RNA–Protein interactions for RNA: YHR150W

PEX28, Transcript of Peroxisomal integral membrane peroxin, yeastyeast

Gene PEX28, Length 1,740 nt, Biotype protein coding, Subcellular localisation Peroxisome .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PEX28YHR150W DIG2Q03373 323 aaKnown RBP6.53□□□□□ -1.36
PEX28YHR150W TGS1Q12052 315 aa6.53□□□□□ -1.36
PEX28YHR150W GLT1Q12680 2145 aaKnown RBP6.53□□□□□ -1.36
PEX28YHR150W ACC1Q00955 2233 aaKnown RBP6.53□□□□□ -1.36
PEX28YHR150W MDH2P22133 377 aa6.53□□□□□ -1.36
PEX28YHR150W YCR101CP25607 182 aa6.53□□□□□ -1.36
PEX28YHR150W ERG2P32352 222 aa6.53□□□□□ -1.36
PEX28YHR150W YBR013CP38215 129 aa6.53□□□□□ -1.36
PEX28YHR150W ERV15P38312 142 aa6.53□□□□□ -1.36
PEX28YHR150W TAX4P47030 604 aa6.53□□□□□ -1.36
PEX28YHR150W YAP1802P53309 568 aa6.53□□□□□ -1.36
PEX28YHR150W YMR082CQ04276 118 aa6.53□□□□□ -1.36
PEX28YHR150W TDA6Q06466 467 aa6.53□□□□□ -1.36
PEX28YHR150W TDH3P00359 332 aaKnown RBP RIP-Chip data6.52□□□□□ -1.37not detected
PEX28YHR150W CDC28P00546 298 aaKnown RBP6.52□□□□□ -1.37
PEX28YHR150W RPL30P14120 105 aaKnown RBP6.52□□□□□ -1.37
PEX28YHR150W SOF1P33750 489 aaKnown RBP6.52□□□□□ -1.37
PEX28YHR150W IMD2P38697 523 aaKnown RBP6.52□□□□□ -1.37
PEX28YHR150W SEN34P39707 275 aa6.52□□□□□ -1.37
PEX28YHR150W SLX9P53251 210 aaPredicted RBP6.52□□□□□ -1.37
PEX28YHR150W YNR066CP53752 436 aa6.52□□□□□ -1.37
PEX28YHR150W TSA2Q04120 196 aa6.52□□□□□ -1.37
PEX28YHR150W ASM4Q05166 528 aa6.52□□□□□ -1.37
PEX28YHR150W PIN2Q12057 282 aa6.52□□□□□ -1.37
PEX28YHR150W COA2Q3E823 68 aa6.52□□□□□ -1.37
PEX28YHR150W ELO2P25358 347 aa6.51□□□□□ -1.37
PEX28YHR150W LAC1P28496 418 aa6.51□□□□□ -1.37
PEX28YHR150W RPS0AP32905 252 aaKnown RBP6.51□□□□□ -1.37
PEX28YHR150W RPL14AP36105 138 aaKnown RBP6.51□□□□□ -1.37
PEX28YHR150W UBS1P38290 277 aa6.51□□□□□ -1.37
PEX28YHR150W YBR292CP38357 123 aa6.51□□□□□ -1.37
PEX28YHR150W RPL14BP38754 138 aaKnown RBP6.51□□□□□ -1.37
PEX28YHR150W XBP1P40489 647 aa6.51□□□□□ -1.37
PEX28YHR150W YNR048WP53740 393 aa6.51□□□□□ -1.37
PEX28YHR150W FYV6P53913 173 aa6.51□□□□□ -1.37
PEX28YHR150W RSM23Q01163 450 aa6.51□□□□□ -1.37
PEX28YHR150W MEH1Q02205 184 aa6.51□□□□□ -1.37
PEX28YHR150W ARL3Q02804 198 aa6.51□□□□□ -1.37
PEX28YHR150W MRP51Q02950 344 aa6.51□□□□□ -1.37
PEX28YHR150W HRI1Q05905 244 aaKnown RBP6.51□□□□□ -1.37
PEX28YHR150W AIM45Q12480 344 aaKnown RBP6.51□□□□□ -1.37
PEX28YHR150W AGC1Q12482 902 aa6.51□□□□□ -1.37
PEX28YHR150W CMC2Q3E7A4 109 aa6.51□□□□□ -1.37
PEX28YHR150W HFA1P32874 2273 aa6.51□□□□□ -1.37
PEX28YHR150W TOR2P32600 2474 aaKnown RBP6.51□□□□□ -1.37
PEX28YHR150W CDC7P06243 507 aa6.5□□□□□ -1.37
PEX28YHR150W VMA3P25515 160 aa6.5□□□□□ -1.37
