RNA–Protein interactions for RNA: YFR002W

NIC96, Transcript of Linker nucleoporin component of the nuclear pore complex (NPC), yeastyeast

Gene NIC96, Length 2,520 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NIC96YFR002W API2Q04413 109 aa1.69□□□□□ -2.14
NIC96YFR002W DXO1Q06349 442 aa1.69□□□□□ -2.14
NIC96YFR002W YPR147CQ06522 304 aaKnown RBP1.69□□□□□ -2.14
NIC96YFR002W MSA1Q08471 629 aa1.69□□□□□ -2.14
NIC96YFR002W TRM10Q12400 293 aa1.69□□□□□ -2.14
NIC96YFR002W BEM2P39960 2167 aaKnown RBP1.68□□□□□ -2.14
NIC96YFR002W YHR139C-AO13536 103 aa1.68□□□□□ -2.14
NIC96YFR002W YOL163WP0CF20 169 aa1.68□□□□□ -2.14
NIC96YFR002W URA6P15700 204 aa1.68□□□□□ -2.14
NIC96YFR002W ERD2P18414 219 aa1.68□□□□□ -2.14
NIC96YFR002W DBF2P22204 572 aa1.68□□□□□ -2.14
NIC96YFR002W AGA2P32781 87 aa1.68□□□□□ -2.14
NIC96YFR002W GRE3P38715 327 aaKnown RBP RIP-Chip data1.68□□□□□ -2.14not detected
NIC96YFR002W EFM1P38732 585 aa1.68□□□□□ -2.14
NIC96YFR002W TRM5P38793 499 aa1.68□□□□□ -2.14
NIC96YFR002W YER121WP40076 114 aa1.68□□□□□ -2.14
NIC96YFR002W YIL012WP40551 113 aa1.68□□□□□ -2.14
NIC96YFR002W YJR141WP47172 347 aaPredicted RBP1.68□□□□□ -2.14
NIC96YFR002W MRH4P53166 561 aa1.68□□□□□ -2.14
NIC96YFR002W AAH1P53909 347 aa1.68□□□□□ -2.14
NIC96YFR002W INP1Q03694 420 aa1.68□□□□□ -2.14
NIC96YFR002W YPR195CQ06594 109 aa1.68□□□□□ -2.14
NIC96YFR002W RRP40Q08285 240 aaKnown RBP1.68□□□□□ -2.14
NIC96YFR002W YOR186WQ08560 144 aa1.68□□□□□ -2.14
NIC96YFR002W USB1Q12208 290 aaKnown RBP1.68□□□□□ -2.14
NIC96YFR002W MRX4Q12467 430 aa1.68□□□□□ -2.14
NIC96YFR002W PDR18P53756 1333 aa1.68□□□□□ -2.14
NIC96YFR002W CAT2P32796 670 aaKnown RBP1.68□□□□□ -2.14
NIC96YFR002W UBC6P33296 250 aaPredicted RBP1.68□□□□□ -2.14
NIC96YFR002W COG3P40094 801 aa1.68□□□□□ -2.14
NIC96YFR002W PRP24P49960 444 aaKnown RBP1.68□□□□□ -2.14
NIC96YFR002W MMS2P53152 137 aa1.68□□□□□ -2.14
NIC96YFR002W YNG1Q08465 219 aa1.68□□□□□ -2.14
NIC96YFR002W COX5AP00424 153 aa1.67□□□□□ -2.14
NIC96YFR002W ARN2P38724 620 aa1.67□□□□□ -2.14
NIC96YFR002W ECM34P38728 170 aa1.67□□□□□ -2.14
NIC96YFR002W MED6P38782 295 aa1.67□□□□□ -2.14
NIC96YFR002W GGC1P38988 300 aa1.67□□□□□ -2.14
NIC96YFR002W PDR17P53844 350 aa1.67□□□□□ -2.14
NIC96YFR002W FYV6P53913 173 aa1.67□□□□□ -2.14
NIC96YFR002W SNO1Q03144 224 aa1.67□□□□□ -2.14
NIC96YFR002W ECM19Q06011 112 aa1.67□□□□□ -2.14
NIC96YFR002W YDL144CQ07589 356 aa1.67□□□□□ -2.14
NIC96YFR002W CDC28P00546 298 aaKnown RBP1.67□□□□□ -2.14
NIC96YFR002W RSA4P25382 515 aaKnown RBP1.67□□□□□ -2.14
NIC96YFR002W RPB9P27999 122 aa1.67□□□□□ -2.14
NIC96YFR002W OAC1P32332 324 aa1.67□□□□□ -2.14
NIC96YFR002W ACP1P32463 125 aa1.67□□□□□ -2.14
