RNA–Protein interactions for RNA: YGR074W

SMD1, Transcript of Core Sm protein Sm D1, yeastyeast

Gene SMD1, Length 441 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SMD1YGR074W JIP3O13555 125 aa1.39□□□□□ -2.19
SMD1YGR074W MED6P38782 295 aa1.39□□□□□ -2.19
SMD1YGR074W YJR146WP47174 117 aa1.39□□□□□ -2.19
SMD1YGR074W COS6P53344 381 aa1.39□□□□□ -2.19
SMD1YGR074W LSM7P53905 115 aaKnown RBP1.39□□□□□ -2.19
SMD1YGR074W YNL010WP53981 241 aaKnown RBP1.39□□□□□ -2.19
SMD1YGR074W GAS3Q03655 524 aa1.39□□□□□ -2.19
SMD1YGR074W FUS2Q05670 677 aa1.39□□□□□ -2.19
SMD1YGR074W VPS68Q12016 184 aa1.39□□□□□ -2.19
SMD1YGR074W EMC6Q12431 108 aa1.39□□□□□ -2.19
SMD1YGR074W CDC7P06243 507 aa1.38□□□□□ -2.19
SMD1YGR074W KSS1P14681 368 aa1.38□□□□□ -2.19
SMD1YGR074W MER1P16523 270 aa1.38□□□□□ -2.19
SMD1YGR074W SNF6P18888 332 aa1.38□□□□□ -2.19
SMD1YGR074W CAF4P36130 643 aa1.38□□□□□ -2.19
SMD1YGR074W IRC22P40006 225 aa1.38□□□□□ -2.19
SMD1YGR074W AIM25P47140 327 aa1.38□□□□□ -2.19
SMD1YGR074W NOP19P53317 196 aaPredicted RBP1.38□□□□□ -2.19
SMD1YGR074W RTC4P53850 401 aa1.38□□□□□ -2.19
SMD1YGR074W RGM1Q00453 211 aa1.38□□□□□ -2.19
SMD1YGR074W GPM2Q12008 311 aa1.38□□□□□ -2.19
SMD1YGR074W YOR283WQ12040 230 aaKnown RBP1.38□□□□□ -2.19
SMD1YGR074W TSC3Q3E790 80 aa1.38□□□□□ -2.19
SMD1YGR074W YHR214C-EQ8TGK0 99 aa1.38□□□□□ -2.19
SMD1YGR074W CHD1P32657 1468 aa1.37□□□□□ -2.19
SMD1YGR074W YHR139C-AO13536 103 aa1.37□□□□□ -2.19
SMD1YGR074W QCR7P00128 127 aa1.37□□□□□ -2.19
SMD1YGR074W YLR156WP0CE96 114 aa1.37□□□□□ -2.19
SMD1YGR074W YLR159WP0CE97 114 aa1.37□□□□□ -2.19
SMD1YGR074W YLR161WP0CE98 114 aa1.37□□□□□ -2.19
SMD1YGR074W URA5P13298 226 aaKnown RBP1.37□□□□□ -2.19
SMD1YGR074W FBA1P14540 359 aaKnown RBP1.37□□□□□ -2.19
SMD1YGR074W MAG1P22134 296 aaKnown RBP1.37□□□□□ -2.19
SMD1YGR074W BET1P22804 142 aa1.37□□□□□ -2.19
SMD1YGR074W SCO1P23833 295 aa1.37□□□□□ -2.19
SMD1YGR074W MDH3P32419 343 aaKnown RBP RIP-Chip data1.37□□□□□ -2.19not detected
SMD1YGR074W ERV15P38312 142 aa1.37□□□□□ -2.19
SMD1YGR074W AIM2P39721 246 aa1.37□□□□□ -2.19
SMD1YGR074W HMF1P40037 129 aaKnown RBP1.37□□□□□ -2.19
SMD1YGR074W PGD1P40356 397 aa1.37□□□□□ -2.19
SMD1YGR074W AIF1P52923 378 aa1.37□□□□□ -2.19
SMD1YGR074W ERG25P53045 309 aa1.37□□□□□ -2.19
SMD1YGR074W CAB4P53332 305 aa1.37□□□□□ -2.19
SMD1YGR074W NEJ1Q06148 342 aa1.37□□□□□ -2.19
SMD1YGR074W YPL162CQ12042 273 aa1.37□□□□□ -2.19
SMD1YGR074W PSF1Q12488 208 aa1.37□□□□□ -2.19
SMD1YGR074W SIR2P06700 562 aa1.36□□□□□ -2.19
SMD1YGR074W SEC4P07560 215 aaKnown RBP1.36□□□□□ -2.19
SMD1YGR074W GRX2P17695 143 aaKnown RBP1.36□□□□□ -2.19
