RNA–Protein interactions for RNA: YPL254W

HFI1, Transcript of Adaptor protein required for structural integrity of the SAGA complex, yeast

Gene HFI1, Length 1,467 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
HFI1	YPL254W	ATG8	P38182	117 aa	RIP-Chip data	4.75	□□□□□ -1.65	not detected
HFI1	YPL254W	GPI16	P38875	610 aa		4.75	□□□□□ -1.65
HFI1	YPL254W	SLZ1	P40167	298 aa		4.75	□□□□□ -1.65
HFI1	YPL254W	GTT1	P40582	234 aa		4.75	□□□□□ -1.65
HFI1	YPL254W	IDP2	P41939	412 aa		4.75	□□□□□ -1.65
HFI1	YPL254W	ADO1	P47143	340 aa	Known RBP	4.75	□□□□□ -1.65
HFI1	YPL254W	SOL1	P50278	321 aa		4.75	□□□□□ -1.65
HFI1	YPL254W	AAH1	P53909	347 aa		4.75	□□□□□ -1.65
HFI1	YPL254W	YMR279C	Q03263	540 aa		4.75	□□□□□ -1.65
HFI1	YPL254W	BNA5	Q05979	453 aa		4.75	□□□□□ -1.65
HFI1	YPL254W	SDO1	Q07953	250 aa	Known RBP	4.75	□□□□□ -1.65
HFI1	YPL254W	MIM1	Q08176	113 aa		4.75	□□□□□ -1.65
HFI1	YPL254W	MCT1	Q12283	360 aa		4.75	□□□□□ -1.65
HFI1	YPL254W	YDR034W-B	Q6Q5X2	51 aa		4.75	□□□□□ -1.65
HFI1	YPL254W	RPB3	P16370	318 aa	Known RBP	4.75	□□□□□ -1.65
HFI1	YPL254W	OLE1	P21147	510 aa	Known RBP	4.75	□□□□□ -1.65
HFI1	YPL254W	IMG1	P25626	169 aa		4.75	□□□□□ -1.65
HFI1	YPL254W	TRR1	P29509	319 aa	Known RBP	4.75	□□□□□ -1.65
HFI1	YPL254W	SEF1	P34228	1148 aa		4.75	□□□□□ -1.65
HFI1	YPL254W	COS9	P36034	407 aa		4.75	□□□□□ -1.65
HFI1	YPL254W	POG1	P40473	351 aa		4.75	□□□□□ -1.65
HFI1	YPL254W	VMA21	P41806	77 aa		4.75	□□□□□ -1.65
HFI1	YPL254W	YGR126W	P53274	230 aa		4.75	□□□□□ -1.65
HFI1	YPL254W	YLR460C	P54007	376 aa		4.75	□□□□□ -1.65
HFI1	YPL254W	ADD37	Q03233	198 aa		4.75	□□□□□ -1.65
HFI1	YPL254W	YDR102C	Q03864	110 aa		4.75	□□□□□ -1.65
HFI1	YPL254W	CTS2	Q06350	511 aa		4.75	□□□□□ -1.65
HFI1	YPL254W	IRC19	Q07843	230 aa		4.75	□□□□□ -1.65
HFI1	YPL254W	ZEO1	Q08245	113 aa		4.75	□□□□□ -1.65
HFI1	YPL254W	SRL2	Q12020	392 aa		4.75	□□□□□ -1.65
HFI1	YPL254W	UBA3	Q99344	299 aa		4.75	□□□□□ -1.65
HFI1	YPL254W	YPT1	P01123	206 aa	Known RBP	4.74	□□□□□ -1.65
HFI1	YPL254W	YEA6	P39953	335 aa		4.74	□□□□□ -1.65
HFI1	YPL254W	YPS6	P40583	537 aa		4.74	□□□□□ -1.65
HFI1	YPL254W	UFD1	P53044	361 aa		4.74	□□□□□ -1.65
HFI1	YPL254W	RHO5	P53879	331 aa	Known RBP	4.74	□□□□□ -1.65
HFI1	YPL254W	APJ1	P53940	528 aa		4.74	□□□□□ -1.65
HFI1	YPL254W	YCL001W-A	P87012	153 aa		4.74	□□□□□ -1.65
HFI1	YPL254W	VPS28	Q02767	242 aa		4.74	□□□□□ -1.65
HFI1	YPL254W	THI74	Q04083	370 aa		4.74	□□□□□ -1.65
HFI1	YPL254W	YMR253C	Q04835	414 aa		4.74	□□□□□ -1.65
HFI1	YPL254W	ERP1	Q05359	219 aa	Known RBP	4.74	□□□□□ -1.65
HFI1	YPL254W	YPR147C	Q06522	304 aa	Known RBP	4.74	□□□□□ -1.65
HFI1	YPL254W	POS5	Q06892	414 aa		4.74	□□□□□ -1.65
HFI1	YPL254W	RAD28	Q12021	506 aa		4.74	□□□□□ -1.65
HFI1	YPL254W	VAM3	Q12241	283 aa		4.74	□□□□□ -1.65
HFI1	YPL254W	MSW1	P04803	379 aa		4.73	□□□□□ -1.65
HFI1	YPL254W	RPL42A	P0CX27	106 aa	Known RBP	4.73	□□□□□ -1.65
HFI1	YPL254W	RPL42B	P0CX28	106 aa	Known RBP	4.73	□□□□□ -1.65
