RNA–Protein interactions for RNA: YLR005W

SSL1, Transcript of Subunit of the core form of RNA polymerase transcription factor TFIIH, yeastyeast

Gene SSL1, Length 1,386 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSL1YLR005W YPL119C-AQ3E751 87 aa3.09□□□□□ -1.92
SSL1YLR005W YLR302CO13544 120 aa3.08□□□□□ -1.92
SSL1YLR005W PEX4P29340 183 aa3.08□□□□□ -1.92
SSL1YLR005W PRP21P32524 280 aaPredicted RBP3.08□□□□□ -1.92
SSL1YLR005W RAD23P32628 398 aaKnown RBP3.08□□□□□ -1.92
SSL1YLR005W SNC2P33328 115 aa3.08□□□□□ -1.92
SSL1YLR005W YBR144CP34215 104 aa3.08□□□□□ -1.92
SSL1YLR005W SDH8P38345 138 aa3.08□□□□□ -1.92
SSL1YLR005W AIM10P39965 576 aaKnown RBP3.08□□□□□ -1.92
SSL1YLR005W CCS1P40202 249 aaKnown RBP3.08□□□□□ -1.92
SSL1YLR005W GNA1P43577 159 aaPredicted RBP3.08□□□□□ -1.92
SSL1YLR005W YJR056CP47115 236 aa3.08□□□□□ -1.92
SSL1YLR005W PHB2P50085 310 aa3.08□□□□□ -1.92
SSL1YLR005W POP6P53218 158 aa3.08□□□□□ -1.92
SSL1YLR005W MIX17Q03667 156 aa3.08□□□□□ -1.92
SSL1YLR005W RBS1Q05672 457 aaKnown RBP3.08□□□□□ -1.92
SSL1YLR005W NEJ1Q06148 342 aa3.08□□□□□ -1.92
SSL1YLR005W NOC4Q06512 552 aaPredicted RBP3.08□□□□□ -1.92
SSL1YLR005W YPR1Q12458 312 aa3.08□□□□□ -1.92
SSL1YLR005W MRPL23Q12487 163 aaPredicted RBP3.08□□□□□ -1.92
SSL1YLR005W QCR7P00128 127 aa3.07□□□□□ -1.92
SSL1YLR005W COX2P00410 251 aa3.07□□□□□ -1.92
SSL1YLR005W RNA14P25298 677 aaKnown RBP3.07□□□□□ -1.92
SSL1YLR005W YCR061WP25639 631 aa3.07□□□□□ -1.92
SSL1YLR005W RFA3P26755 122 aaKnown RBP3.07□□□□□ -1.92
SSL1YLR005W ARO7P32178 256 aa3.07□□□□□ -1.92
SSL1YLR005W ERG2P32352 222 aa3.07□□□□□ -1.92
SSL1YLR005W VMA6P32366 345 aaKnown RBP3.07□□□□□ -1.92
SSL1YLR005W DOA4P32571 926 aa3.07□□□□□ -1.92
SSL1YLR005W PRS4P38063 326 aaPredicted RBP3.07□□□□□ -1.92
SSL1YLR005W PAU24P38155 120 aa3.07□□□□□ -1.92
SSL1YLR005W YRB2P40517 327 aa3.07□□□□□ -1.92
SSL1YLR005W VMA10P48836 114 aaKnown RBP3.07□□□□□ -1.92
SSL1YLR005W HSK3P69852 69 aa3.07□□□□□ -1.92
SSL1YLR005W HOR7Q05827 59 aa3.07□□□□□ -1.92
SSL1YLR005W ORT1Q12375 292 aa3.07□□□□□ -1.92
SSL1YLR005W YER175W-AQ8TGU4 54 aa3.07□□□□□ -1.92
SSL1YLR005W REP2P03872 296 aa3.06□□□□□ -1.92
SSL1YLR005W OLE1P21147 510 aaKnown RBP3.06□□□□□ -1.92
SSL1YLR005W DPB2P24482 689 aaPredicted RBP3.06□□□□□ -1.92
SSL1YLR005W AHC2P25649 128 aa3.06□□□□□ -1.92
SSL1YLR005W INO2P26798 304 aa3.06□□□□□ -1.92
SSL1YLR005W FUN26P31381 517 aa3.06□□□□□ -1.92
SSL1YLR005W PRM5P40476 318 aa3.06□□□□□ -1.92
SSL1YLR005W FMC1P40491 155 aa3.06□□□□□ -1.92
SSL1YLR005W FIP1P45976 327 aa3.06□□□□□ -1.92
SSL1YLR005W RSM27P53305 110 aa3.06□□□□□ -1.92
SSL1YLR005W CAB4P53332 305 aa3.06□□□□□ -1.92
