RNA–Protein interactions for RNA: YLR040C

AFB1, Transcript of MATalpha-specific a-factor blocker, yeastyeast

Gene AFB1, Length 675 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
AFB1YLR040C TDA8Q6B2U8 126 aa0.96□□□□□ -2.26
AFB1YLR040C CFT1Q06632 1357 aaKnown RBP0.96□□□□□ -2.26
AFB1YLR040C TIM9O74700 87 aa0.95□□□□□ -2.26
AFB1YLR040C CDC28P00546 298 aaKnown RBP0.95□□□□□ -2.26
AFB1YLR040C POP3P53833 195 aaPredicted RBP0.95□□□□□ -2.26
AFB1YLR040C NOP13P53883 403 aaKnown RBP RIP-Chip data0.95□□□□□ -2.26not detected
AFB1YLR040C GAS3Q03655 524 aa0.95□□□□□ -2.26
AFB1YLR040C YML108WQ03759 105 aa0.95□□□□□ -2.26
AFB1YLR040C SEC17P32602 292 aa0.94□□□□□ -2.26
AFB1YLR040C YER076CP40049 302 aa0.94□□□□□ -2.26
AFB1YLR040C EAF6P47128 113 aa0.94□□□□□ -2.26
AFB1YLR040C ALG13P53178 202 aa0.94□□□□□ -2.26
AFB1YLR040C SAY1P53324 424 aa0.94□□□□□ -2.26
AFB1YLR040C UBC7Q02159 165 aa0.94□□□□□ -2.26
AFB1YLR040C RRN5Q02983 363 aa0.94□□□□□ -2.26
AFB1YLR040C MCP1Q12106 302 aa0.94□□□□□ -2.26
AFB1YLR040C MET5P47169 1442 aa0.93□□□□□ -2.26
AFB1YLR040C VAR1P02381 398 aa0.93□□□□□ -2.26
AFB1YLR040C DBF2P22204 572 aa0.93□□□□□ -2.26
AFB1YLR040C UTP30P36144 274 aaKnown RBP0.93□□□□□ -2.26
AFB1YLR040C PRE6P40303 254 aaKnown RBP0.93□□□□□ -2.26
AFB1YLR040C ERJ5P43613 295 aaPredicted RBP0.93□□□□□ -2.26
AFB1YLR040C FYV6P53913 173 aa0.93□□□□□ -2.26
AFB1YLR040C YDR248CQ03786 193 aa0.93□□□□□ -2.26
AFB1YLR040C CDC123Q05791 360 aa0.93□□□□□ -2.26
AFB1YLR040C YPL162CQ12042 273 aa0.93□□□□□ -2.26
AFB1YLR040C MSB2P32334 1306 aa0.92□□□□□ -2.26
AFB1YLR040C TUS1Q06412 1307 aa0.92□□□□□ -2.26
AFB1YLR040C MSN4P33749 630 aa0.92□□□□□ -2.26
AFB1YLR040C GVP36P40531 326 aaKnown RBP0.92□□□□□ -2.26
AFB1YLR040C KNH1P50112 268 aa0.92□□□□□ -2.26
AFB1YLR040C FSF1Q12029 327 aaKnown RBP0.92□□□□□ -2.26
AFB1YLR040C TSC3Q3E790 80 aa0.92□□□□□ -2.26
AFB1YLR040C RHO1P06780 209 aaKnown RBP0.91□□□□□ -2.26
AFB1YLR040C AQY2P0CD90 149 aa0.91□□□□□ -2.26
AFB1YLR040C TFC1P32367 649 aa0.91□□□□□ -2.26
AFB1YLR040C TCA17P32613 152 aa0.91□□□□□ -2.26
AFB1YLR040C SNC2P33328 115 aa0.91□□□□□ -2.26
AFB1YLR040C FAR7P43592 221 aa0.91□□□□□ -2.26
AFB1YLR040C MIC26P50087 233 aa0.91□□□□□ -2.26
AFB1YLR040C PRM8P53174 237 aa0.91□□□□□ -2.26
AFB1YLR040C IDH1P28834 360 aaKnown RBP RIP-Chip data0.9□□□□□ -2.27not detected
AFB1YLR040C YBR209WP38311 105 aa0.9□□□□□ -2.27
AFB1YLR040C MIC12P38341 106 aa0.9□□□□□ -2.27
AFB1YLR040C BXI1P48558 297 aa0.9□□□□□ -2.27
AFB1YLR040C RPL37AP49166 88 aaKnown RBP0.9□□□□□ -2.27
AFB1YLR040C BRR6P53062 197 aa0.9□□□□□ -2.27
AFB1YLR040C CUS2P53830 285 aaPredicted RBP0.9□□□□□ -2.27
AFB1YLR040C GPM2Q12008 311 aa0.9□□□□□ -2.27
