RNA–Protein interactions for RNA: YJL154C

VPS35, Transcript of Endosomal subunit of membrane-associated retromer complex, yeastyeast

Gene VPS35, Length 2,835 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS35YJL154C YOL085CQ99345 113 aa1.57□□□□□ -2.16
VPS35YJL154C Q0144Q9ZZW2 109 aa1.57□□□□□ -2.16
VPS35YJL154C KIN28P06242 306 aa1.57□□□□□ -2.16
VPS35YJL154C PET54P10834 293 aa1.57□□□□□ -2.16
VPS35YJL154C NHP6AP11632 93 aaKnown RBP1.57□□□□□ -2.16
VPS35YJL154C CDC10P25342 322 aaKnown RBP1.57□□□□□ -2.16
VPS35YJL154C YCR101CP25607 182 aa1.57□□□□□ -2.16
VPS35YJL154C TRR1P29509 319 aaKnown RBP1.57□□□□□ -2.16
VPS35YJL154C AEP1P32493 518 aa1.57□□□□□ -2.16
VPS35YJL154C FMT1P32785 401 aa1.57□□□□□ -2.16
VPS35YJL154C YBR062CP38239 180 aa1.57□□□□□ -2.16
VPS35YJL154C MED8P38304 223 aa1.57□□□□□ -2.16
VPS35YJL154C AVT6P40074 448 aa1.57□□□□□ -2.16
VPS35YJL154C BMT5P40493 336 aa1.57□□□□□ -2.16
VPS35YJL154C HST4P53688 370 aa1.57□□□□□ -2.16
VPS35YJL154C NUP49Q02199 472 aa1.57□□□□□ -2.16
VPS35YJL154C SMD1Q02260 146 aaPredicted RBP1.57□□□□□ -2.16
VPS35YJL154C YDR209CQ03480 137 aa1.57□□□□□ -2.16
VPS35YJL154C ECM19Q06011 112 aa1.57□□□□□ -2.16
VPS35YJL154C PIN3Q06449 215 aa1.57□□□□□ -2.16
VPS35YJL154C YPR127WQ06494 345 aa1.57□□□□□ -2.16
VPS35YJL154C PLB3Q08108 686 aa1.57□□□□□ -2.16
VPS35YJL154C YOR114WQ12219 294 aa1.57□□□□□ -2.16
VPS35YJL154C YKL068W-AQ3E826 78 aa1.57□□□□□ -2.16
VPS35YJL154C RPS28BP0C0X0 67 aaKnown RBP1.56□□□□□ -2.16
VPS35YJL154C HSP30P25619 332 aa1.56□□□□□ -2.16
VPS35YJL154C RPS1AP33442 255 aaKnown RBP1.56□□□□□ -2.16
VPS35YJL154C MRPL17P36528 281 aa1.56□□□□□ -2.16
VPS35YJL154C SHG1P38337 142 aa1.56□□□□□ -2.16
VPS35YJL154C HPM1P40481 377 aa1.56□□□□□ -2.16
VPS35YJL154C ECO1P43605 281 aa1.56□□□□□ -2.16
VPS35YJL154C BUD13P46947 266 aaPredicted RBP1.56□□□□□ -2.16
VPS35YJL154C SWT21P53873 357 aaPredicted RBP1.56□□□□□ -2.16
VPS35YJL154C DYN2Q02647 92 aa1.56□□□□□ -2.16
VPS35YJL154C YPL113CQ02961 396 aa1.56□□□□□ -2.16
VPS35YJL154C OST6Q03723 332 aa1.56□□□□□ -2.16
VPS35YJL154C YDR114CQ04597 100 aa1.56□□□□□ -2.16
VPS35YJL154C NEJ1Q06148 342 aa1.56□□□□□ -2.16
VPS35YJL154C YLR031WQ07978 186 aa1.56□□□□□ -2.16
VPS35YJL154C USB1Q12208 290 aaKnown RBP1.56□□□□□ -2.16
VPS35YJL154C BBP1Q12365 385 aa1.56□□□□□ -2.16
VPS35YJL154C YLR361C-AQ3E795 98 aa1.56□□□□□ -2.16
VPS35YJL154C RPS28AQ3E7X9 67 aaPredicted RBP1.56□□□□□ -2.16
VPS35YJL154C RPL4AP10664 362 aaKnown RBP1.56□□□□□ -2.16
VPS35YJL154C CAT2P32796 670 aaKnown RBP1.56□□□□□ -2.16
VPS35YJL154C GOS1P38736 223 aa1.56□□□□□ -2.16
VPS35YJL154C NPT1P39683 429 aaKnown RBP1.56□□□□□ -2.16
VPS35YJL154C RMD6P39975 231 aa1.56□□□□□ -2.16
VPS35YJL154C COG3P40094 801 aa1.56□□□□□ -2.16
