RNA–Protein interactions for RNA: YOL090W

MSH2, Transcript of Protein that binds to DNA mismatches, yeastyeast

Gene MSH2, Length 2,895 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSH2YOL090W ATR1P13090 542 aa2.59□□□□□ -2
MSH2YOL090W SFK1P35735 353 aa2.59□□□□□ -2
MSH2YOL090W POP8P38208 133 aa2.59□□□□□ -2
MSH2YOL090W PCI8P40512 444 aa2.59□□□□□ -2
MSH2YOL090W ERV29P53337 310 aa2.59□□□□□ -2
MSH2YOL090W LSM7P53905 115 aaKnown RBP2.59□□□□□ -2
MSH2YOL090W AAH1P53909 347 aa2.59□□□□□ -2
MSH2YOL090W DYN2Q02647 92 aa2.59□□□□□ -2
MSH2YOL090W HRI1Q05905 244 aaKnown RBP2.59□□□□□ -2
MSH2YOL090W YPD1Q07688 167 aa2.59□□□□□ -2
MSH2YOL090W YLR046CQ12253 270 aa2.59□□□□□ -2
MSH2YOL090W CRC1Q12289 327 aa2.59□□□□□ -2
MSH2YOL090W PEX11Q12462 236 aa2.59□□□□□ -2
MSH2YOL090W YAL063C-AQ3E791 96 aa2.59□□□□□ -2
MSH2YOL090W RPS8AP0CX39 200 aaKnown RBP2.58□□□□□ -2
MSH2YOL090W RPS8BP0CX40 200 aaKnown RBP2.58□□□□□ -2
MSH2YOL090W EPT1P22140 391 aa2.58□□□□□ -2
MSH2YOL090W ERG24P32462 438 aaKnown RBP2.58□□□□□ -2
MSH2YOL090W YLR030WQ07967 263 aa2.58□□□□□ -2
MSH2YOL090W SYC1Q08553 188 aaPredicted RBP2.58□□□□□ -2
MSH2YOL090W RPL15AP05748 204 aaKnown RBP2.58□□□□□ -2
MSH2YOL090W URA10P30402 227 aa2.58□□□□□ -2
MSH2YOL090W MRPL39P36533 70 aa2.58□□□□□ -2
MSH2YOL090W PRS3P38689 320 aaKnown RBP2.58□□□□□ -2
MSH2YOL090W DOG2P38773 246 aa2.58□□□□□ -2
MSH2YOL090W TRR2P38816 342 aa2.58□□□□□ -2
MSH2YOL090W SNO3P43544 222 aa2.58□□□□□ -2
MSH2YOL090W FAR7P43592 221 aa2.58□□□□□ -2
MSH2YOL090W NCA3P46955 337 aa2.58□□□□□ -2
MSH2YOL090W YPL278CQ08990 100 aa2.58□□□□□ -2
MSH2YOL090W BBP1Q12365 385 aa2.58□□□□□ -2
MSH2YOL090W YMR316C-AI2HB70 103 aa2.57□□□□□ -2
MSH2YOL090W SPL2P38839 148 aa2.57□□□□□ -2
MSH2YOL090W APS3P47064 194 aa2.57□□□□□ -2
MSH2YOL090W COG7P53195 279 aa2.57□□□□□ -2
MSH2YOL090W WSC2P53832 503 aa2.57□□□□□ -2
MSH2YOL090W TSA2Q04120 196 aa2.57□□□□□ -2
MSH2YOL090W YMR320WQ04897 101 aa2.57□□□□□ -2
MSH2YOL090W YLR177WQ06251 628 aa2.57□□□□□ -2
MSH2YOL090W SCO1P23833 295 aa2.57□□□□□ -2
MSH2YOL090W PEX2P32800 271 aa2.57□□□□□ -2
MSH2YOL090W CSG2P35206 410 aa2.57□□□□□ -2
MSH2YOL090W SCO2P38072 301 aa2.57□□□□□ -2
MSH2YOL090W DIM1P41819 318 aaKnown RBP2.57□□□□□ -2
MSH2YOL090W SOL1P50278 321 aa2.57□□□□□ -2
MSH2YOL090W SCS3P53012 380 aa2.57□□□□□ -2
MSH2YOL090W TIM8P57744 87 aa2.57□□□□□ -2
MSH2YOL090W ELP3Q02908 557 aaKnown RBP2.57□□□□□ -2
MSH2YOL090W YDR249CQ03787 373 aa2.57□□□□□ -2