PEX28YHR150W OCH1P31755 480 aa6.5□□□□□ -1.37
PEX28YHR150W SSS1P35179 80 aa6.5□□□□□ -1.37
PEX28YHR150W SLM6P38343 150 aa6.5□□□□□ -1.37
PEX28YHR150W POP2P39008 433 aa6.5□□□□□ -1.37
PEX28YHR150W TOK1P40310 691 aa6.5□□□□□ -1.37
PEX28YHR150W RPA34P47006 233 aaPredicted RBP6.5□□□□□ -1.37
PEX28YHR150W MSY1P48527 492 aa6.5□□□□□ -1.37
PEX28YHR150W BNS1P50084 137 aa6.5□□□□□ -1.37
PEX28YHR150W YGL262WP53054 175 aa6.5□□□□□ -1.37
PEX28YHR150W PEF1P53238 335 aa6.5□□□□□ -1.37
PEX28YHR150W MSO1P53604 210 aaKnown RBP6.5□□□□□ -1.37
PEX28YHR150W YMR090WQ04304 227 aaKnown RBP6.5□□□□□ -1.37
PEX28YHR150W HOF1Q05080 669 aa6.5□□□□□ -1.37
PEX28YHR150W YLR365WQ7LIF2 110 aa6.5□□□□□ -1.37
PEX28YHR150W PET494P07390 489 aaPredicted RBP6.5□□□□□ -1.37
PEX28YHR150W RPS16AP0CX51 143 aaKnown RBP6.5□□□□□ -1.37
PEX28YHR150W RPS16BP0CX52 143 aaKnown RBP6.5□□□□□ -1.37
PEX28YHR150W SEC59P20048 519 aa6.5□□□□□ -1.37
PEX28YHR150W AIM3P38266 947 aaKnown RBP6.5□□□□□ -1.37
PEX28YHR150W PAC2P39937 518 aa6.5□□□□□ -1.37
PEX28YHR150W GET2P40056 285 aa6.5□□□□□ -1.37
PEX28YHR150W PAU15P40585 124 aa6.5□□□□□ -1.37
PEX28YHR150W YGL114WP53134 725 aa6.5□□□□□ -1.37
PEX28YHR150W HHT1P61830 136 aa6.5□□□□□ -1.37
PEX28YHR150W YDR209CQ03480 137 aa6.5□□□□□ -1.37
PEX28YHR150W FSH2Q05015 223 aa6.5□□□□□ -1.37
PEX28YHR150W YDL242WQ07746 117 aa6.5□□□□□ -1.37
PEX28YHR150W YOR186WQ08560 144 aa6.5□□□□□ -1.37
PEX28YHR150W CSF1Q12150 2958 aa6.49□□□□□ -1.37
PEX28YHR150W YCR025CP25352 136 aa6.49□□□□□ -1.37
PEX28YHR150W POP5P28005 173 aa6.49□□□□□ -1.37
PEX28YHR150W PEX4P29340 183 aa6.49□□□□□ -1.37
PEX28YHR150W RPB7P34087 171 aa6.49□□□□□ -1.37
PEX28YHR150W NOP16P40007 231 aaKnown RBP6.49□□□□□ -1.37
PEX28YHR150W YIL169CP40442 995 aa6.49□□□□□ -1.37
PEX28YHR150W ALG12P53730 551 aa6.49□□□□□ -1.37
PEX28YHR150W YPR063CQ12160 140 aa6.49□□□□□ -1.37
PEX28YHR150W HUG1Q6Q5K6 68 aa6.49□□□□□ -1.37
PEX28YHR150W SLM1P40485 686 aa6.48□□□□□ -1.37
PEX28YHR150W YDR286CQ05530 114 aa6.48□□□□□ -1.37
PEX28YHR150W FCY22Q12119 530 aa6.48□□□□□ -1.37
PEX28YHR150W YPR108W-AQ3E7B3 70 aa6.48□□□□□ -1.37
PEX28YHR150W UPS2P35200 230 aa6.47□□□□□ -1.37
PEX28YHR150W MIA40P36046 403 aa6.47□□□□□ -1.37
PEX28YHR150W MGA1P53050 456 aa6.47□□□□□ -1.37
PEX28YHR150W YPL108WQ02872 168 aaPredicted RBP6.47□□□□□ -1.37
PEX28YHR150W CTR3Q06686 241 aa6.47□□□□□ -1.37
PEX28YHR150W THI72Q08579 599 aa6.47□□□□□ -1.37
PEX28YHR150W PRR2Q12310 699 aa6.47□□□□□ -1.37
PEX28YHR150W SME1Q12330 94 aaPredicted RBP6.47□□□□□ -1.37
PEX28YHR150W Q0144Q9ZZW2 109 aa6.47□□□□□ -1.37
PEX28YHR150W RPL25P04456 142 aaKnown RBP6.47□□□□□ -1.37
PEX28YHR150W SPO13P23624 291 aa6.47□□□□□ -1.37
Retrieved 100 of 5,963 RNA–protein pairs in 64.8 ms