VPS35YJL154C AVT7P40501 490 aa1.56□□□□□ -2.16
VPS35YJL154C RPL4BP49626 362 aaKnown RBP1.56□□□□□ -2.16
VPS35YJL154C COG5P53951 403 aa1.56□□□□□ -2.16
VPS35YJL154C YNL040WP53960 456 aaPredicted RBP1.56□□□□□ -2.16
VPS35YJL154C RUB1Q03919 77 aa1.56□□□□□ -2.16
VPS35YJL154C YLR036CQ07986 203 aa1.56□□□□□ -2.16
VPS35YJL154C RPO41P13433 1351 aaKnown RBP1.56□□□□□ -2.16
VPS35YJL154C RPP0P05317 312 aaKnown RBP1.55□□□□□ -2.16
VPS35YJL154C GCY1P14065 312 aaKnown RBP RIP-Chip data1.55□□□□□ -2.16not detected
VPS35YJL154C BUD23P25627 275 aaPredicted RBP1.55□□□□□ -2.16
VPS35YJL154C ECM13P38195 257 aa1.55□□□□□ -2.16
VPS35YJL154C FMP32P43557 207 aa1.55□□□□□ -2.16
VPS35YJL154C YJR012CP47087 207 aa1.55□□□□□ -2.16
VPS35YJL154C MIC26P50087 233 aa1.55□□□□□ -2.16
VPS35YJL154C COS6P53344 381 aa1.55□□□□□ -2.16
VPS35YJL154C CDC14Q00684 551 aa1.55□□□□□ -2.16
VPS35YJL154C VBA1Q04301 562 aa1.55□□□□□ -2.16
VPS35YJL154C YNG1Q08465 219 aa1.55□□□□□ -2.16
VPS35YJL154C AKR2Q12013 749 aa1.55□□□□□ -2.16
VPS35YJL154C AGC1Q12482 902 aa1.55□□□□□ -2.16
VPS35YJL154C YOR304C-AO14468 76 aa1.55□□□□□ -2.16
VPS35YJL154C CDC8P00572 216 aa1.55□□□□□ -2.16
VPS35YJL154C YCR102CP25608 368 aa1.55□□□□□ -2.16
VPS35YJL154C CSG2P35206 410 aa1.55□□□□□ -2.16
VPS35YJL154C YCR087C-AP37263 153 aa1.55□□□□□ -2.16
VPS35YJL154C YBR242WP38331 238 aa1.55□□□□□ -2.16
VPS35YJL154C COX15P40086 486 aa1.55□□□□□ -2.16
VPS35YJL154C DDI1P40087 428 aa1.55□□□□□ -2.16
VPS35YJL154C MRPL49P40858 161 aaPredicted RBP1.55□□□□□ -2.16
VPS35YJL154C YFH7P43591 353 aa1.55□□□□□ -2.16
VPS35YJL154C ADO1P47143 340 aaKnown RBP1.55□□□□□ -2.16
VPS35YJL154C JHD2P47156 728 aaPredicted RBP1.55□□□□□ -2.16
VPS35YJL154C NRK1P53915 240 aa1.55□□□□□ -2.16
VPS35YJL154C DML1Q03652 475 aa1.55□□□□□ -2.16
VPS35YJL154C YMR315WQ04869 349 aaKnown RBP1.55□□□□□ -2.16
VPS35YJL154C DCN1Q12395 269 aa1.55□□□□□ -2.16
VPS35YJL154C RDI1Q12434 202 aa1.55□□□□□ -2.16
VPS35YJL154C PRM7Q12459 698 aa1.55□□□□□ -2.16
VPS35YJL154C YCL001W-BQ96VH2 84 aa1.55□□□□□ -2.16
VPS35YJL154C FLO1P32768 1537 aa1.55□□□□□ -2.16
VPS35YJL154C YEL009C-AA0A023PZF2 135 aa1.54□□□□□ -2.16
VPS35YJL154C YAL064W-BO13512 126 aa1.54□□□□□ -2.16
VPS35YJL154C GRX2P17695 143 aaKnown RBP1.54□□□□□ -2.16
VPS35YJL154C POF1P25576 258 aa1.54□□□□□ -2.16
VPS35YJL154C RPB9P27999 122 aa1.54□□□□□ -2.16
VPS35YJL154C SGE1P33335 543 aa1.54□□□□□ -2.16
VPS35YJL154C YKR041WP36134 250 aa1.54□□□□□ -2.16
VPS35YJL154C MBA1P38300 278 aa1.54□□□□□ -2.16
VPS35YJL154C PRE6P40303 254 aaKnown RBP1.54□□□□□ -2.16
VPS35YJL154C RPL10P41805 221 aaKnown RBP1.54□□□□□ -2.16
VPS35YJL154C YJR079WP47126 109 aa1.54□□□□□ -2.16
Retrieved 100 of 5,963 RNA–protein pairs in 23.6 ms