MSH2YOL090W CSN9Q03981 162 aa2.57□□□□□ -2
MSH2YOL090W FSH2Q05015 223 aa2.57□□□□□ -2
MSH2YOL090W PAL1Q05518 499 aaKnown RBP2.57□□□□□ -2
MSH2YOL090W MHT1Q12525 324 aa2.57□□□□□ -2
MSH2YOL090W UBI4P0CG63 381 aaKnown RBP2.56□□□□□ -2
MSH2YOL090W MSI1P13712 422 aa2.56□□□□□ -2
MSH2YOL090W AHC2P25649 128 aa2.56□□□□□ -2
MSH2YOL090W FMP23P38231 175 aa2.56□□□□□ -2
MSH2YOL090W GLE2P40066 365 aa2.56□□□□□ -2
MSH2YOL090W PRM5P40476 318 aa2.56□□□□□ -2
MSH2YOL090W MAM33P40513 266 aa2.56□□□□□ -2
MSH2YOL090W YGR050CP53231 118 aa2.56□□□□□ -2
MSH2YOL090W TRM12Q04235 462 aa2.56□□□□□ -2
MSH2YOL090W HTZ1Q12692 134 aaKnown RBP2.56□□□□□ -2
MSH2YOL090W YDL085C-AQ3E7B7 68 aaKnown RBP2.56□□□□□ -2
MSH2YOL090W CMD1P06787 147 aaKnown RBP2.56□□□□□ -2
MSH2YOL090W ILV6P25605 309 aaKnown RBP2.56□□□□□ -2
MSH2YOL090W BUB2P26448 306 aaPredicted RBP2.56□□□□□ -2
MSH2YOL090W HAC1P41546 238 aa2.56□□□□□ -2
MSH2YOL090W ATG18P43601 500 aa2.56□□□□□ -2
MSH2YOL090W COS10P52924 374 aa2.56□□□□□ -2
MSH2YOL090W YGR015CP53208 328 aa2.56□□□□□ -2
MSH2YOL090W PKR1Q03880 122 aaKnown RBP2.56□□□□□ -2
MSH2YOL090W ERP1Q05359 219 aaKnown RBP2.56□□□□□ -2
MSH2YOL090W YPR011CQ12251 326 aa2.56□□□□□ -2
MSH2YOL090W DUR1,2P32528 1835 aaKnown RBP2.56□□□□□ -2
MSH2YOL090W CPR1P14832 162 aaKnown RBP2.55□□□□□ -2
MSH2YOL090W FCY2P17064 533 aa2.55□□□□□ -2
MSH2YOL090W PTM1P32857 523 aa2.55□□□□□ -2
MSH2YOL090W RPS1AP33442 255 aaKnown RBP2.55□□□□□ -2
MSH2YOL090W SHE1P38200 338 aa2.55□□□□□ -2
MSH2YOL090W LSM12P38828 187 aaKnown RBP2.55□□□□□ -2
MSH2YOL090W GLC8P41818 229 aa2.55□□□□□ -2
MSH2YOL090W FMP48P53233 369 aa2.55□□□□□ -2
MSH2YOL090W RNH201P53942 307 aa2.55□□□□□ -2
MSH2YOL090W SHH4Q06236 168 aa2.55□□□□□ -2
MSH2YOL090W IES4Q08561 116 aa2.55□□□□□ -2
MSH2YOL090W HHF1P02309 103 aaKnown RBP2.55□□□□□ -2
MSH2YOL090W NHP6AP11632 93 aaKnown RBP2.55□□□□□ -2
MSH2YOL090W MRPS28P21771 286 aa2.55□□□□□ -2
MSH2YOL090W CNB1P25296 175 aa2.55□□□□□ -2
MSH2YOL090W CSE2P33308 149 aa2.55□□□□□ -2
MSH2YOL090W EDC2P40023 145 aaPredicted RBP2.55□□□□□ -2
MSH2YOL090W RRG9P40156 214 aa2.55□□□□□ -2
MSH2YOL090W CAT5P41735 233 aa2.55□□□□□ -2
MSH2YOL090W GPI17Q04080 534 aa2.55□□□□□ -2
MSH2YOL090W CDC7P06243 507 aa2.55□□□□□ -2
MSH2YOL090W LDS1P31379 325 aa2.55□□□□□ -2
MSH2YOL090W ARP3P47117 449 aaKnown RBP2.55□□□□□ -2
MSH2YOL090W CRH1P53301 507 aa2.55□□□□□ -2
MSH2YOL090W RMI1Q02685 241 aa2.55□□□□□ -2
Retrieved 100 of 5,963 RNA–protein pairs in 60 ms