RNA–Protein interactions for RNA: YNL222W

SSU72, Transcript of Phosphatase and transcription/RNA-processing factor, yeastyeast

Gene SSU72, Length 621 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSU72YNL222W MRPL44P19956 98 aa2.7□□□□□ -1.98
SSU72YNL222W RPB9P27999 122 aa2.7□□□□□ -1.98
SSU72YNL222W SUA7P29055 345 aaPredicted RBP2.7□□□□□ -1.98
SSU72YNL222W TRR1P29509 319 aaKnown RBP2.7□□□□□ -1.98
SSU72YNL222W ZRT3P34240 503 aa2.7□□□□□ -1.98
SSU72YNL222W UTP30P36144 274 aaKnown RBP2.7□□□□□ -1.98
SSU72YNL222W MMS21P38632 267 aa2.7□□□□□ -1.98
SSU72YNL222W TRM5P38793 499 aa2.7□□□□□ -1.98
SSU72YNL222W RPF1P38805 295 aaKnown RBP2.7□□□□□ -1.98
SSU72YNL222W RRG9P40156 214 aa2.7□□□□□ -1.98
SSU72YNL222W COA1P40452 197 aa2.7□□□□□ -1.98
SSU72YNL222W SWC4P53201 476 aa2.7□□□□□ -1.98
SSU72YNL222W YCL001W-AP87012 153 aa2.7□□□□□ -1.98
SSU72YNL222W YPL113CQ02961 396 aa2.7□□□□□ -1.98
SSU72YNL222W SDH7Q04401 133 aa2.7□□□□□ -1.98
SSU72YNL222W YML096WQ04489 525 aa2.7□□□□□ -1.98
SSU72YNL222W TVP18Q04767 167 aa2.7□□□□□ -1.98
SSU72YNL222W ATG39Q06159 398 aa2.7□□□□□ -1.98
SSU72YNL222W YET3Q07451 203 aa2.7□□□□□ -1.98
SSU72YNL222W FEX2Q08991 375 aa2.7□□□□□ -1.98
SSU72YNL222W FCF2Q12035 217 aaPredicted RBP2.7□□□□□ -1.98
SSU72YNL222W PER33Q12144 273 aa2.7□□□□□ -1.98
SSU72YNL222W TPO4Q12256 659 aa2.7□□□□□ -1.98
SSU72YNL222W YPR1Q12458 312 aa2.7□□□□□ -1.98
SSU72YNL222W DFM1Q12743 341 aaKnown RBP2.7□□□□□ -1.98
SSU72YNL222W YGL194C-AQ2V2P6 80 aa2.7□□□□□ -1.98
SSU72YNL222W YIR021W-AQ3E739 70 aa2.7□□□□□ -1.98
SSU72YNL222W RPS28AQ3E7X9 67 aaPredicted RBP2.7□□□□□ -1.98
SSU72YNL222W LYS2P07702 1392 aa2.7□□□□□ -1.98
SSU72YNL222W CAT8P39113 1433 aa2.69□□□□□ -1.98
SSU72YNL222W ADK1P07170 222 aaKnown RBP2.69□□□□□ -1.98
SSU72YNL222W POX1P13711 748 aa2.69□□□□□ -1.98
SSU72YNL222W YMR31P19955 123 aa2.69□□□□□ -1.98
SSU72YNL222W MAG1P22134 296 aaKnown RBP2.69□□□□□ -1.98
SSU72YNL222W ERG9P29704 444 aa2.69□□□□□ -1.98
SSU72YNL222W YKL162CP36052 402 aa2.69□□□□□ -1.98
SSU72YNL222W YPT31P38555 223 aaKnown RBP2.69□□□□□ -1.98
SSU72YNL222W IKI1P38874 309 aa2.69□□□□□ -1.98
SSU72YNL222W SMB1P40018 196 aaKnown RBP2.69□□□□□ -1.98
SSU72YNL222W LSM4P40070 187 aaKnown RBP2.69□□□□□ -1.98
SSU72YNL222W RPL10P41805 221 aaKnown RBP2.69□□□□□ -1.98
SSU72YNL222W GLC8P41818 229 aa2.69□□□□□ -1.98
SSU72YNL222W PMT4P46971 762 aa2.69□□□□□ -1.98
SSU72YNL222W ADO1P47143 340 aaKnown RBP2.69□□□□□ -1.98
SSU72YNL222W DIE2P50076 525 aa2.69□□□□□ -1.98
SSU72YNL222W NIF3P53081 288 aa2.69□□□□□ -1.98
SSU72YNL222W ERV14P53173 138 aa2.69□□□□□ -1.98
SSU72YNL222W TPC1P53257 314 aa2.69□□□□□ -1.98
SSU72YNL222W SPP2Q02521 185 aa2.69□□□□□ -1.98
SSU72YNL222W YMR253CQ04835 414 aa2.69□□□□□ -1.98
