RNA–Protein interactions for RNA: YFL008W

SMC1, Transcript of Subunit of the multiprotein cohesin complex, yeastyeast

Gene SMC1, Length 3,678 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SMC1YFL008W SSS1P35179 80 aa0.85□□□□□ -2.27
SMC1YFL008W UPS2P35200 230 aa0.85□□□□□ -2.27
SMC1YFL008W JEN1P36035 616 aa0.85□□□□□ -2.27
SMC1YFL008W DOA1P36037 715 aa0.85□□□□□ -2.27
SMC1YFL008W SKG1P36169 355 aa0.85□□□□□ -2.27
SMC1YFL008W PRS2P38620 318 aaKnown RBP0.85□□□□□ -2.27
SMC1YFL008W RPF1P38805 295 aaKnown RBP0.85□□□□□ -2.27
SMC1YFL008W FIS1P40515 155 aa0.85□□□□□ -2.27
SMC1YFL008W AGX1P43567 385 aa0.85□□□□□ -2.27
SMC1YFL008W YAR1P46683 200 aa0.85□□□□□ -2.27
SMC1YFL008W PMT4P46971 762 aa0.85□□□□□ -2.27
SMC1YFL008W YJL016WP47072 561 aa0.85□□□□□ -2.27
SMC1YFL008W HSH155P49955 971 aaKnown RBP0.85□□□□□ -2.27
SMC1YFL008W ERV14P53173 138 aa0.85□□□□□ -2.27
SMC1YFL008W JAC1P53193 184 aa0.85□□□□□ -2.27
SMC1YFL008W COG7P53195 279 aa0.85□□□□□ -2.27
SMC1YFL008W CDC14Q00684 551 aa0.85□□□□□ -2.27
SMC1YFL008W YPL113CQ02961 396 aa0.85□□□□□ -2.27
SMC1YFL008W YMR099CQ03161 297 aaKnown RBP0.85□□□□□ -2.27
SMC1YFL008W MAK3Q03503 176 aa0.85□□□□□ -2.27
SMC1YFL008W YMR010WQ03687 405 aa0.85□□□□□ -2.27
SMC1YFL008W YLR173WQ06247 608 aa0.85□□□□□ -2.27
SMC1YFL008W PRP11Q07350 266 aaPredicted RBP0.85□□□□□ -2.27
SMC1YFL008W YPR202WQ08993 238 aa0.85□□□□□ -2.27
SMC1YFL008W BTS1Q12051 335 aa0.85□□□□□ -2.27
SMC1YFL008W FMP16Q12497 93 aa0.85□□□□□ -2.27
SMC1YFL008W TFB5Q3E7C1 72 aaPredicted RBP0.85□□□□□ -2.27
SMC1YFL008W SRN2Q99176 213 aa0.85□□□□□ -2.27
SMC1YFL008W RIB3Q99258 208 aa0.85□□□□□ -2.27
SMC1YFL008W FSH3Q99369 266 aa0.85□□□□□ -2.27
SMC1YFL008W CDC33P07260 213 aaKnown RBP0.85□□□□□ -2.27
SMC1YFL008W MRP1P10662 321 aaKnown RBP0.85□□□□□ -2.27
SMC1YFL008W ERD1P16151 362 aa0.85□□□□□ -2.27
SMC1YFL008W FUN14P18411 198 aa0.85□□□□□ -2.27
SMC1YFL008W EPT1P22140 391 aa0.85□□□□□ -2.27
SMC1YFL008W AHC2P25649 128 aa0.85□□□□□ -2.27
SMC1YFL008W PPA2P28239 310 aa0.85□□□□□ -2.27
SMC1YFL008W TCA17P32613 152 aa0.85□□□□□ -2.27
SMC1YFL008W DAD2P36162 133 aa0.85□□□□□ -2.27
SMC1YFL008W HMT1P38074 348 aa0.85□□□□□ -2.27
SMC1YFL008W AVT6P40074 448 aa0.85□□□□□ -2.27
SMC1YFL008W RFC4P40339 323 aaKnown RBP0.85□□□□□ -2.27
SMC1YFL008W BMT5P40493 336 aa0.85□□□□□ -2.27
SMC1YFL008W AVT7P40501 490 aa0.85□□□□□ -2.27
SMC1YFL008W HOC1P47124 396 aa0.85□□□□□ -2.27
SMC1YFL008W EAF6P47128 113 aa0.85□□□□□ -2.27
SMC1YFL008W AIM25P47140 327 aa0.85□□□□□ -2.27
SMC1YFL008W YGL114WP53134 725 aa0.85□□□□□ -2.27
SMC1YFL008W SYF2P53277 215 aaPredicted RBP0.85□□□□□ -2.27
