.75□□□□□ -0.21
Rpa3-201ENSMUST00000012627 Cc2d2aQ8CFW7 1633 aa13.75□□□□□ -0.21
Rpa3-201ENSMUST00000012627 Cngb1E1AZ71 1325 aa13.74□□□□□ -0.21
Rpa3-201ENSMUST00000012627 Ercc6F8VPZ5 1481 aa13.74□□□□□ -0.21
Rpa3-201ENSMUST00000012627 Scube3Q66PY1 993 aa13.73□□□□□ -0.21
Rpa3-201ENSMUST00000012627 Ccdc88bQ4QRL3 1481 aa13.73□□□□□ -0.21
Rpa3-201ENSMUST00000012627 OatP29758 439 aa13.72□□□□□ -0.21
Rpa3-201ENSMUST00000012627 Frmpd1A2AKB4 1549 aa13.71□□□□□ -0.21
Rpa3-201ENSMUST00000012627 MlecQ6ZQI3 291 aaKnown RBP13.71□□□□□ -0.21
Rpa3-201ENSMUST00000012627 Supt5hO55201 1082 aaKnown RBP13.7□□□□□ -0.22
Rpa3-201ENSMUST00000012627 Fkbp15Q6P9Q6 1216 aaKnown RBP13.7□□□□□ -0.22
Rpa3-201ENSMUST00000012627 Erbb4Q61527 1308 aa13.69□□□□□ -0.22
Rpa3-201ENSMUST00000012627 Thoc2B1AZI6 1594 aaKnown RBP13.69□□□□□ -0.22
Rpa3-201ENSMUST00000012627 TnnQ80Z71 1560 aa13.69□□□□□ -0.22
Rpa3-201ENSMUST00000012627 MsmpB1AWI6 139 aa13.67□□□□□ -0.22
Rpa3-201ENSMUST00000012627 Art1Q60935 325 aa13.67□□□□□ -0.22
Rpa3-201ENSMUST00000012627 Pcmtd1P59913 357 aa13.64□□□□□ -0.23
Rpa3-201ENSMUST00000012627 Map3k14Q9WUL6 942 aa13.64□□□□□ -0.23
Rpa3-201ENSMUST00000012627 Top2aQ01320 1528 aaKnown RBP13.64□□□□□ -0.23
Rpa3-201ENSMUST00000012627 TprnA2AI08 749 aaKnown RBP13.63□□□□□ -0.23
Rpa3-201ENSMUST00000012627 Unc13aQ4KUS2 1712 aa13.62□□□□□ -0.23
Rpa3-201ENSMUST00000012627 Lamc3Q9R0B6 1581 aa13.6□□□□□ -0.23
Rpa3-201ENSMUST00000012627 Atf4Q06507 349 aa13.59□□□□□ -0.23
Rpa3-201ENSMUST00000012627 PtpreP49446 699 aa13.58□□□□□ -0.24
Rpa3-201ENSMUST00000012627 Mei1Q9D4I2 1268 aa13.57□□□□□ -0.24
Rpa3-201ENSMUST00000012627 Tmem52Q9D702 196 aa13.57□□□□□ -0.24
Rpa3-201ENSMUST00000012627 Dbn1Q9QXS6 706 aa13.57□□□□□ -0.24
Rpa3-201ENSMUST00000012627 FcrlaQ920A9 352 aa13.56□□□□□ -0.24
Rpa3-201ENSMUST00000012627 Tpcn1Q9EQJ0 817 aa13.56□□□□□ -0.24
Rpa3-201ENSMUST00000012627 SowahcQ8C0J6 512 aa13.55□□□□□ -0.24
Rpa3-201ENSMUST00000012627 Themis2Q91YX0 663 aa13.55□□□□□ -0.24
Rpa3-201ENSMUST00000012627 Speer3W4VSP1 261 aa13.55□□□□□ -0.24
Rpa3-201ENSMUST00000012627 Cyp7a1Q64505 503 aa13.54□□□□□ -0.24
Rpa3-201ENSMUST00000012627 Plcg2Q8CIH5 1265 aa13.54□□□□□ -0.24
Rpa3-201ENSMUST00000012627 UvssaQ9D479 717 aa13.54□□□□□ -0.24
Rpa3-201ENSMUST00000012627 Sp7Q8VI67 428 aa13.53□□□□□ -0.24
Rpa3-201ENSMUST00000012627 Fam135aQ6NS59 1506 aa13.53□□□□□ -0.24
Rpa3-201ENSMUST00000012627 MarsQ68FL6 902 aaKnown RBP13.52□□□□□ -0.25
Rpa3-201ENSMUST00000012627 Zfp943Q6NZP4 507 aa13.52□□□□□ -0.25
Rpa3-201ENSMUST00000012627 Baz1bQ9Z277 1479 aa13.52□□□□□ -0.25
Rpa3-201ENSMUST00000012627 Pola2P33611 600 aa13.51□□□□□ -0.25
Rpa3-201ENSMUST00000012627 Zpr1Q62384 459 aa13.51□□□□□ -0.25
