RNA–Protein interactions for RNA: YGL213C

SKI8, Transcript of Ski complex component and WD-repeat protein, yeast

Gene SKI8, Length 1,194 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SKI8	YGL213C	MRS1	P07266	363 aa		3.42	□□□□□ -1.86
SKI8	YGL213C	FBA1	P14540	359 aa	Known RBP	3.42	□□□□□ -1.86
SKI8	YGL213C	RAD51	P25454	400 aa		3.42	□□□□□ -1.86
SKI8	YGL213C	SHG1	P38337	142 aa		3.42	□□□□□ -1.86
SKI8	YGL213C	YJL144W	P47009	104 aa		3.42	□□□□□ -1.86
SKI8	YGL213C	RPL9B	P51401	191 aa	Known RBP	3.42	□□□□□ -1.86
SKI8	YGL213C	YGR050C	P53231	118 aa		3.42	□□□□□ -1.86
SKI8	YGL213C	CAB4	P53332	305 aa		3.42	□□□□□ -1.86
SKI8	YGL213C	RTC4	P53850	401 aa		3.42	□□□□□ -1.86
SKI8	YGL213C	GIM5	Q04493	163 aa		3.42	□□□□□ -1.86
SKI8	YGL213C	AKR2	Q12013	749 aa		3.42	□□□□□ -1.86
SKI8	YGL213C	CMC2	Q3E7A4	109 aa		3.42	□□□□□ -1.86
SKI8	YGL213C	IGO2	Q9P305	131 aa		3.42	□□□□□ -1.86
SKI8	YGL213C	SNF6	P18888	332 aa		3.41	□□□□□ -1.86
SKI8	YGL213C	SPO73	P40031	143 aa		3.41	□□□□□ -1.86
SKI8	YGL213C	HMF1	P40037	129 aa	Known RBP	3.41	□□□□□ -1.86
SKI8	YGL213C	DSK2	P48510	373 aa		3.41	□□□□□ -1.86
SKI8	YGL213C	RDS3	Q06835	107 aa	Predicted RBP	3.41	□□□□□ -1.86
SKI8	YGL213C	YPL162C	Q12042	273 aa		3.41	□□□□□ -1.86
SKI8	YGL213C	USB1	Q12208	290 aa	Known RBP	3.41	□□□□□ -1.86
SKI8	YGL213C	CDC8	P00572	216 aa		3.4	□□□□□ -1.87
SKI8	YGL213C	PUT1	P09368	476 aa		3.4	□□□□□ -1.87
SKI8	YGL213C	YLR156W	P0CE96	114 aa		3.4	□□□□□ -1.87
SKI8	YGL213C	YLR159W	P0CE97	114 aa		3.4	□□□□□ -1.87
SKI8	YGL213C	YLR161W	P0CE98	114 aa		3.4	□□□□□ -1.87
SKI8	YGL213C	MAG1	P22134	296 aa	Known RBP	3.4	□□□□□ -1.87
SKI8	YGL213C	ECM4	P36156	370 aa		3.4	□□□□□ -1.87
SKI8	YGL213C	YHL026C	P38740	315 aa		3.4	□□□□□ -1.87
SKI8	YGL213C	POG1	P40473	351 aa		3.4	□□□□□ -1.87
SKI8	YGL213C	ERG10	P41338	398 aa	Known RBP	3.4	□□□□□ -1.87
SKI8	YGL213C	COG5	P53951	403 aa		3.4	□□□□□ -1.87
SKI8	YGL213C	NOC4	Q06512	552 aa	Predicted RBP	3.4	□□□□□ -1.87
SKI8	YGL213C	PSF1	Q12488	208 aa		3.4	□□□□□ -1.87
SKI8	YGL213C	RPL26A	P05743	127 aa	Known RBP	3.39	□□□□□ -1.87
SKI8	YGL213C	SIR2	P06700	562 aa		3.39	□□□□□ -1.87
SKI8	YGL213C	RME1	P32338	300 aa	Known RBP	3.39	□□□□□ -1.87
SKI8	YGL213C	SCM4	P32564	187 aa		3.39	□□□□□ -1.87
SKI8	YGL213C	SDH4	P37298	181 aa		3.39	□□□□□ -1.87
SKI8	YGL213C	PDS1	P40316	373 aa	Predicted RBP	3.39	□□□□□ -1.87
SKI8	YGL213C	SMD3	P43321	101 aa	Known RBP	3.39	□□□□□ -1.87
SKI8	YGL213C	SNX4	P47057	423 aa		3.39	□□□□□ -1.87
SKI8	YGL213C	RPL26B	P53221	127 aa	Known RBP	3.39	□□□□□ -1.87
SKI8	YGL213C	SNO1	Q03144	224 aa		3.39	□□□□□ -1.87
SKI8	YGL213C	MHT1	Q12525	324 aa		3.39	□□□□□ -1.87
SKI8	YGL213C	IKI3	Q06706	1349 aa	Known RBP	3.39	□□□□□ -1.87
SKI8	YGL213C	MSW1	P04803	379 aa		3.38	□□□□□ -1.87
SKI8	YGL213C	TAH1	P25638	111 aa	Predicted RBP	3.38	□□□□□ -1.87
SKI8	YGL213C	VPS51	P36116	164 aa		3.38	□□□□□ -1.87
SKI8	YGL213C	UTP30	P36144	274 aa	Known RBP	3.38	□□□□□ -1.87
