RNA–Protein interactions for RNA: YIR006C

PAN1, Transcript of Part of actin cytoskeleton-regulatory complex Pan1p-Sla1p-End3p, yeast

Gene PAN1, Length 4,443 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PAN1	YIR006C	CIS3	P47001	227 aa		4.18	□□□□□ -1.74
PAN1	YIR006C	TIM21	P53220	239 aa		4.18	□□□□□ -1.74
PAN1	YIR006C	YDR541C	Q03049	344 aa		4.18	□□□□□ -1.74
PAN1	YIR006C	YMR254C	Q04838	102 aa		4.18	□□□□□ -1.74
PAN1	YIR006C	YLR030W	Q07967	263 aa		4.18	□□□□□ -1.74
PAN1	YIR006C	NHP6B	P11633	99 aa	Known RBP	4.18	□□□□□ -1.74
PAN1	YIR006C	RPB8	P20436	146 aa		4.18	□□□□□ -1.74
PAN1	YIR006C	MCH2	P36032	473 aa		4.18	□□□□□ -1.74
PAN1	YIR006C	YER121W	P40076	114 aa		4.18	□□□□□ -1.74
PAN1	YIR006C	DUG1	P43616	481 aa	Known RBP	4.18	□□□□□ -1.74
PAN1	YIR006C	YDR366C	P87287	132 aa		4.18	□□□□□ -1.74
PAN1	YIR006C	MCP1	Q12106	302 aa		4.18	□□□□□ -1.74
PAN1	YIR006C	POM33	Q12164	279 aa		4.18	□□□□□ -1.74
PAN1	YIR006C	PAA1	Q12447	191 aa	Known RBP	4.18	□□□□□ -1.74
PAN1	YIR006C	SAG1	P20840	650 aa		4.18	□□□□□ -1.74
PAN1	YIR006C	REC114	P32841	428 aa		4.18	□□□□□ -1.74
PAN1	YIR006C	AIM29	P36154	155 aa		4.18	□□□□□ -1.74
PAN1	YIR006C	YER079W	P40052	210 aa	Known RBP	4.18	□□□□□ -1.74
PAN1	YIR006C	YIP1	P53039	248 aa		4.18	□□□□□ -1.74
PAN1	YIR006C	YMR210W	Q03649	449 aa		4.18	□□□□□ -1.74
PAN1	YIR006C	CGI121	Q03705	181 aa	Known RBP	4.18	□□□□□ -1.74
PAN1	YIR006C	GIS1	Q03833	894 aa		4.18	□□□□□ -1.74
PAN1	YIR006C	PFA4	Q12006	378 aa		4.18	□□□□□ -1.74
PAN1	YIR006C	YPR063C	Q12160	140 aa		4.18	□□□□□ -1.74
PAN1	YIR006C	RPL7B	Q12213	244 aa	Known RBP	4.18	□□□□□ -1.74
PAN1	YIR006C	PMD1	P32634	1753 aa		4.17	□□□□□ -1.74
PAN1	YIR006C	BEM2	P39960	2167 aa	Known RBP	4.17	□□□□□ -1.74
PAN1	YIR006C	MATALPHA1	P0CY06	175 aa		4.17	□□□□□ -1.74
PAN1	YIR006C	HMLALPHA1	P0CY07	175 aa		4.17	□□□□□ -1.74
PAN1	YIR006C	ERG24	P32462	438 aa	Known RBP	4.17	□□□□□ -1.74
PAN1	YIR006C	YIL029C	P40538	142 aa		4.17	□□□□□ -1.74
PAN1	YIR006C	AIM24	P47127	394 aa		4.17	□□□□□ -1.74
PAN1	YIR006C	RAD28	Q12021	506 aa		4.17	□□□□□ -1.74
PAN1	YIR006C	MET32	Q12041	191 aa		4.17	□□□□□ -1.74
PAN1	YIR006C	RLM1	Q12224	676 aa		4.17	□□□□□ -1.74
PAN1	YIR006C	IZH2	Q12442	317 aa		4.17	□□□□□ -1.74
PAN1	YIR006C	MES1	P00958	751 aa	Known RBP	4.17	□□□□□ -1.74
PAN1	YIR006C	RPS25B	P0C0T4	108 aa	Known RBP	4.17	□□□□□ -1.74
PAN1	YIR006C	ERG8	P24521	451 aa		4.17	□□□□□ -1.74
PAN1	YIR006C	PAD1	P33751	242 aa	Known RBP RIP-Chip data	4.17	□□□□□ -1.74	not detected
PAN1	YIR006C	RIM9	Q04734	239 aa		4.17	□□□□□ -1.74
PAN1	YIR006C	YOR105W	Q08504	108 aa		4.17	□□□□□ -1.74
PAN1	YIR006C	RPS25A	Q3E792	108 aa	Predicted RBP	4.17	□□□□□ -1.74
PAN1	YIR006C	CKS1	P20486	150 aa	Known RBP	4.17	□□□□□ -1.74
PAN1	YIR006C	NSA2	P40078	261 aa	Known RBP	4.17	□□□□□ -1.74
PAN1	YIR006C	ARP3	P47117	449 aa	Known RBP	4.17	□□□□□ -1.74
PAN1	YIR006C	UBC13	P52490	153 aa		4.17	□□□□□ -1.74