NIC96YFR002W PEX17P40155 199 aa1.67□□□□□ -2.14
NIC96YFR002W YMR144WP40214 342 aaKnown RBP1.67□□□□□ -2.14
NIC96YFR002W YKE4P40544 346 aa1.67□□□□□ -2.14
NIC96YFR002W MRPL49P40858 161 aaPredicted RBP1.67□□□□□ -2.14
NIC96YFR002W HST4P53688 370 aa1.67□□□□□ -2.14
NIC96YFR002W PRM15Q03262 622 aa1.67□□□□□ -2.14
NIC96YFR002W YMR279CQ03263 540 aa1.67□□□□□ -2.14
NIC96YFR002W YML096WQ04489 525 aa1.67□□□□□ -2.14
NIC96YFR002W YOL029CQ08187 201 aa1.67□□□□□ -2.14
NIC96YFR002W SYC1Q08553 188 aaPredicted RBP1.67□□□□□ -2.14
NIC96YFR002W YPL150WQ12152 901 aa1.67□□□□□ -2.14
NIC96YFR002W CKA2P19454 339 aa1.66□□□□□ -2.14
NIC96YFR002W EPT1P22140 391 aa1.66□□□□□ -2.14
NIC96YFR002W ZRT3P34240 503 aa1.66□□□□□ -2.14
NIC96YFR002W CSG2P35206 410 aa1.66□□□□□ -2.14
NIC96YFR002W VPS51P36116 164 aa1.66□□□□□ -2.14
NIC96YFR002W RRT13P40042 185 aa1.66□□□□□ -2.14
NIC96YFR002W YNL140CP53910 189 aa1.66□□□□□ -2.14
NIC96YFR002W PET191Q02772 108 aa1.66□□□□□ -2.14
NIC96YFR002W DFM1Q12743 341 aaKnown RBP1.66□□□□□ -2.14
NIC96YFR002W GCY1P14065 312 aaKnown RBP RIP-Chip data1.66□□□□□ -2.14not detected
NIC96YFR002W YAK1P14680 807 aa1.66□□□□□ -2.14
NIC96YFR002W MRPL28P36527 147 aa1.66□□□□□ -2.14
NIC96YFR002W MRPL39P36533 70 aa1.66□□□□□ -2.14
NIC96YFR002W SUR2P38992 349 aa1.66□□□□□ -2.14
NIC96YFR002W AVT6P40074 448 aa1.66□□□□□ -2.14
NIC96YFR002W SLX9P53251 210 aaPredicted RBP1.66□□□□□ -2.14
NIC96YFR002W YLR460CP54007 376 aa1.66□□□□□ -2.14
NIC96YFR002W YPL039WQ03080 316 aa1.66□□□□□ -2.14
NIC96YFR002W EMI1Q04406 187 aa1.66□□□□□ -2.14
NIC96YFR002W YPR011CQ12251 326 aa1.66□□□□□ -2.14
NIC96YFR002W TIM22Q12328 207 aa1.66□□□□□ -2.14
NIC96YFR002W ATG5Q12380 294 aa1.66□□□□□ -2.14
NIC96YFR002W YAL067W-AQ8TGK6 75 aa1.66□□□□□ -2.14
NIC96YFR002W VPS13Q07878 3144 aa1.65□□□□□ -2.14
NIC96YFR002W ERG2P32352 222 aa1.65□□□□□ -2.15
NIC96YFR002W YBL081WP38180 368 aaKnown RBP1.65□□□□□ -2.15
NIC96YFR002W FES1P38260 290 aa1.65□□□□□ -2.15
NIC96YFR002W BXI1P48558 297 aa1.65□□□□□ -2.15
NIC96YFR002W NRK1P53915 240 aa1.65□□□□□ -2.15
NIC96YFR002W YDR248CQ03786 193 aa1.65□□□□□ -2.15
NIC96YFR002W ARO80Q04052 950 aa1.65□□□□□ -2.15
NIC96YFR002W AGC1Q12482 902 aa1.65□□□□□ -2.15
NIC96YFR002W YBL112CQ3E7Y4 105 aa1.65□□□□□ -2.15
NIC96YFR002W SEC4P07560 215 aaKnown RBP1.65□□□□□ -2.15
NIC96YFR002W PUT1P09368 476 aa1.65□□□□□ -2.15
NIC96YFR002W GCN3P14741 305 aa1.65□□□□□ -2.15
NIC96YFR002W CPT1P17898 393 aa1.65□□□□□ -2.15
NIC96YFR002W YKR041WP36134 250 aa1.65□□□□□ -2.15
NIC96YFR002W AME1P38313 324 aa1.65□□□□□ -2.15
NIC96YFR002W PHO89P38361 574 aa1.65□□□□□ -2.15
NIC96YFR002W EDC2P40023 145 aaPredicted RBP1.65□□□□□ -2.15
Retrieved 100 of 5,963 RNA–protein pairs in 27.5 ms