AFB1YLR040C THP2O13539 261 aaKnown RBP0.89□□□□□ -2.27
AFB1YLR040C YMR31P19955 123 aa0.89□□□□□ -2.27
AFB1YLR040C VMA22P38784 181 aa0.89□□□□□ -2.27
AFB1YLR040C YER085CP40058 173 aa0.89□□□□□ -2.27
AFB1YLR040C RIO2P40160 425 aaKnown RBP0.89□□□□□ -2.27
AFB1YLR040C YNL146C-AQ3E7Z1 64 aa0.89□□□□□ -2.27
AFB1YLR040C ATG40Q99325 256 aa0.89□□□□□ -2.27
AFB1YLR040C ACC1Q00955 2233 aaKnown RBP0.88□□□□□ -2.27
AFB1YLR040C YLR236CA0A023PZG4 107 aa0.88□□□□□ -2.27
AFB1YLR040C SIR2P06700 562 aa0.88□□□□□ -2.27
AFB1YLR040C VMA6P32366 345 aaKnown RBP0.88□□□□□ -2.27
AFB1YLR040C SSO1P32867 290 aa0.88□□□□□ -2.27
AFB1YLR040C APS1P35181 156 aa0.88□□□□□ -2.27
AFB1YLR040C SKG1P36169 355 aa0.88□□□□□ -2.27
AFB1YLR040C SIP3P38717 1229 aa0.88□□□□□ -2.27
AFB1YLR040C YEL067CP39978 195 aa0.88□□□□□ -2.27
AFB1YLR040C COX15P40086 486 aa0.88□□□□□ -2.27
AFB1YLR040C YDR274CP87283 123 aa0.88□□□□□ -2.27
AFB1YLR040C PET191Q02772 108 aa0.88□□□□□ -2.27
AFB1YLR040C YDL180WQ12301 547 aa0.88□□□□□ -2.27
AFB1YLR040C TVP38P36164 337 aa0.87□□□□□ -2.27
AFB1YLR040C RTC3P38804 111 aaPredicted RBP0.87□□□□□ -2.27
AFB1YLR040C YHR214C-EQ8TGK0 99 aa0.87□□□□□ -2.27
AFB1YLR040C YFR032C-BQ8TGU2 87 aa0.87□□□□□ -2.27
AFB1YLR040C RPL28P02406 149 aaKnown RBP0.86□□□□□ -2.27
AFB1YLR040C YGR050CP53231 118 aa0.86□□□□□ -2.27
AFB1YLR040C YDR249CQ03787 373 aa0.86□□□□□ -2.27
AFB1YLR040C RAD28Q12021 506 aa0.86□□□□□ -2.27
AFB1YLR040C SLH1P53327 1967 aaKnown RBP0.86□□□□□ -2.27
AFB1YLR040C KSS1P14681 368 aa0.85□□□□□ -2.27
AFB1YLR040C SEC11P15367 167 aa0.85□□□□□ -2.27
AFB1YLR040C ATP15P21306 62 aa0.85□□□□□ -2.27
AFB1YLR040C RPL24BP24000 155 aaKnown RBP0.85□□□□□ -2.27
AFB1YLR040C SHE2P36068 246 aaKnown RBP RIP-Chip data0.85□□□□□ -2.27not detected
AFB1YLR040C YBR285WP38354 144 aa0.85□□□□□ -2.27
AFB1YLR040C YKL183C-AQ3E765 70 aa0.85□□□□□ -2.27
AFB1YLR040C YIL177CP40434 1758 aa0.85□□□□□ -2.27
AFB1YLR040C YJL225CP40889 1758 aa0.85□□□□□ -2.27
AFB1YLR040C SEC4P07560 215 aaKnown RBP0.84□□□□□ -2.27
AFB1YLR040C RPL27AP0C2H6 136 aaKnown RBP0.84□□□□□ -2.27
AFB1YLR040C URA5P13298 226 aaKnown RBP0.84□□□□□ -2.27
AFB1YLR040C GCN3P14741 305 aa0.84□□□□□ -2.27
AFB1YLR040C NSP1P14907 823 aaKnown RBP0.84□□□□□ -2.27
AFB1YLR040C BET1P22804 142 aa0.84□□□□□ -2.27
AFB1YLR040C PBN1P25580 416 aa0.84□□□□□ -2.27
AFB1YLR040C PPA2P28239 310 aa0.84□□□□□ -2.27
AFB1YLR040C MGM101P32787 269 aaKnown RBP0.84□□□□□ -2.27
AFB1YLR040C AST2P39945 430 aaKnown RBP0.84□□□□□ -2.27
AFB1YLR040C SEY1Q99287 776 aa0.84□□□□□ -2.27
AFB1YLR040C YBR121C-AP0C5L4 52 aa0.83□□□□□ -2.28
AFB1YLR040C RPB3P16370 318 aaKnown RBP0.83□□□□□ -2.28
Retrieved 100 of 5,963 RNA–protein pairs in 112.4 ms