SKI8	YGL213C	CTR2	P38865	189 aa		3.38	□□□□□ -1.87
SKI8	YGL213C	APJ1	P53940	528 aa		3.38	□□□□□ -1.87
SKI8	YGL213C	SUE1	Q06524	206 aa		3.38	□□□□□ -1.87
SKI8	YGL213C	YLR036C	Q07986	203 aa		3.38	□□□□□ -1.87
SKI8	YGL213C	QCR6	P00127	147 aa		3.37	□□□□□ -1.87
SKI8	YGL213C	REP2	P03872	296 aa		3.37	□□□□□ -1.87
SKI8	YGL213C	GRX2	P17695	143 aa	Known RBP	3.37	□□□□□ -1.87
SKI8	YGL213C	TRX3	P25372	127 aa		3.37	□□□□□ -1.87
SKI8	YGL213C	NRK1	P53915	240 aa		3.37	□□□□□ -1.87
SKI8	YGL213C	SLM2	P53955	656 aa		3.37	□□□□□ -1.87
SKI8	YGL213C	PRM15	Q03262	622 aa		3.37	□□□□□ -1.87
SKI8	YGL213C	TRM12	Q04235	462 aa		3.37	□□□□□ -1.87
SKI8	YGL213C	GRX8	Q05926	109 aa		3.37	□□□□□ -1.87
SKI8	YGL213C	YOL024W	Q08172	172 aa		3.37	□□□□□ -1.87
SKI8	YGL213C	YFR032C-B	Q8TGU2	87 aa		3.37	□□□□□ -1.87
SKI8	YGL213C	YIL177C	P40434	1758 aa		3.36	□□□□□ -1.87
SKI8	YGL213C	YJL225C	P40889	1758 aa		3.36	□□□□□ -1.87
SKI8	YGL213C	GCY1	P14065	312 aa	Known RBP RIP-Chip data	3.36	□□□□□ -1.87	not detected
SKI8	YGL213C	SEC17	P32602	292 aa		3.36	□□□□□ -1.87
SKI8	YGL213C	SRP14	P38985	146 aa		3.36	□□□□□ -1.87
SKI8	YGL213C	GLE2	P40066	365 aa		3.36	□□□□□ -1.87
SKI8	YGL213C	MNN5	P46982	586 aa		3.36	□□□□□ -1.87
SKI8	YGL213C	YJR146W	P47174	117 aa		3.36	□□□□□ -1.87
SKI8	YGL213C	YIP3	P53633	176 aa		3.36	□□□□□ -1.87
SKI8	YGL213C	ARO80	Q04052	950 aa		3.36	□□□□□ -1.87
SKI8	YGL213C	FUS2	Q05670	677 aa		3.36	□□□□□ -1.87
SKI8	YGL213C	GGA1	Q06336	557 aa		3.36	□□□□□ -1.87
SKI8	YGL213C	RPL35A	P0CX84	120 aa	Known RBP	3.35	□□□□□ -1.87
SKI8	YGL213C	RPL35B	P0CX85	120 aa	Known RBP	3.35	□□□□□ -1.87
SKI8	YGL213C	BET1	P22804	142 aa		3.35	□□□□□ -1.87
SKI8	YGL213C	TRR1	P29509	319 aa	Known RBP	3.35	□□□□□ -1.87
SKI8	YGL213C	MRPL49	P40858	161 aa	Predicted RBP	3.35	□□□□□ -1.87
SKI8	YGL213C	MCP1	Q12106	302 aa		3.35	□□□□□ -1.87
SKI8	YGL213C	URA5	P13298	226 aa	Known RBP	3.34	□□□□□ -1.87
SKI8	YGL213C	SCO1	P23833	295 aa		3.34	□□□□□ -1.87
SKI8	YGL213C	ARC19	P33204	171 aa	Known RBP	3.34	□□□□□ -1.87
SKI8	YGL213C	AIF1	P52923	378 aa		3.34	□□□□□ -1.87
SKI8	YGL213C	YNL184C	P53876	108 aa		3.34	□□□□□ -1.87
SKI8	YGL213C	YDR249C	Q03787	373 aa		3.34	□□□□□ -1.87
SKI8	YGL213C	YDL085C-A	Q3E7B7	68 aa	Known RBP	3.34	□□□□□ -1.87
SKI8	YGL213C	MBF1	O14467	151 aa	Known RBP	3.33	□□□□□ -1.88
SKI8	YGL213C	RPB3	P16370	318 aa	Known RBP	3.33	□□□□□ -1.88
SKI8	YGL213C	CKS1	P20486	150 aa	Known RBP	3.33	□□□□□ -1.88
SKI8	YGL213C	SWP1	Q02795	286 aa		3.33	□□□□□ -1.88
SKI8	YGL213C	MIX17	Q03667	156 aa		3.33	□□□□□ -1.88
SKI8	YGL213C	ARR2	Q06597	130 aa		3.33	□□□□□ -1.88
SKI8	YGL213C	ATO3	Q12359	275 aa		3.33	□□□□□ -1.88
SKI8	YGL213C	TSC3	Q3E790	80 aa		3.33	□□□□□ -1.88
SKI8	YGL213C	NEJ1	Q06148	342 aa		3.32	□□□□□ -1.88
SKI8	YGL213C	HRT1	Q08273	121 aa		3.32	□□□□□ -1.88
SKI8	YGL213C	TIM9	O74700	87 aa		3.31	□□□□□ -1.88

Retrieved 100 of 5,963 RNA–protein pairs in 93.7 ms