PAN1	YIR006C	WSC2	P53832	503 aa		4.17	□□□□□ -1.74
PAN1	YIR006C	SWS2	P53937	143 aa		4.17	□□□□□ -1.74
PAN1	YIR006C	HRD1	Q08109	551 aa		4.17	□□□□□ -1.74
PAN1	YIR006C	YPR022C	Q12139	1133 aa		4.17	□□□□□ -1.74
PAN1	YIR006C	DGK1	Q12382	290 aa		4.17	□□□□□ -1.74
PAN1	YIR006C	SET6	Q12529	373 aa		4.17	□□□□□ -1.74
PAN1	YIR006C	ANB1	P19211	157 aa		4.16	□□□□□ -1.74
PAN1	YIR006C	BAP2	P38084	609 aa		4.16	□□□□□ -1.74
PAN1	YIR006C	DOG1	P38774	246 aa		4.16	□□□□□ -1.74
PAN1	YIR006C	GEP4	P38812	185 aa		4.16	□□□□□ -1.74
PAN1	YIR006C	GAT2	P40209	560 aa		4.16	□□□□□ -1.74
PAN1	YIR006C	SDC1	Q03323	175 aa		4.16	□□□□□ -1.74
PAN1	YIR006C	PAL1	Q05518	499 aa	Known RBP	4.16	□□□□□ -1.74
PAN1	YIR006C	PML1	Q07930	204 aa	Predicted RBP	4.16	□□□□□ -1.74
PAN1	YIR006C	YIL134C-A	Q45U18	67 aa		4.16	□□□□□ -1.74
PAN1	YIR006C	YSR3	P23501	404 aa		4.16	□□□□□ -1.74
PAN1	YIR006C	ERG4	P25340	473 aa		4.16	□□□□□ -1.74
PAN1	YIR006C	NFS1	P25374	497 aa		4.16	□□□□□ -1.74
PAN1	YIR006C	SUR2	P38992	349 aa		4.16	□□□□□ -1.74
PAN1	YIR006C	SMD3	P43321	101 aa	Known RBP	4.16	□□□□□ -1.74
PAN1	YIR006C	HIT1	P46973	164 aa		4.16	□□□□□ -1.74
PAN1	YIR006C	ATG27	P46989	271 aa		4.16	□□□□□ -1.74
PAN1	YIR006C	ATG4	P53867	494 aa		4.16	□□□□□ -1.74
PAN1	YIR006C	APJ1	P53940	528 aa		4.16	□□□□□ -1.74
PAN1	YIR006C	THI74	Q04083	370 aa		4.16	□□□□□ -1.74
PAN1	YIR006C	CRR1	Q05790	422 aa		4.16	□□□□□ -1.74
PAN1	YIR006C	FMP49	A0A023PZB3	126 aa		4.16	□□□□□ -1.74
PAN1	YIR006C	RPB10	P22139	70 aa		4.16	□□□□□ -1.74
PAN1	YIR006C	POF1	P25576	258 aa		4.16	□□□□□ -1.74
PAN1	YIR006C	MOB2	P43563	287 aa		4.16	□□□□□ -1.74
PAN1	YIR006C	PIN3	Q06449	215 aa		4.16	□□□□□ -1.74
PAN1	YIR006C	MAK32	P23060	363 aa		4.15	□□□□□ -1.74
PAN1	YIR006C	DOG2	P38773	246 aa		4.15	□□□□□ -1.74
PAN1	YIR006C	CHS7	P38843	316 aa		4.15	□□□□□ -1.74
PAN1	YIR006C	MRPL35	Q06678	367 aa		4.15	□□□□□ -1.74
PAN1	YIR006C	MCH1	Q07376	486 aa		4.15	□□□□□ -1.74
PAN1	YIR006C	RNH203	Q12338	110 aa		4.15	□□□□□ -1.74
PAN1	YIR006C	TDH1	P00360	332 aa	Known RBP	4.15	□□□□□ -1.74
PAN1	YIR006C	MSI1	P13712	422 aa		4.15	□□□□□ -1.74
PAN1	YIR006C	FMP46	P36141	133 aa	Known RBP	4.15	□□□□□ -1.74
PAN1	YIR006C	VNX1	P42839	908 aa		4.15	□□□□□ -1.74
PAN1	YIR006C	RPL9B	P51401	191 aa	Known RBP	4.15	□□□□□ -1.74
PAN1	YIR006C	PAU4	P53427	120 aa		4.15	□□□□□ -1.74
PAN1	YIR006C	RRS1	Q08746	203 aa	Known RBP	4.15	□□□□□ -1.74
PAN1	YIR006C	RFM1	Q12192	310 aa		4.15	□□□□□ -1.74
PAN1	YIR006C	MCT1	Q12283	360 aa		4.15	□□□□□ -1.74
PAN1	YIR006C	GSC2	P40989	1895 aa		4.15	□□□□□ -1.74
PAN1	YIR006C	YLR302C	O13544	120 aa		4.15	□□□□□ -1.75
PAN1	YIR006C	NTC20	P38302	140 aa	Predicted RBP	4.15	□□□□□ -1.75
PAN1	YIR006C	YGR017W	P53210	297 aa		4.15	□□□□□ -1.75
PAN1	YIR006C	ADH6	Q04894	360 aa	Known RBP	4.15	□□□□□ -1.75
PAN1	YIR006C	LOA1	Q06508	300 aa		4.15	□□□□□ -1.75
PAN1	YIR006C	ERV1	P27882	189 aa		4.15	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 17.7 ms