SMC1YFL008W YGR168CP53293 376 aa0.85□□□□□ -2.27
SMC1YFL008W YNR064CP53750 290 aa0.85□□□□□ -2.27
SMC1YFL008W HHT1P61830 136 aa0.85□□□□□ -2.27
SMC1YFL008W YDR366CP87287 132 aa0.85□□□□□ -2.27
SMC1YFL008W YDR248CQ03786 193 aa0.85□□□□□ -2.27
SMC1YFL008W TAF9Q05027 157 aa0.85□□□□□ -2.27
SMC1YFL008W COA4Q05809 96 aa0.85□□□□□ -2.27
SMC1YFL008W DCR2Q05924 578 aa0.85□□□□□ -2.27
SMC1YFL008W LIP2Q06005 328 aa0.85□□□□□ -2.27
SMC1YFL008W CTS2Q06350 511 aa0.85□□□□□ -2.27
SMC1YFL008W CUR1Q06469 252 aa0.85□□□□□ -2.27
SMC1YFL008W MRX9Q07349 420 aaKnown RBP0.85□□□□□ -2.27
SMC1YFL008W YLR012CQ07927 99 aa0.85□□□□□ -2.27
SMC1YFL008W WIP1Q2V2P8 89 aa0.85□□□□□ -2.27
SMC1YFL008W SLO1Q3E784 85 aa0.85□□□□□ -2.27
SMC1YFL008W MHF2Q3E829 80 aa0.85□□□□□ -2.27
SMC1YFL008W HAP2P06774 265 aa0.85□□□□□ -2.27
SMC1YFL008W ADK1P07170 222 aaKnown RBP0.85□□□□□ -2.27
SMC1YFL008W ADH3P07246 375 aaKnown RBP0.85□□□□□ -2.27
SMC1YFL008W TOM40P23644 387 aaKnown RBP0.85□□□□□ -2.27
SMC1YFL008W CNB1P25296 175 aa0.85□□□□□ -2.27
SMC1YFL008W ADE1P27616 306 aa0.85□□□□□ -2.27
SMC1YFL008W EHD3P28817 500 aa0.85□□□□□ -2.27
SMC1YFL008W MDH3P32419 343 aaKnown RBP RIP-Chip data0.85□□□□□ -2.27not detected
SMC1YFL008W PPQ1P32945 549 aa0.85□□□□□ -2.27
SMC1YFL008W YUH1P35127 236 aa0.85□□□□□ -2.27
SMC1YFL008W CSG2P35206 410 aa0.85□□□□□ -2.27
SMC1YFL008W YKL162CP36052 402 aa0.85□□□□□ -2.27
SMC1YFL008W DRE2P36152 348 aa0.85□□□□□ -2.27
SMC1YFL008W MRPL11P36521 249 aaPredicted RBP0.85□□□□□ -2.27
SMC1YFL008W ECM8P38246 354 aa0.85□□□□□ -2.27
SMC1YFL008W SSH1P38353 490 aaKnown RBP0.85□□□□□ -2.27
SMC1YFL008W PRS3P38689 320 aaKnown RBP0.85□□□□□ -2.27
SMC1YFL008W ARN2P38724 620 aa0.85□□□□□ -2.27
SMC1YFL008W EFM1P38732 585 aa0.85□□□□□ -2.27
SMC1YFL008W TRR2P38816 342 aa0.85□□□□□ -2.27
SMC1YFL008W RPB11P38902 120 aa0.85□□□□□ -2.27
SMC1YFL008W IPT1P38954 527 aa0.85□□□□□ -2.27
SMC1YFL008W ALP1P38971 573 aa0.85□□□□□ -2.27
SMC1YFL008W GDI1P39958 451 aaKnown RBP0.85□□□□□ -2.27
SMC1YFL008W RFC2P40348 353 aa0.85□□□□□ -2.27
SMC1YFL008W YNL320WP42840 284 aa0.85□□□□□ -2.27
SMC1YFL008W YFR045WP43617 309 aa0.85□□□□□ -2.27
SMC1YFL008W YFR057WP43625 151 aa0.85□□□□□ -2.27
SMC1YFL008W AIP1P46680 615 aaKnown RBP0.85□□□□□ -2.27
SMC1YFL008W YHC3P47040 408 aa0.85□□□□□ -2.27
SMC1YFL008W IRC18P47056 224 aa0.85□□□□□ -2.27
SMC1YFL008W DIE2P50076 525 aa0.85□□□□□ -2.27
SMC1YFL008W AIF1P52923 378 aa0.85□□□□□ -2.27
SMC1YFL008W TPN1P53099 579 aa0.85□□□□□ -2.27
SMC1YFL008W YGR039WP53225 103 aa0.85□□□□□ -2.27
Retrieved 100 of 5,963 RNA–protein pairs in 11.3 ms