HFI1	YPL254W	IFM1	P25038	676 aa		4.73	□□□□□ -1.65
HFI1	YPL254W	CWP1	P28319	239 aa		4.73	□□□□□ -1.65
HFI1	YPL254W	NTF2	P33331	125 aa	Known RBP	4.73	□□□□□ -1.65
HFI1	YPL254W	YIL086C	P40503	102 aa		4.73	□□□□□ -1.65
HFI1	YPL254W	YJR011C	P47086	261 aa	Predicted RBP	4.73	□□□□□ -1.65
HFI1	YPL254W	CGR1	P53188	120 aa		4.73	□□□□□ -1.65
HFI1	YPL254W	BSC5	P53755	489 aa		4.73	□□□□□ -1.65
HFI1	YPL254W	DIC1	Q06143	298 aa		4.73	□□□□□ -1.65
HFI1	YPL254W	YOR015W	Q12169	119 aa		4.73	□□□□□ -1.65
HFI1	YPL254W	COX19	Q3E731	98 aa		4.73	□□□□□ -1.65
HFI1	YPL254W	LSO2	Q3E772	92 aa	Known RBP	4.73	□□□□□ -1.65
HFI1	YPL254W	MES1	P00958	751 aa	Known RBP	4.72	□□□□□ -1.65
HFI1	YPL254W	QCR2	P07257	368 aa		4.72	□□□□□ -1.65
HFI1	YPL254W	SCO1	P23833	295 aa		4.72	□□□□□ -1.65
HFI1	YPL254W	FAA1	P30624	700 aa	Known RBP	4.72	□□□□□ -1.65
HFI1	YPL254W	RIB5	P38145	238 aa		4.72	□□□□□ -1.65
HFI1	YPL254W	YBR013C	P38215	129 aa		4.72	□□□□□ -1.65
HFI1	YPL254W	DAN1	P47178	298 aa		4.72	□□□□□ -1.65
HFI1	YPL254W	GPI15	P53961	229 aa		4.72	□□□□□ -1.65
HFI1	YPL254W	IZH1	Q03419	316 aa		4.72	□□□□□ -1.65
HFI1	YPL254W	FIT1	Q04433	528 aa		4.72	□□□□□ -1.65
HFI1	YPL254W	YLR030W	Q07967	263 aa		4.72	□□□□□ -1.65
HFI1	YPL254W	RDL2	Q08742	149 aa	Known RBP	4.72	□□□□□ -1.65
HFI1	YPL254W	YCT1	Q12235	531 aa		4.72	□□□□□ -1.65
HFI1	YPL254W	CYR1	P08678	2026 aa	Known RBP	4.71	□□□□□ -1.65
HFI1	YPL254W	YAL064W-B	O13512	126 aa		4.71	□□□□□ -1.66
HFI1	YPL254W	GDH1	P07262	454 aa	Known RBP	4.71	□□□□□ -1.66
HFI1	YPL254W	MIR1	P23641	311 aa	Known RBP	4.71	□□□□□ -1.66
HFI1	YPL254W	ELO2	P25358	347 aa		4.71	□□□□□ -1.66
HFI1	YPL254W	YCR101C	P25607	182 aa		4.71	□□□□□ -1.66
HFI1	YPL254W	AFG1	P32317	509 aa		4.71	□□□□□ -1.66
HFI1	YPL254W	MNS1	P32906	549 aa		4.71	□□□□□ -1.66
HFI1	YPL254W	YNK1	P36010	153 aa	Known RBP	4.71	□□□□□ -1.66
HFI1	YPL254W	SDH4	P37298	181 aa		4.71	□□□□□ -1.66
HFI1	YPL254W	YIF1	P53845	314 aa	Known RBP	4.71	□□□□□ -1.66
HFI1	YPL254W	MRPS17	Q03246	237 aa	Predicted RBP	4.71	□□□□□ -1.66
HFI1	YPL254W	GMC1	Q04399	608 aa		4.71	□□□□□ -1.66
HFI1	YPL254W	MED4	Q12343	284 aa		4.71	□□□□□ -1.66
HFI1	YPL254W	COX5B	P00425	151 aa		4.7	□□□□□ -1.66
HFI1	YPL254W	POF1	P25576	258 aa		4.7	□□□□□ -1.66
HFI1	YPL254W	GLC7	P32598	312 aa	Known RBP	4.7	□□□□□ -1.66
HFI1	YPL254W	MIA40	P36046	403 aa		4.7	□□□□□ -1.66
HFI1	YPL254W	SWD2	P36104	329 aa	Predicted RBP	4.7	□□□□□ -1.66
HFI1	YPL254W	ATP3	P38077	311 aa	Known RBP	4.7	□□□□□ -1.66
HFI1	YPL254W	YHR210C	P38893	341 aa		4.7	□□□□□ -1.66
HFI1	YPL254W	YND1	P40009	630 aa		4.7	□□□□□ -1.66
HFI1	YPL254W	IKS1	P47042	667 aa		4.7	□□□□□ -1.66
HFI1	YPL254W	YJL016W	P47072	561 aa		4.7	□□□□□ -1.66
HFI1	YPL254W	AVT4	P50944	713 aa		4.7	□□□□□ -1.66
HFI1	YPL254W	TIM21	P53220	239 aa		4.7	□□□□□ -1.66
HFI1	YPL254W	TMA23	Q03525	211 aa		4.7	□□□□□ -1.66

Retrieved 100 of 5,963 RNA–protein pairs in 193.2 ms