SSU72YNL222W ASR1Q06834 288 aa2.69□□□□□ -1.98
SSU72YNL222W MEU1Q07938 337 aaKnown RBP RIP-Chip data2.69□□□□□ -1.98not detected
SSU72YNL222W FSF1Q12029 327 aaKnown RBP2.69□□□□□ -1.98
SSU72YNL222W YPR063CQ12160 140 aa2.69□□□□□ -1.98
SSU72YNL222W SLO1Q3E784 85 aa2.69□□□□□ -1.98
SSU72YNL222W YPR014CQ6B0W2 109 aa2.69□□□□□ -1.98
SSU72YNL222W YHR213W-AQ8TGT4 77 aa2.69□□□□□ -1.98
SSU72YNL222W SAS5Q99314 248 aa2.69□□□□□ -1.98
SSU72YNL222W TY1B-PR2P0C2J0 1756 aa2.69□□□□□ -1.98
SSU72YNL222W YCF1P39109 1515 aaKnown RBP2.68□□□□□ -1.98
SSU72YNL222W YPR096CO13587 100 aa2.68□□□□□ -1.98
SSU72YNL222W BCY1P07278 416 aaKnown RBP2.68□□□□□ -1.98
SSU72YNL222W YFR010W-AP0C5N0 62 aa2.68□□□□□ -1.98
SSU72YNL222W GCY1P14065 312 aaKnown RBP RIP-Chip data2.68□□□□□ -1.98not detected
SSU72YNL222W PHO80P20052 293 aa2.68□□□□□ -1.98
SSU72YNL222W YSR3P23501 404 aa2.68□□□□□ -1.98
SSU72YNL222W YCR023CP25351 611 aa2.68□□□□□ -1.98
SSU72YNL222W PEX4P29340 183 aa2.68□□□□□ -1.98
SSU72YNL222W OCH1P31755 480 aa2.68□□□□□ -1.98
SSU72YNL222W RCK1P38622 512 aa2.68□□□□□ -1.98
SSU72YNL222W YHR127WP38833 243 aaKnown RBP2.68□□□□□ -1.98
SSU72YNL222W RPA43P46669 326 aa2.68□□□□□ -1.98
SSU72YNL222W RPS12P48589 143 aaKnown RBP2.68□□□□□ -1.98
SSU72YNL222W MGA1P53050 456 aa2.68□□□□□ -1.98
SSU72YNL222W PEX31P53203 462 aa2.68□□□□□ -1.98
SSU72YNL222W DAD3P69850 94 aa2.68□□□□□ -1.98
SSU72YNL222W UBC7Q02159 165 aa2.68□□□□□ -1.98
SSU72YNL222W ABF2Q02486 183 aa2.68□□□□□ -1.98
SSU72YNL222W YDR278CQ05612 105 aa2.68□□□□□ -1.98
SSU72YNL222W PRP11Q07350 266 aaPredicted RBP2.68□□□□□ -1.98
SSU72YNL222W PRP46Q12417 451 aaPredicted RBP2.68□□□□□ -1.98
SSU72YNL222W RIB3Q99258 208 aa2.68□□□□□ -1.98
SSU72YNL222W TY1B-HO13535 1793 aa2.68□□□□□ -1.98
SSU72YNL222W TY1B-DR5P0C2I2 1755 aa2.68□□□□□ -1.98
SSU72YNL222W TY1B-DR6P0C2I3 1755 aa2.68□□□□□ -1.98
SSU72YNL222W TY1B-LR2P0C2I5 1755 aa2.68□□□□□ -1.98
SSU72YNL222W TY1B-LR3P0C2I6 1755 aaKnown RBP2.68□□□□□ -1.98
SSU72YNL222W TY1B-PR1P0C2I9 1755 aaKnown RBP2.68□□□□□ -1.98
SSU72YNL222W TY1B-PR3P0C2J1 1755 aaKnown RBP2.68□□□□□ -1.98
SSU72YNL222W TY1B-JR1P47098 1755 aa2.68□□□□□ -1.98
SSU72YNL222W TY1B-ML2Q03434 1755 aaKnown RBP2.68□□□□□ -1.98
SSU72YNL222W TY1B-ER1Q03612 1755 aa2.68□□□□□ -1.98
SSU72YNL222W TY1B-ML1Q04711 1755 aaKnown RBP2.68□□□□□ -1.98
SSU72YNL222W TY1B-GR2Q12269 1755 aa2.68□□□□□ -1.98
SSU72YNL222W TY1B-OLQ12273 1755 aa2.68□□□□□ -1.98
SSU72YNL222W TY1B-PLQ12414 1755 aaKnown RBP2.68□□□□□ -1.98
SSU72YNL222W DAL82P21705 255 aa2.67□□□□□ -1.98
SSU72YNL222W YPS1P32329 569 aa2.67□□□□□ -1.98
SSU72YNL222W MRP49P32388 137 aa2.67□□□□□ -1.98
SSU72YNL222W HIS2P38635 335 aa2.67□□□□□ -1.98
Retrieved 100 of 5,963 RNA–protein pairs in 16.8 ms