Rpa3-201ENSMUST00000012627 Ube3bQ9ES34 1070 aa13.51□□□□□ -0.25
Rpa3-201ENSMUST00000012627 Slc4a9E9PUP3 929 aa13.49□□□□□ -0.25
Rpa3-201ENSMUST00000012627 Usp26Q99MX1 835 aa13.49□□□□□ -0.25
Rpa3-201ENSMUST00000012627 Spaca7Q9D2S4 182 aa13.48□□□□□ -0.25
Rpa3-201ENSMUST00000012627 Phldb1Q6PDH0 1371 aaKnown RBP13.47□□□□□ -0.25
Rpa3-201ENSMUST00000012627 Nckap5lQ6GQX2 1323 aa13.47□□□□□ -0.25
Rpa3-201ENSMUST00000012627 Pla2g2cP48076 150 aa13.47□□□□□ -0.25
Rpa3-201ENSMUST00000012627 Rapgef2Q8CHG7 1496 aa13.47□□□□□ -0.25
Rpa3-201ENSMUST00000012627 Man1a2P39098 641 aa13.45□□□□□ -0.26
Rpa3-201ENSMUST00000012627 Cdv3Q4VAA2 281 aaKnown RBP13.45□□□□□ -0.26
Rpa3-201ENSMUST00000012627 Rpgrip1Q9EPQ2 1331 aa13.44□□□□□ -0.26
Rpa3-201ENSMUST00000012627 Ppfia1B2RXQ2 1266 aa13.44□□□□□ -0.26
Rpa3-201ENSMUST00000012627 Znf330Q922H9 316 aa13.44□□□□□ -0.26
Rpa3-201ENSMUST00000012627 Usp46P62069 366 aa13.43□□□□□ -0.26
Rpa3-201ENSMUST00000012627 Camsap1A2AHC3 1581 aa13.42□□□□□ -0.26
Rpa3-201ENSMUST00000012627 ColqO35348 457 aa13.42□□□□□ -0.26
Rpa3-201ENSMUST00000012627 Thsd4Q3UTY6 1018 aa13.42□□□□□ -0.26
Rpa3-201ENSMUST00000012627 AW822073A0A0N4SUK1 652 aa13.41□□□□□ -0.26
Rpa3-201ENSMUST00000012627 Hoxb4P10284 250 aa13.41□□□□□ -0.26
Rpa3-201ENSMUST00000012627 Adamts19P59509 1210 aa13.4□□□□□ -0.26
Rpa3-201ENSMUST00000012627 Dnajc14Q921R4 703 aa13.4□□□□□ -0.26
Rpa3-201ENSMUST00000012627 Eif4g1Q6NZJ6 1600 aaKnown RBP13.39□□□□□ -0.27
Rpa3-201ENSMUST00000012627 Trbv21A0A0A6YX06 97 aa13.39□□□□□ -0.27
Rpa3-201ENSMUST00000012627 Thap11Q9JJD0 305 aa13.39□□□□□ -0.27
Rpa3-201ENSMUST00000012627 Kif15Q6P9L6 1387 aa13.38□□□□□ -0.27
Rpa3-201ENSMUST00000012627 Dsg2O55111 1122 aa13.38□□□□□ -0.27
Rpa3-201ENSMUST00000012627 Spink5Q148R4 1017 aa13.38□□□□□ -0.27
Rpa3-201ENSMUST00000012627 Stk11ipQ3TAA7 1072 aa13.38□□□□□ -0.27
Rpa3-201ENSMUST00000012627 Slc30a10Q3UVU3 470 aa13.37□□□□□ -0.27
Rpa3-201ENSMUST00000012627 Hhipl2Q9D2G9 717 aa13.37□□□□□ -0.27
Rpa3-201ENSMUST00000012627 Setdb1O88974 1307 aa13.37□□□□□ -0.27
Rpa3-201ENSMUST00000012627 Foxj1Q61660 421 aa13.36□□□□□ -0.27
Rpa3-201ENSMUST00000012627 F11Q91Y47 624 aa13.36□□□□□ -0.27
Rpa3-201ENSMUST00000012627 FurinP23188 793 aa13.35□□□□□ -0.27
Rpa3-201ENSMUST00000012627 Ccdc18Q640L5 1455 aa13.35□□□□□ -0.27
Rpa3-201ENSMUST00000012627 Catsper2A2ARP9 588 aa13.34□□□□□ -0.27
Rpa3-201ENSMUST00000012627 Dsc3P55850 896 aa13.34□□□□□ -0.27
Rpa3-201ENSMUST00000012627 Mtfr1Q99MB2 328 aa13.34□□□□□ -0.27
Rpa3-201ENSMUST00000012627 Pnma5Q5DTT8 618 aa13.33□□□□□ -0.28
Rpa3-201ENSMUST00000012627 Pcdhb16Q91Y03 802 aa13.33□□□□□ -0.28
Retrieved 100 of 22,080 RNA–protein pairs in 7.3 ms