SSL1YLR005W MDM36Q06820 579 aa3.06□□□□□ -1.92
SSL1YLR005W DGK1Q12382 290 aa3.06□□□□□ -1.92
SSL1YLR005W MDH1P17505 334 aaKnown RBP RIP-Chip data3.05□□□□□ -1.92not detected
SSL1YLR005W PRE7P23724 241 aaKnown RBP3.05□□□□□ -1.92
SSL1YLR005W COQ3P27680 312 aa3.05□□□□□ -1.92
SSL1YLR005W MRP20P32387 263 aa3.05□□□□□ -1.92
SSL1YLR005W UTR5P32630 166 aa3.05□□□□□ -1.92
SSL1YLR005W AST1P35183 429 aa3.05□□□□□ -1.92
SSL1YLR005W SFK1P35735 353 aa3.05□□□□□ -1.92
SSL1YLR005W SDH4P37298 181 aa3.05□□□□□ -1.92
SSL1YLR005W SLM4P38247 162 aa3.05□□□□□ -1.92
SSL1YLR005W NTC20P38302 140 aaPredicted RBP3.05□□□□□ -1.92
SSL1YLR005W YBR285WP38354 144 aa3.05□□□□□ -1.92
SSL1YLR005W PHM8P40025 321 aa3.05□□□□□ -1.92
SSL1YLR005W AVT6P40074 448 aa3.05□□□□□ -1.92
SSL1YLR005W YJL213WP40896 331 aa3.05□□□□□ -1.92
SSL1YLR005W YJL118WP47022 219 aa3.05□□□□□ -1.92
SSL1YLR005W VPS55P47111 140 aa3.05□□□□□ -1.92
SSL1YLR005W LYS20P48570 428 aaKnown RBP3.05□□□□□ -1.92
SSL1YLR005W TLG1Q03322 224 aa3.05□□□□□ -1.92
SSL1YLR005W YLR283WQ05867 314 aa3.05□□□□□ -1.92
SSL1YLR005W ATG17Q06410 417 aa3.05□□□□□ -1.92
SSL1YLR005W YPD1Q07688 167 aa3.05□□□□□ -1.92
SSL1YLR005W PRM3Q08931 133 aa3.05□□□□□ -1.92
SSL1YLR005W LYS21Q12122 440 aaKnown RBP3.05□□□□□ -1.92
SSL1YLR005W CDC31P06704 161 aaKnown RBP3.04□□□□□ -1.92
SSL1YLR005W GRX2P17695 143 aaKnown RBP3.04□□□□□ -1.92
SSL1YLR005W SPS18P32572 300 aa3.04□□□□□ -1.92
SSL1YLR005W PAU2P32612 120 aa3.04□□□□□ -1.92
SSL1YLR005W YKL063CP35725 167 aa3.04□□□□□ -1.92
SSL1YLR005W SRY1P36007 326 aa3.04□□□□□ -1.92
SSL1YLR005W UMP1P38293 148 aa3.04□□□□□ -1.92
SSL1YLR005W EGD2P38879 174 aaKnown RBP3.04□□□□□ -1.92
SSL1YLR005W NVJ1P38881 321 aa3.04□□□□□ -1.92
SSL1YLR005W SMB1P40018 196 aaKnown RBP3.04□□□□□ -1.92
SSL1YLR005W BMT5P40493 336 aa3.04□□□□□ -1.92
SSL1YLR005W ERG25P53045 309 aa3.04□□□□□ -1.92
SSL1YLR005W YLR281CQ05863 155 aa3.04□□□□□ -1.92
SSL1YLR005W YGK3Q12222 375 aaPredicted RBP3.04□□□□□ -1.92
SSL1YLR005W ATO3Q12359 275 aa3.04□□□□□ -1.92
SSL1YLR005W YHR212W-AP0CX91 67 aa3.03□□□□□ -1.92
SSL1YLR005W YCP4P25349 247 aaKnown RBP3.03□□□□□ -1.92
SSL1YLR005W ERG3P32353 365 aa3.03□□□□□ -1.92
SSL1YLR005W HYM1P32464 399 aa3.03□□□□□ -1.92
SSL1YLR005W SIP1P32578 815 aa3.03□□□□□ -1.92
SSL1YLR005W YBL010CP32788 280 aa3.03□□□□□ -1.92
SSL1YLR005W YHK8P38776 514 aa3.03□□□□□ -1.92
SSL1YLR005W RTT105P40063 208 aa3.03□□□□□ -1.92
SSL1YLR005W MSS2P40990 351 aa3.03□□□□□ -1.92
SSL1YLR005W YGL262WP53054 175 aa3.03□□□□□ -1.92
SSL1YLR005W CTF19Q02732 369 aa3.03□□□□□ -1.92
SSL1YLR005W HNT1Q04344 158 aaKnown RBP3.03□□□□□ -1.92
Retrieved 100 of 5,963 RNA–protein pairs in 1279.4 ms