SMD1YGR074W CKS1P20486 150 aaKnown RBP1.36□□□□□ -2.19
SMD1YGR074W TCA17P32613 152 aa1.36□□□□□ -2.19
SMD1YGR074W SHG1P38337 142 aa1.36□□□□□ -2.19
SMD1YGR074W SEC72P39742 193 aaKnown RBP1.36□□□□□ -2.19
SMD1YGR074W GLE2P40066 365 aa1.36□□□□□ -2.19
SMD1YGR074W YGR050CP53231 118 aa1.36□□□□□ -2.19
SMD1YGR074W COG5P53951 403 aa1.36□□□□□ -2.19
SMD1YGR074W MRPS8Q03799 155 aa1.36□□□□□ -2.19
SMD1YGR074W GGA1Q06336 557 aa1.36□□□□□ -2.19
SMD1YGR074W ARR2Q06597 130 aa1.36□□□□□ -2.19
SMD1YGR074W REP2P03872 296 aa1.35□□□□□ -2.19
SMD1YGR074W PEX4P29340 183 aa1.35□□□□□ -2.19
SMD1YGR074W ATP7P30902 174 aa1.35□□□□□ -2.19
SMD1YGR074W SNC2P33328 115 aa1.35□□□□□ -2.19
SMD1YGR074W YOR062CP36025 268 aa1.35□□□□□ -2.19
SMD1YGR074W CTR2P38865 189 aa1.35□□□□□ -2.19
SMD1YGR074W VTC1P40046 129 aaRIP-Chip data1.35□□□□□ -2.19not detected
SMD1YGR074W ICE2P40499 491 aa1.35□□□□□ -2.19
SMD1YGR074W YKE4P40544 346 aa1.35□□□□□ -2.19
SMD1YGR074W RPL33BP41056 107 aaKnown RBP1.35□□□□□ -2.19
SMD1YGR074W DAD3P69850 94 aa1.35□□□□□ -2.19
SMD1YGR074W SWP1Q02795 286 aa1.35□□□□□ -2.19
SMD1YGR074W TLG1Q03322 224 aa1.35□□□□□ -2.19
SMD1YGR074W YET3Q07451 203 aa1.35□□□□□ -2.19
SMD1YGR074W MEU1Q07938 337 aaKnown RBP RIP-Chip data1.35□□□□□ -2.19not detected
SMD1YGR074W YLR036CQ07986 203 aa1.35□□□□□ -2.19
SMD1YGR074W YOL160WQ08321 113 aa1.35□□□□□ -2.19
SMD1YGR074W YNG1Q08465 219 aa1.35□□□□□ -2.19
SMD1YGR074W USB1Q12208 290 aaKnown RBP1.35□□□□□ -2.19
SMD1YGR074W YDL085C-AQ3E7B7 68 aaKnown RBP1.35□□□□□ -2.19
SMD1YGR074W YCL012CQ8J0M4 134 aa1.35□□□□□ -2.19
SMD1YGR074W YFR032C-BQ8TGU2 87 aa1.35□□□□□ -2.19
SMD1YGR074W IGO2Q9P305 131 aa1.35□□□□□ -2.19
SMD1YGR074W IKI3Q06706 1349 aaKnown RBP1.35□□□□□ -2.19
SMD1YGR074W TIM9O74700 87 aa1.34□□□□□ -2.19
SMD1YGR074W MRS1P07266 363 aa1.34□□□□□ -2.19
SMD1YGR074W TRX3P25372 127 aa1.34□□□□□ -2.19
SMD1YGR074W YET1P35723 206 aa1.34□□□□□ -2.19
SMD1YGR074W PHO88P38264 188 aaPredicted RBP1.34□□□□□ -2.19
SMD1YGR074W PDS1P40316 373 aaPredicted RBP1.34□□□□□ -2.19
SMD1YGR074W GVP36P40531 326 aaKnown RBP1.34□□□□□ -2.19
SMD1YGR074W TIR3P40552 269 aa1.34□□□□□ -2.19
SMD1YGR074W SMD3P43321 101 aaKnown RBP1.34□□□□□ -2.19
SMD1YGR074W EAF6P47128 113 aa1.34□□□□□ -2.19
SMD1YGR074W PET191Q02772 108 aa1.34□□□□□ -2.19
SMD1YGR074W CGI121Q03705 181 aaKnown RBP1.34□□□□□ -2.19
SMD1YGR074W SNF4P12904 322 aa1.33□□□□□ -2.2
SMD1YGR074W RPB3P16370 318 aaKnown RBP1.33□□□□□ -2.2
SMD1YGR074W TAH1P25638 111 aaPredicted RBP1.33□□□□□ -2.2
SMD1YGR074W YCR090CP25654 182 aaKnown RBP1.33□□□□□ -2.2
SMD1YGR074W ASF2P32448 525 aaPredicted RBP1.33□□□□□ -2.2
Retrieved 100 of 5,963 RNA–protein pairs in 25.9 ms